CB293713
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293713 vs. ExPASy Swiss-Prot
Match: UCRI_BOVIN (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Bos taurus GN=UQCRFS1 PE=1 SV=3) HSP 1 Score: 166.777 bits (421), Expect = 1.302e-40 Identity = 72/138 (52.17%), Postives = 100/138 (72.46%), Query Frame = 1 Query: 394 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDIS 807 +++ F+Y V A + ++ +FV SMSAS DVLAM+ +E+ LS I G + KWRGKP+F+R RT+++I +V++ LRDPQ D ERVK PEW++++GVCTHLGC+P+ NAGDFGG++CPCHGSHYD S Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDAS 246
BLAST of CB293713 vs. ExPASy Swiss-Prot
Match: UCRI_PANTR (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pan troglodytes GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.700e-40 Identity = 72/138 (52.17%), Postives = 100/138 (72.46%), Query Frame = 1 Query: 394 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDIS 807 +++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + KWRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NAGDFGG++CPCHGSHYD S Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDAS 246
BLAST of CB293713 vs. ExPASy Swiss-Prot
Match: UCRI_PANPA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pan paniscus GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.700e-40 Identity = 72/138 (52.17%), Postives = 100/138 (72.46%), Query Frame = 1 Query: 394 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDIS 807 +++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + KWRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NAGDFGG++CPCHGSHYD S Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDAS 246
BLAST of CB293713 vs. ExPASy Swiss-Prot
Match: UCRI_HUMAN (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Homo sapiens GN=UQCRFS1 PE=1 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 1.700e-40 Identity = 72/138 (52.17%), Postives = 100/138 (72.46%), Query Frame = 1 Query: 394 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDIS 807 +++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + KWRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NAGDFGG++CPCHGSHYD S Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDAS 246
BLAST of CB293713 vs. ExPASy Swiss-Prot
Match: UCRI_GORGO (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Gorilla gorilla gorilla GN=UQCRFS1 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.700e-40 Identity = 72/138 (52.17%), Postives = 100/138 (72.46%), Query Frame = 1 Query: 394 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDIS 807 +++ F+Y V A + + +FV SMSAS DVLA+A +E+ LS I G + KWRGKP+F+R RT+++I+ +V+L LRDPQ D +RVK PEW++++GVCTHLGC+P+ NAGDFGG++CPCHGSHYD S Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDAS 246
BLAST of CB293713 vs. ExPASy Swiss-Prot
Match: UCRI_RAT (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus GN=Uqcrfs1 PE=1 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 2.221e-40 Identity = 72/138 (52.17%), Postives = 99/138 (71.74%), Query Frame = 1 Query: 394 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDIS 807 +++ F+Y V A + + +FV SMSAS DVLAM+ +E+ LS I G + KWRGKP+F+R RT+++I +V++ LRDPQ D ERVK PEW++++GVCTHLGC+P+ NAGDFGG++CPCHGSHYD S Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNAVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDAS 246
BLAST of CB293713 vs. ExPASy Swiss-Prot
Match: UCRI_MOUSE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Mus musculus GN=Uqcrfs1 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.900e-40 Identity = 71/138 (51.45%), Postives = 100/138 (72.46%), Query Frame = 1 Query: 394 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDIS 807 +++ F+Y V A + ++ +FV SMSAS DVLAM+ +E+ LS I G + KWRGKP+F+R RT+++I +V++ LRDPQ D +RVK PEW++++GVCTHLGC+P+ NAGDFGG++CPCHGSHYD S Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDAS 246
BLAST of CB293713 vs. ExPASy Swiss-Prot
Match: UCRI_RHORU (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodospirillum rubrum GN=petA PE=1 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.759e-37 Identity = 79/153 (51.63%), Postives = 99/153 (64.71%), Query Frame = 1 Query: 358 EYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPN-----AGDFGGWFCPCHGSHYD 801 E H PG S R F++ G V A + L + F+ M+ + D LA+AS EVD+S+I G +TV WRGKPVF+R RT+++I +A +VD SLRDPQ D RV+ +WLV+VGVCTHLGCIPL GDF GWFCPCHGSHYD Sbjct: 3 EAEHTASTPGGESSRRD--FLIYGTTAVGAVGVALAVWPFIDFMNPAADTLALASTEVDVSAIAEGQAITVTWRGKPVFVRHRTQKEIVVARAVDPASLRDPQTDEARVQQAQWLVMVGVCTHLGCIPLGQKAGDPKGDFDGWFCPCHGSHYD 153
BLAST of CB293713 vs. ExPASy Swiss-Prot
Match: UCRI_RICBR (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia bellii (strain RML369-C) GN=petA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.394e-34 Identity = 73/153 (47.71%), Postives = 97/153 (63.40%), Query Frame = 1 Query: 355 DEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVK--NPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDIS 807 D N + D SK + F++ V A + + S++ S DVLA++S+EVDLS+I G TVTVKW+GKPVFI RT + I A +V + L DP++D +RVK + WLV +G+CTHLGC+PL N GD+ GWFCPCHGS YD S Sbjct: 6 DTNNDNKVEFEDRSKTSRRDFMVLTASSVAAVGAACTLWPLINSLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEEDQDRVKAGHDNWLVTIGICTHLGCVPLANQGDYDGWFCPCHGSQYDSS 158
BLAST of CB293713 vs. ExPASy Swiss-Prot
Match: UCRI_PARDE (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Paracoccus denitrificans GN=petA PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.298e-34 Identity = 74/152 (48.68%), Postives = 95/152 (62.50%), Query Frame = 1 Query: 394 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRD-----------PQQDAERVKNP--EWLVVVGVCTHLGCIPL-PNAGDFGGWFCPCHGSHYDIS 807 ++R F Y+ G V A ++ M+ S DV A+AS++VD+S +E G+ +TVKW GKPVFIRRRTE++I+ VDLG L D P D R + EWLV++GVCTHLGC+P+ AGDFGGWFCPCHGSHYD S Sbjct: 14 TRRDFLYYATAGAGTVAAGAAAWTLVN---QMNPSADVQALASIQVDVSGVETGTQLTVKWLGKPVFIRRRTEDEIQAGREVDLGQLIDRSAQNSNKPDAPATDENRTMDEAGEWLVMIGVCTHLGCVPIGDGAGDFGGWFCPCHGSHYDTS 162 The following BLAST results are available for this feature:
BLAST of CB293713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293713 ID=CB293713; Name=CB293713; organism=Citrus sinensis; type=EST; length=807bpback to top |