CB293718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293718 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.598e-31 Identity = 61/71 (85.92%), Postives = 68/71 (95.77%), Query Frame = -2 Query: 38 DPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGLFVQAIVTGKGPLEKLADHLDDPVHNNAWAFATNFVPGK 250 DPLGLA+DP+AFA++KVKEIKNGRLAMFSMFG FVQAIVTGKGP+E LADHL DPV+NNAWA+ATNFVPGK Sbjct: 208 DPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278
BLAST of CB293718 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.598e-31 Identity = 63/71 (88.73%), Postives = 66/71 (92.96%), Query Frame = -2 Query: 38 DPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGLFVQAIVTGKGPLEKLADHLDDPVHNNAWAFATNFVPGK 250 DPLGLA+DPEAFAELKVKEIKNGRLAMFSMFG FVQAIVTGKGP+E L DH+ DPV NNAWAFATNFVPGK Sbjct: 195 DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANNAWAFATNFVPGK 265
BLAST of CB293718 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.125e-30 Identity = 63/73 (86.30%), Postives = 67/73 (91.78%), Query Frame = -2 Query: 38 SCDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGLFVQAIVTGKGPLEKLADHLDDPVHNNAWAFATNFVPGK 256 S DPLGLAEDPEAFAELKVKE KNGRLAMFSMFG F+QAIVTGKGPLE LADHL DPV+NNAW++ATNFVP K Sbjct: 195 SFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVNNNAWSYATNFVPRK 267
BLAST of CB293718 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.470e-30 Identity = 62/71 (87.32%), Postives = 66/71 (92.96%), Query Frame = -2 Query: 38 DPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGLFVQAIVTGKGPLEKLADHLDDPVHNNAWAFATNFVPGK 250 DPLGLA+DPEAFAELKVKEIKNGRLAMFSMFG FVQAIVTGKGP+E L DH+ DPV NNAWA+ATNFVPGK Sbjct: 195 DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 265
BLAST of CB293718 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 1.470e-30 Identity = 62/71 (87.32%), Postives = 66/71 (92.96%), Query Frame = -2 Query: 38 DPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGLFVQAIVTGKGPLEKLADHLDDPVHNNAWAFATNFVPGK 250 DPLGLA+DP+AFAELKVKEIKNGRLAMFSMFG FVQAIVTGKGP+E L DHL DPV NNAWA+ATNFVPGK Sbjct: 195 DPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWAYATNFVPGK 265
BLAST of CB293718 vs. ExPASy Swiss-Prot
Match: CB21_RAPSA (Chlorophyll a-b binding of LHCII type 1 protein (Fragment) OS=Raphanus sativus PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.920e-30 Identity = 64/73 (87.67%), Postives = 65/73 (89.04%), Query Frame = -2 Query: 38 SCDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGLFVQAIVTGKGPLEKLADHLDDPVHNNAWAFATNFVPGK 256 S DPL DPEAFAELKVKEIKNGRLAMFSMFG FVQAIVTGKGPLE LADHL DPV+NNAWAFATNFVPGK Sbjct: 52 SFDPLASLTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 124
BLAST of CB293718 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.920e-30 Identity = 63/73 (86.30%), Postives = 67/73 (91.78%), Query Frame = -2 Query: 38 SCDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGLFVQAIVTGKGPLEKLADHLDDPVHNNAWAFATNFVPGK 256 S DPLGLAE PEAFAELKVKE+KNGRLAMFSMFG FV AIVTGKGPLE LADHL DPV+NNAW++ATNFVPGK Sbjct: 156 SFDPLGLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 228
BLAST of CB293718 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 3.274e-30 Identity = 61/73 (83.56%), Postives = 66/73 (90.41%), Query Frame = -2 Query: 38 SCDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGLFVQAIVTGKGPLEKLADHLDDPVHNNAWAFATNFVPGK 256 S DPLGLA+DPEAFAELKVKE+KNGRLAMFSMFG FVQAIVTGKGP+E L+DHL DP NNAWA+ATNF PGK Sbjct: 193 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNNAWAYATNFTPGK 265
BLAST of CB293718 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 3.274e-30 Identity = 63/73 (86.30%), Postives = 66/73 (90.41%), Query Frame = -2 Query: 38 SCDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGLFVQAIVTGKGPLEKLADHLDDPVHNNAWAFATNFVPGK 256 S DPLGLAE P+AFAELKVKEIKNGRLAMFSMFG FVQAIVTGKGPLE LADH+ DPV+NNAW ATNFVPGK Sbjct: 194 SFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNNAWLIATNFVPGK 266
BLAST of CB293718 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 4.277e-30 Identity = 61/73 (83.56%), Postives = 66/73 (90.41%), Query Frame = -2 Query: 38 SCDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGLFVQAIVTGKGPLEKLADHLDDPVHNNAWAFATNFVPGK 256 S DPLGLA+DPEAF ELKVKE+K GRLAM SMFG FVQAIVTGKGPLE LADH+ DPV+NNAWA+ATNFVPGK Sbjct: 193 SFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGK 265 The following BLAST results are available for this feature:
BLAST of CB293718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293718 ID=CB293718; Name=CB293718; organism=Citrus sinensis; type=EST; length=263bpback to top |