CB293712
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293712 vs. ExPASy Swiss-Prot
Match: UCRI_RHOCA (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter capsulatus GN=petA PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.174e-30 Identity = 66/122 (54.10%), Postives = 82/122 (67.21%), Query Frame = -2 Query: 487 VFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNP--------------------EWLVVVGVCTHLGCIPLPN-AGDFGGWFCPCHGSHYDISGRIRKGPAPSNLEVPSYSFLDENKMLIG 789 VFIRRR E+DI+LA SV LG+LRD AE P EWLV++GVCTHLGC+P+ + +GDFGGWFCPCHGSHYD +GRIRKGPAP NL++P +F+DE + +G Sbjct: 72 VFIRRRDEKDIELARSVPLGALRDTS--AENANKPGAEATDENRTLPAFDGTNTGEWLVMLGVCTHLGCVPMGDKSGDFGGWFCPCHGSHYDSAGRIRKGPAPRNLDIPVAAFVDETTIKLG 191
BLAST of CB293712 vs. ExPASy Swiss-Prot
Match: UCRI_PARDE (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Paracoccus denitrificans GN=petA PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.174e-30 Identity = 64/115 (55.65%), Postives = 78/115 (67.83%), Query Frame = -2 Query: 487 VFIRRRTEEDIKLANSVDLGSLRD-----------PQQDAERVKNP--EWLVVVGVCTHLGCIPLPN-AGDFGGWFCPCHGSHYDISGRIRKGPAPSNLEVPSYSFLDENKMLIG 789 VFIRRRTE++I+ VDLG L D P D R + EWLV++GVCTHLGC+P+ + AGDFGGWFCPCHGSHYD SGRIR+GPAP NL +P FLD+ + +G Sbjct: 76 VFIRRRTEDEIQAGREVDLGQLIDRSAQNSNKPDAPATDENRTMDEAGEWLVMIGVCTHLGCVPIGDGAGDFGGWFCPCHGSHYDTSGRIRRGPAPQNLHIPVAEFLDDTTIKLG 190
BLAST of CB293712 vs. ExPASy Swiss-Prot
Match: UCRI_RICPR (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia prowazekii GN=petA PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.460e-30 Identity = 56/103 (54.37%), Postives = 74/103 (71.84%), Query Frame = -2 Query: 487 VFIRRRTEEDIKLANSVDLGSLRDPQQDAERVK--NPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPSNLEVPSYSFLDENKMLIG 789 +FI RT ++I A +V + L DP++D RVK + WLV +G+CTHLGC+PL + G++ GWFCPCHGS YD SGR+RKGPAP NL VP Y F+ + K+ IG Sbjct: 75 IFITNRTHDEIAAARAVKMSELIDPERDEVRVKAGHDNWLVTIGICTHLGCVPLSHKGEYNGWFCPCHGSQYDSSGRVRKGPAPLNLAVPPYIFISDKKIRIG 177
BLAST of CB293712 vs. ExPASy Swiss-Prot
Match: UCRI_RICFE (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia felis GN=petA PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 7.608e-30 Identity = 57/103 (55.34%), Postives = 73/103 (70.87%), Query Frame = -2 Query: 487 VFIRRRTEEDIKLANSVDLGSLRDPQQDAERVK--NPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPSNLEVPSYSFLDENKMLIG 789 VFI RT + I A +V + L DP+ D RVK + WLV +G+CTHLGC+PL N G++ GWFCPCHGS YD SGR+R+GPAP NL VP Y+F+ + K+ IG Sbjct: 75 VFITNRTPDKIAEARAVKMSELIDPETDEARVKAGHDNWLVTIGICTHLGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTFISDKKIRIG 177
BLAST of CB293712 vs. ExPASy Swiss-Prot
Match: UCRI_RICCN (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia conorii GN=petA PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 7.608e-30 Identity = 57/103 (55.34%), Postives = 73/103 (70.87%), Query Frame = -2 Query: 487 VFIRRRTEEDIKLANSVDLGSLRDPQQDAERVK--NPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPSNLEVPSYSFLDENKMLIG 789 VFI RT + I A +V + L DP+ D RVK + WLV +G+CTHLGC+PL N G++ GWFCPCHGS YD SGR+R+GPAP NL VP Y+F+ + K+ IG Sbjct: 75 VFITNRTPDKIAEARAVKMSELIDPEADQARVKAGHDNWLVTIGICTHLGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTFISDKKIRIG 177
