CB293718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293718 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.570e-32 Identity = 66/73 (90.41%), Postives = 69/73 (94.52%), Query Frame = -2 Query: 38 SCDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGLFVQAIVTGKGPLEKLADHLDDPVHNNAWAFATNFVPGK 256 S DPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG FVQAIVTGKGP+E LADHL DPV+NNAWA+ATNFVPGK Sbjct: 202 SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274
BLAST of CB293718 vs. ExPASy Swiss-Prot
Match: CB2D_SOLLC (Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.051e-32 Identity = 66/73 (90.41%), Postives = 69/73 (94.52%), Query Frame = -2 Query: 38 SCDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGLFVQAIVTGKGPLEKLADHLDDPVHNNAWAFATNFVPGK 256 S DPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG FVQAIVTGKGPLE LADHL DPV+NNAW++ATNFVPGK Sbjct: 44 SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 116
BLAST of CB293718 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.051e-32 Identity = 66/73 (90.41%), Postives = 69/73 (94.52%), Query Frame = -2 Query: 38 SCDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGLFVQAIVTGKGPLEKLADHLDDPVHNNAWAFATNFVPGK 256 S DPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG FVQAIVTGKGPLE LADHL DPV+NNAW++ATNFVPGK Sbjct: 195 SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
BLAST of CB293718 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 2.051e-32 Identity = 66/73 (90.41%), Postives = 69/73 (94.52%), Query Frame = -2 Query: 38 SCDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGLFVQAIVTGKGPLEKLADHLDDPVHNNAWAFATNFVPGK 256 S DPLGLA+DPEAFAELKVKEIKNGRLAMFSMFG FVQAIVTGKGPLE LADHL DPV+NNAWA+ATNFVPGK Sbjct: 189 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 261
BLAST of CB293718 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.051e-32 Identity = 66/73 (90.41%), Postives = 69/73 (94.52%), Query Frame = -2 Query: 38 SCDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGLFVQAIVTGKGPLEKLADHLDDPVHNNAWAFATNFVPGK 256 S DPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG FVQAIVTGKGPLE LADHL DPV+NNAW++ATNFVPGK Sbjct: 194 SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266
BLAST of CB293718 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.051e-32 Identity = 67/73 (91.78%), Postives = 68/73 (93.15%), Query Frame = -2 Query: 38 SCDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGLFVQAIVTGKGPLEKLADHLDDPVHNNAWAFATNFVPGK 256 S DPLGLA DPEAFAELKVKEIKNGRLAMFSMFG FVQAIVTGKGPLE LADHL DPV+NNAWAFATNFVPGK Sbjct: 194 SFDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
BLAST of CB293718 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 2.679e-32 Identity = 66/73 (90.41%), Postives = 69/73 (94.52%), Query Frame = -2 Query: 38 SCDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGLFVQAIVTGKGPLEKLADHLDDPVHNNAWAFATNFVPGK 256 S DPLGLA+DPEAFAEL+VKEIKNGRLAMFSMFG FVQAIVTGKGPLE LADHL DPV+NNAWAFATNFVPGK Sbjct: 194 SFDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
BLAST of CB293718 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 3.498e-32 Identity = 65/73 (89.04%), Postives = 69/73 (94.52%), Query Frame = -2 Query: 38 SCDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGLFVQAIVTGKGPLEKLADHLDDPVHNNAWAFATNFVPGK 256 S DPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG FVQA+VTGKGPLE LADHL DPV+NNAW++ATNFVPGK Sbjct: 194 SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266
BLAST of CB293718 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 3.498e-32 Identity = 65/73 (89.04%), Postives = 69/73 (94.52%), Query Frame = -2 Query: 38 SCDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGLFVQAIVTGKGPLEKLADHLDDPVHNNAWAFATNFVPGK 256 S DPLGLA+DPEAFAELKVKE+KNGRLAMFSMFG FVQAIVTGKGPLE LADHL DPV+NNAWA+ATNFVPGK Sbjct: 134 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 206
BLAST of CB293718 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 3.498e-32 Identity = 65/71 (91.55%), Postives = 68/71 (95.77%), Query Frame = -2 Query: 38 DPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGLFVQAIVTGKGPLEKLADHLDDPVHNNAWAFATNFVPGK 250 DPLGLA+DPEAFAELKVKEIKNGRLAMFSMFG FVQAIVTGKGPLE LADHL DPV+NNAWA+ATNFVPGK Sbjct: 195 DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265 The following BLAST results are available for this feature:
BLAST of CB293718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293718 ID=CB293718; Name=CB293718; organism=Citrus sinensis; type=EST; length=263bpback to top |