CB293733
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293733 vs. ExPASy Swiss-Prot
Match: RL2_THEPD (50S ribosomal protein L2P OS=Thermofilum pendens (strain Hrk 5) GN=rpl2p PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.417e-37 Identity = 91/206 (44.17%), Postives = 125/206 (60.68%), Query Frame = 3 Query: 48 MGRVIRAQRKG-AGSVFKSHTHHRKGPARFRSLDFGE-RNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFKVKRNCWPKVRGVAM 659 MG+ + QR+G GSVF++ R GPAR+ + E +N L GV+ +++H+PGRGAPLA V F K + EG+ GQ +Y G KA V+G+++ + ++PEG +V N+E GD G AR SG YA+V++H+ N T I+LPS K V S RA IG VA GGR EKP+LKAG +H + K +P VRG AM Sbjct: 1 MGKRLLVQRRGRGGSVFRNPGWKRLGPARYPPYNPEEFKNKVLVGVVKDLLHEPGRGAPLALVEFE-----DGTKMYMIPPEGLAVGQKIYYGAKAPAVLGSIVEIGNVPEGTIVSNIEIRPGDGGKLARSSGAYALVLAHS--NGKTLIQLPSKKVKEVSSEARATIGMVAAGGRIEKPMLKAGKMWHWSRAKSFKYPTVRGKAM 199
BLAST of CB293733 vs. ExPASy Swiss-Prot
Match: RL2_HYPBU (50S ribosomal protein L2P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl2p PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.417e-37 Identity = 91/206 (44.17%), Postives = 122/206 (59.22%), Query Frame = 3 Query: 48 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFV-AAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFKVKRNCWPKVRGVAM 659 MG+ + QR+G GS +++S PAR+ L L+G + E++HDPGR PLA + ++ E ++ AAEGMY GQ + G A V GN+LP+ IPEG V N+E GD G R G YA+++ + + T I+LPSG K VP+ RA IG VAG GR EKPLLKAG AY+K+ K + WP+VRGVAM Sbjct: 1 MGKRLIVQRRGKGSPLYRSRPWLHPAPARYPPLT----PVTLRGRVVELVHDPGRWVPLAHIVL------ENGDEFYIPAAEGMYVGQIIEIGPDARPVNGNILPVGKIPEGTQVYNIEIRPGDGGKLVRAYGTYAIILGRS--GNKTIIQLPSGKVKEVPNDARATIGIVAGAGRLEKPLLKAGAAYYKWSAKPHVWPRVRGVAM 194
BLAST of CB293733 vs. ExPASy Swiss-Prot
Match: RL2_THEON (50S ribosomal protein L2P OS=Thermococcus onnurineus (strain NA1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.033e-37 Identity = 86/205 (41.95%), Postives = 122/205 (59.51%), Query Frame = 3 Query: 48 MGRVIRAQRKGAGSV-FKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFKVKRNCWPKVRGVAM 659 MG+ + QR+G G+ F++ +H +G R+ L+ + L G + EI+HDPGR AP+ARV F + ++L +A EG+ G+ + G A + +GN LPL IPEG+ V ++E GD G + R G YA+V+S + D ++LPSG K CRA IG VAGGGR EKP++KAG AY+ K + WPK RGV M Sbjct: 1 MGKSLIQQRRGKGTTTFRAPSHRYRGAVRYVPLNLTKEKT-LVGKVVEILHDPGRTAPVARVKFENGM-----EKLIIAPEGILVGEEIAIGPNAPIKIGNTLPLAMIPEGSYVYDIEGTPGDGGKYVRAGGVYALVVSR--EKDKVIVQLPSGELKQFNPMCRATIGVVAGGGRLEKPIVKAGKAYYIAKARNRFWPKPRGVKM 197
BLAST of CB293733 vs. ExPASy Swiss-Prot