BLAST of CB293712 vs. ExPASy Swiss-Prot
Match: UCRI_BRAJA (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Bradyrhizobium japonicum GN=petA PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.298e-29 Identity = 57/103 (55.34%), Postives = 78/103 (75.73%), Query Frame = -2 Query: 487 VFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKN--PEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPSNLEVPSYSFLDENKMLIG 789 ++I RT++ I A +V++ SL DPQ D RVK+ +WLVV+G+CTHLGCIP+ + G++ G+FCPCHGS YD SGRIR+GPAP+NL VP Y F+ + K+ IG Sbjct: 74 IYISHRTKKQIDEARAVNVASLPDPQSDEARVKSGHEQWLVVIGICTHLGCIPIAHEGNYDGFFCPCHGSQYDSSGRIRQGPAPANLPVPPYQFVSDTKIQIG 176
BLAST of CB293712 vs. ExPASy Swiss-Prot
Match: UCRI_RICTY (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia typhi GN=petA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.931e-29 Identity = 56/103 (54.37%), Postives = 72/103 (69.90%), Query Frame = -2 Query: 487 VFIRRRTEEDIKLANSVDLGSLRDPQQDAERVK--NPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPSNLEVPSYSFLDENKMLIG 789 +FI RT + I A +V + L DP++D RVK + WLV +G+CTHLGC+PL N G++ GWFCPCHGS YD SGR+RKGPA NL VP Y F+ + K+ IG Sbjct: 75 IFITNRTPDGIASARAVKMSELIDPEKDEVRVKAGHDNWLVTIGICTHLGCVPLSNQGEYNGWFCPCHGSQYDSSGRVRKGPASLNLVVPPYIFISDTKIRIG 177
BLAST of CB293712 vs. ExPASy Swiss-Prot
Match: UCRI_RHOSH (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter sphaeroides GN=petA PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.099e-28 Identity = 63/116 (54.31%), Postives = 75/116 (64.66%), Query Frame = -2 Query: 487 VFIRRRTEEDIKLANSVDLGSLRDPQQ------------DAERVKNP--EWLVVVGVCTHLGCIPLPN-AGDFGGWFCPCHGSHYDISGRIRKGPAPSNLEVPSYSFLDENKMLIG 789 +FIRRRTE DI+L SV LG L D D R + EWLV+ GVCTHLGC+P+ +GDFGGWFCPCHGSHYD +GRIRKGPAP NL +P F+DE + +G Sbjct: 72 IFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGSHYDSAGRIRKGPAPENLPIPLAKFIDETTIQLG 187
BLAST of CB293712 vs. ExPASy Swiss-Prot
Match: UCRI_CHRVI (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Chromatium vinosum GN=petA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.954e-13 Identity = 45/121 (37.19%), Postives = 67/121 (55.37%), Query Frame = -2 Query: 487 VFIRRRTEEDIKLANSVDLGSLRDPQ----QDAERVKNP------EWLVVVGVCTHLGCIPL---------PNAGDFGGWFCPCHGSHYDISGRIRKG-PAPSNLEVPSYSFLDENKMLIG 789 V++ R+ E + +S D L DP Q + KNP E+LV +G+CTHLGC P +G GG+ CPCHGS +D++ R+ K PAP+NL +P + +L++ +LIG Sbjct: 82 VWVVHRSSEMLAALSSND-PKLVDPTSEVPQQPDYCKNPTRSIKPEYLVAIGICTHLGCSPTYRPEFGPDDLGSGWKGGFHCPCHGSRFDLAARVFKNVPAPTNLVIPKHVYLNDTTILIG 201 The following BLAST results are available for this feature:
BLAST of CB293712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB293712 ID=CB293712; Name=CB293712; organism=Citrus sinensis; type=EST; length=790bpback to top |