CB293712
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293712 vs. ExPASy Swiss-Prot
Match: UCRI_GORGO (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Gorilla gorilla gorilla GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.096e-36 Identity = 61/101 (60.40%), Postives = 84/101 (83.17%), Query Frame = -2 Query: 487 VFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPSNLEVPSYSFLDENKMLIG 789 +F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NAGDFGG++CPCHGSHYD SGRIR GPAP NLEVP+Y F ++ +++G Sbjct: 174 LFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274
BLAST of CB293712 vs. ExPASy Swiss-Prot
Match: UCRI_MOUSE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Mus musculus GN=Uqcrfs1 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.431e-36 Identity = 61/101 (60.40%), Postives = 84/101 (83.17%), Query Frame = -2 Query: 487 VFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPSNLEVPSYSFLDENKMLIG 789 +F+R RT+++I +V++ LRDPQ D +RVK PEW++++GVCTHLGC+P+ NAGDFGG++CPCHGSHYD SGRIRKGPAP NLEVP+Y F ++ +++G Sbjct: 174 LFVRHRTKKEIDQEAAVEVSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPAYEFTSDDVVVVG 274
BLAST of CB293712 vs. ExPASy Swiss-Prot
Match: UCRI_COLPO (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Colobus polykomos GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.431e-36 Identity = 61/101 (60.40%), Postives = 84/101 (83.17%), Query Frame = -2 Query: 487 VFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPSNLEVPSYSFLDENKMLIG 789 +F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NAGDFGG++CPCHGSHYD SGRIR GPAP NLEVP+Y F ++ +++G Sbjct: 174 LFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVVVG 274
BLAST of CB293712 vs. ExPASy Swiss-Prot
Match: UCRI_RAT (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus GN=Uqcrfs1 PE=1 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.870e-36 Identity = 62/101 (61.39%), Postives = 83/101 (82.18%), Query Frame = -2 Query: 487 VFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPSNLEVPSYSFLDENKMLIG 789 +F+R RT+++I +V++ LRDPQ D ERVK PEW++++GVCTHLGC+P+ NAGDFGG++CPCHGSHYD SGRIRKGPAP NLEVP+Y F + +++G Sbjct: 174 LFVRHRTKKEIDQEAAVEVSQLRDPQHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPTYEFTSGDVVVVG 274
BLAST of CB293712 vs. ExPASy Swiss-Prot
Match: UCRI_PONPY (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pongo pygmaeus GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.442e-36 Identity = 61/101 (60.40%), Postives = 83/101 (82.18%), Query Frame = -2 Query: 487 VFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPSNLEVPSYSFLDENKMLIG 789 +F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NAGDFGG++CPCHGSHYD SGRIR GPAP NLEVP Y F ++ +++G Sbjct: 174 LFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPIYEFTSDDMVIVG 274
BLAST of CB293712 vs. ExPASy Swiss-Prot
Match: UCRIL_HUMAN (Cytochrome b-c1 complex subunit Rieske-like protein 1 OS=Homo sapiens GN=UQCRFSL1 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.189e-36 Identity = 61/101 (60.40%), Postives = 83/101 (82.18%), Query Frame = -2 Query: 487 VFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPSNLEVPSYSFLDENKMLIG 789 +F+R RT+++IK +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NAGDFGG++CPCHGSHYD SGRIR GPA NLEVP+Y F ++ +++G Sbjct: 183 LFVRHRTQKEIKQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPATLNLEVPTYEFTSDDMVIVG 283
BLAST of CB293712 vs. ExPASy Swiss-Prot
Match: UCRI_CERAE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cercopithecus aethiops GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.439e-36 Identity = 61/101 (60.40%), Postives = 83/101 (82.18%), Query Frame = -2 Query: 487 VFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPSNLEVPSYSFLDENKMLIG 789 +F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NAGDFGG++CPCHGSHYD SGRIR GPAP NLEVP Y F ++ +++G Sbjct: 174 LFVRHRTQKEIEEEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPPYEFTGDDVVVVG 274
BLAST of CB293712 vs. ExPASy Swiss-Prot
Match: UCRI_RHORU (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodospirillum rubrum GN=petA PE=1 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.750e-34 Identity = 67/106 (63.21%), Postives = 80/106 (75.47%), Query Frame = -2 Query: 487 VFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNA-----GDFGGWFCPCHGSHYDISGRIRKGPAPSNLEVPSYSFLDENKMLIG 789 VF+R RT+++I +A +VD SLRDPQ D RV+ +WLV+VGVCTHLGCIPL GDF GWFCPCHGSHYD +GRIRKGPAP NL VP Y+F D+ +LIG Sbjct: 78 VFVRHRTQKEIVVARAVDPASLRDPQTDEARVQQAQWLVMVGVCTHLGCIPLGQKAGDPKGDFDGWFCPCHGSHYDSAGRIRKGPAPLNLPVPPYAFTDDTTVLIG 183
BLAST of CB293712 vs. ExPASy Swiss-Prot
Match: UCRI_RHOVI (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodopseudomonas viridis GN=petA PE=3 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 9.602e-33 Identity = 63/103 (61.17%), Postives = 77/103 (74.76%), Query Frame = -2 Query: 487 VFIRRRTEEDIKLANSVDLGSLRDPQQDAERVK--NPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPSNLEVPSYSFLDENKMLIG 789 +FIR RT ++I+ + D+G+L DPQ D+ RVK EWLVV CTHLGCIPL + GD+GGWFCPCHGS YD SGR+RKGPAP+NL VP Y F+D K+ IG Sbjct: 73 IFIRHRTAKEIQSEEAADVGALIDPQPDSARVKPGKAEWLVVYASCTHLGCIPLGHQGDWGGWFCPCHGSQYDASGRVRKGPAPTNLPVPPYEFVDNTKIRIG 175
BLAST of CB293712 vs. ExPASy Swiss-Prot
Match: UCRI_RICBR (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia bellii (strain RML369-C) GN=petA PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.269e-31 Identity = 58/103 (56.31%), Postives = 75/103 (72.82%), Query Frame = -2 Query: 487 VFIRRRTEEDIKLANSVDLGSLRDPQQDAERVK--NPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPSNLEVPSYSFLDENKMLIG 789 VFI RT + I A +V + L DP++D +RVK + WLV +G+CTHLGC+PL N GD+ GWFCPCHGS YD SGR+R+GPAP NL VP Y+F+ + K+ IG Sbjct: 84 VFITNRTPDKIAEARAVKMSELIDPEEDQDRVKAGHDNWLVTIGICTHLGCVPLANQGDYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTFISDKKIRIG 186 The following BLAST results are available for this feature:
BLAST of CB293712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293712 ID=CB293712; Name=CB293712; organism=Citrus sinensis; type=EST; length=790bpback to top |