Match: RL2_CALMQ (50S ribosomal protein L2P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl2p PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.567e-36 Identity = 88/206 (42.72%), Postives = 121/206 (58.74%), Query Frame = 3 Query: 48 MGRVIRAQRKG-AGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFV-AAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFKVKRNCWPKVRGVAM 659 MG+ I QR G GS F+S + R P R+ + ++G+I E++H G AP V ++ +E+++ A EG+Y G+ + G A + GNV+P+ IPEG +VCN+E VGD G +AR SG Y VV+ H + TT ++LPSG V S RA IG VAGGGR EKP +KAGN YH+ + K +PKVRG AM Sbjct: 1 MGKKILVQRAGRGGSQFRSPSWRRIAPLRYVQFSEEQLKTTIRGIIKELVHVTGLNAPAMHVVL------ENGEEMYLPAVEGVYVGKIIEFGPDAKVEPGNVMPIGKIPEGTMVCNIEKRVGDGGKYARSSGTYGVVMIHR--DSTTLVQLPSGRMIEVDSRARATIGIVAGGGRIEKPFVKAGNKYHRARTKAWKYPKVRGKAM 198
BLAST of CB293733 vs. ExPASy Swiss-Prot
Match: RL2_THENV (50S ribosomal protein L2P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl2p PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.016e-35 Identity = 87/205 (42.44%), Postives = 118/205 (57.56%), Query Frame = 3 Query: 48 MGRVIRAQRKG-AGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFKVKRNCWPKVRGVAM 659 MG+ I QR+G GS F+S + R+GP R+ L R G + +IIH PG AP+A++ + + L AAEG+Y GQ + G A+ GNV+ L PEG +V NVE GD G FAR G YAVV+ P+ + T ++LPSG V + RA +G VAGGGR EKP++KAG Y++ + K +P VRG AM Sbjct: 1 MGKRILVQRRGRGGSQFRSPSWRREGPVRYPPLGTAGR-----GYVVDIIHVPGLNAPVAKIRLENGLEF-----LNYAAEGLYVGQEIEIGEAASPKTGNVVVLGKAPEGTMVFNVEKRPGDGGKFARSGGTYAVVVGQKPEENKTIVRLPSGRTMEVDARGRATVGLVAGGGRIEKPMVKAGKKYYRARAKAWKYPLVRGKAM 195
BLAST of CB293733 vs. ExPASy Swiss-Prot
Match: RL2_METMA (50S ribosomal protein L2P OS=Methanosarcina mazei GN=rpl2p PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.326e-35 Identity = 81/206 (39.32%), Postives = 123/206 (59.71%), Query Frame = 3 Query: 48 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFV-AAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFKVKRNCWPKVRGVAM 659 MG+ + +Q +G G+ +++ +H K R +D N L+G + +I HDP R AP+A+V F ++ +ELF+ A+EG+ G + CG A + GN++P+ ++PEG +CN+E D G F R SG YA V++H P T + +PSG K + CRA++G VAGGGR ++P LKAG YHK K + +P+V VAM Sbjct: 1 MGKRLISQNRGRGTPTYRAPSHKYKADLRHPRVD---ENTSLQGEVIDIEHDPARSAPIAKVAF------ENGEELFLLASEGVAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNIESKPNDGGKFVRSSGVYATVVTHEPTR--TAVSMPSGNIKWLNPKCRAVVGIVAGGGRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAM 195
BLAST of CB293733 vs. ExPASy Swiss-Prot
Match: RL2_METBF (50S ribosomal protein L2P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl2p PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.598e-35 Identity = 78/205 (38.05%), Postives = 121/205 (59.02%), Query Frame = 3 Query: 48 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFKVKRNCWPKVRGVAM 659 MG+ I +Q +G G+ +++ +H K R +D N ++G + + HDP R AP+A+V F ++ L +A+EG+ G + CG A + GN++P+ +PEG +CN+E D G F R SG YA V++H +++ T + +PSG K + CRA++G VAGGGR ++P LKAG YHK K + +P+V GVAM Sbjct: 1 MGKRIISQNRGRGTPTYRAPSHKYKAELRHPRVD---ENTSIQGKVINLEHDPARSAPIAKVVFE-----TGEERLLLASEGIAVGSTIECGDDADVRPGNIVPIGKVPEGFFICNIESKPNDGGRFVRSSGVYATVVTH--ESNRTAVAMPSGNIKWLNPKCRAVVGIVAGGGRVDRPWLKAGKKYHKMKTRAAKYPRVSGVAM 195
BLAST of CB293733 vs. ExPASy Swiss-Prot
Match: RL2_METAC (50S ribosomal protein L2P OS=Methanosarcina acetivorans GN=rpl2p PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.267e-34 Identity = 80/206 (38.83%), Postives = 121/206 (58.74%), Query Frame = 3 Query: 48 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFV-AAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFKVKRNCWPKVRGVAM 659 MG+ + +Q +G G+ +++ +H K R +D N L+G + I HDP R AP+A+V F ++ +ELF+ A+EG+ G + CG A + GN++P+ ++PEG +CNVE D G F R SG YA V++H + T + +PSG K + CRA++G VAG GR ++P LKAG YHK K + +P+V VAM Sbjct: 1 MGKRLISQNRGRGTPTYRAPSHKYKADLRHPRVD---ENSSLRGEVVGIEHDPARSAPIAKVAF------ENGEELFLLASEGIAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESKPNDGGKFVRSSGVYATVVTH--EATRTAVSMPSGNIKWLNPKCRAVVGIVAGSGRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAM 195
BLAST of CB293733 vs. ExPASy Swiss-Prot
Match: RL2_SULIY (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.573e-34 Identity = 85/205 (41.46%), Postives = 119/205 (58.05%), Query Frame = 3 Query: 48 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFKVKRNCWPKVRGVAM 659 MG+ + QR G GS F+S + R G R+ ++ G+L G + +I+H+PG AP+A + + ++ Q A +G+ Q + G+ + + GNV+ + PEG +VCNVE + GD G +AR +G YAVV+ + D IKLPS K V + RA +G VAGGG EKPLLKAG Y K+KVK WP VRGVAM Sbjct: 1 MGKNLLQQRAGKGSPTFRSPSWLRIGKVRYPNIF-----GHLVGKVIDIVHNPGMNAPVAIIKLENGTKFLTQ-----AIQGLVINQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEENFGDGGKYARSAGSYAVVVGKS--GDKVLIKLPSDKIKAVSNKARATVGVVAGGGVVEKPLLKAGANYWKYKVKAKKWPIVRGVAM 193
BLAST of CB293733 vs. ExPASy Swiss-Prot
Match: RL2_SULIM (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.573e-34 Identity = 85/205 (41.46%), Postives = 119/205 (58.05%), Query Frame = 3 Query: 48 MGRVIRAQRKGAGS-VFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFKVKRNCWPKVRGVAM 659 MG+ + QR G GS F+S + R G R+ ++ G+L G + +I+H+PG AP+A + + ++ Q A +G+ Q + G+ + + GNV+ + PEG +VCNVE + GD G +AR +G YAVV+ + D IKLPS K V + RA +G VAGGG EKPLLKAG Y K+KVK WP VRGVAM Sbjct: 1 MGKNLLQQRAGKGSPTFRSPSWLRIGKVRYPNIF-----GHLVGKVIDIVHNPGMNAPVAIIKLENGTKFLTQ-----AIQGLVINQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEENFGDGGKYARSAGSYAVVVGKS--GDKVLIKLPSDKIKAVSNKARATVGVVAGGGVVEKPLLKAGANYWKYKVKAKKWPIVRGVAM 193 The following BLAST results are available for this feature:
BLAST of CB293733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293733 ID=CB293733; Name=CB293733; organism=Citrus sinensis; type=EST; length=712bpback to top |