CB293760

Overview
NameCB293760
Unique NameCB293760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293760 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.499e-23
Identity = 53/101 (52.48%), Postives = 68/101 (67.33%), Query Frame = -1
Query:  551 IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 853
            I  Y+ VP NDE +L +A+ANQPVSV  +  G  FQ Y+ GI+ G CGT+ DH VTAVGY    G  Y ++KNSWG +WGE GYIR++R  +G   G CG+
Sbjct:  107 ITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTNTDHAVTAVGY----GKTYLLLKNSWGPNWGEKGYIRIKR-ASGRSKGTCGV 202          
BLAST of CB293760 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.570e-23
Identity = 57/99 (57.58%), Postives = 70/99 (70.71%), Query Frame = -1
Query:  533 EKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGR-CG-TSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 820
            E+ALQ+AV+   P+SVAI+    +FQ Y SG++  + C  T LDHGV AVGYGTE+  DYW+VKNSWGSSWG+AGYI+M RN        CGIA E SY
Sbjct:  224 EEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYGTESTKDYWLVKNSWGSSWGDAGYIKMSRN----RDNNCGIASEPSY 318          
BLAST of CB293760 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.737e-22
Identity = 56/108 (51.85%), Postives = 73/108 (67.59%), Query Frame = -1
Query:  533 YEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTG-RCGT-SLDHGVTAVGYGT-ENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 844
            + D+P  DE+ ++KAVA   PVSVAI+    +FQLY  G++    C   +LDHGV  VGYGT E+G DYW+VKNSWG++WGE GYI+M RN       +CGIA  +SY
Sbjct:  233 FVDIPEGDEEKMKKAVATMGPVSVAIDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKNSWGTTWGEQGYIKMARN----QNNQCGIATASSY 336          
BLAST of CB293760 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.126e-21
Identity = 52/109 (47.71%), Postives = 71/109 (65.14%), Query Frame = -1
Query:  533 IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSL-DHGVTAVGYGTENG-ADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 853
            I+ +E VP+NDE +L+KAVA QP+SV I    M+   Y+SG++ G C     DH V  VGYGT +   DYW+++NSWG  WGE GY+R++RN     TGKC +A+   Y
Sbjct:  239 INGHEVVPVNDEMSLKKAVAYQPISVMISAANMSD--YKSGVYKGACSNLWGDHNVLIVGYGTSSDEGDYWLIRNSWGPEWGEGGYLRLQRNFHEP-TGKCAVAVAPVY 344          
BLAST of CB293760 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.920e-21
Identity = 55/109 (50.46%), Postives = 68/109 (62.39%), Query Frame = -1
Query:  533 IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTS--LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 853
            I  Y+++   DE  LQ A+   PVSVAI+    +FQLY +G++     +S  LDHGV AVG GT+NG DY+IVKNSWG SWG  GYI M RN        CGI+  ASY
Sbjct:  230 ITSYKEIEAGDENDLQNALLLNPVSVAIDASHNSFQLYTAGVYYEPACSSEDLDHGVLAVGMGTDNGEDYYIVKNSWGPSWGLNGYIHMARN----KDNNCGISTMASY 334          
BLAST of CB293760 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.920e-21
Identity = 56/107 (52.34%), Postives = 68/107 (63.55%), Query Frame = -1
Query:  533 YEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIF-TGRCGTS-LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 844
            + D+P   E+AL KAVA+  PVSVAI+ G  +FQ Y+SGI+    C +  LDHGV  VGYG E G  YWIVKNSWG  WG+ GYI M ++        CGIA  ASY
Sbjct:  113 FVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSEDLDHGVLVVGYGFEGGKKYWIVKNSWGEKWGDKGYIYMAKD----RKNHCGIATAASY 215          
BLAST of CB293760 vs. ExPASy Swiss-Prot
Match: BROM2_ANACO (Stem bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.920e-21
Identity = 52/107 (48.60%), Postives = 71/107 (66.36%), Query Frame = -1
Query:  533 IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 853
            I  Y  VP N+E ++  AV+ QP++VA++     FQ Y+SG+F G CGTSL+H VTA+GY    G D  I    WG+ WGEAGYIRM R+V+ + +G CGIA++  Y
Sbjct:  107 ITGYARVPRNNESSMMYAVSKQPITVAVDANAN-FQYYKSGVFNGPCGTSLNHAVTAIGY----GQDSIIYPKKWGAKWGEAGYIRMARDVSSS-SGICGIAIDPLY 207          
BLAST of CB293760 vs. ExPASy Swiss-Prot
Match: MEX2_JACME (Chymomexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.508e-21
Identity = 52/101 (51.49%), Postives = 64/101 (63.37%), Query Frame = -1
Query:  551 IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 853
            I  Y+ VP NDE +L + + NQPVSV  E  G AFQLY+ GIF G CG   DH VTA+GYG     D    KNSWG +WGE GYI+++R  +G   G CG+
Sbjct:  108 ITGYKRVPANDEISLIQGIGNQPVSVLHESKGRAFQLYKGGIFNGPCGYKNDHAVTAIGYGKAQLLD----KNSWGPNWGEKGYIKIKR-ASGKSEGTCGV 203          
BLAST of CB293760 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.278e-21
Identity = 53/106 (50.00%), Postives = 69/106 (65.09%), Query Frame = -1
Query:  533 YEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIF-TGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 844
            Y ++P   E AL++AVAN+ PVSVAI+    +F LY SG++    C  +++HGV  VGYG  NG DYW+VKNSWG ++G+ GYIRM RN        CGIA   SY
Sbjct:  227 YTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQNVNHGVLVVGYGNLNGKDYWLVKNSWGLNFGDQGYIRMARNSG----NHCGIASYPSY 328          
BLAST of CB293760 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.297e-21
Identity = 51/106 (48.11%), Postives = 64/106 (60.38%), Query Frame = -1
Query:  533 DDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 850
            D    V   +E AL  ++ANQPVSV +E  G  FQLY  GIF G CG  +DH V AVGY    G +Y ++KNSWG+ WGE GYIR++R   G   G CG+   + Y
Sbjct:  241 DGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVDHAVAAVGY----GPNYILIKNSWGTGWGENGYIRIKRG-TGNSYGVCGLYTSSFY 341          
The following BLAST results are available for this feature:
BLAST of CB293760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
MEX1_JACME3.499e-2352.48Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CYSP3_HOMAM4.570e-2357.58Digestive cysteine proteinase 3 OS=Homarus america... [more]
CATL_SARPE1.737e-2251.85Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CPR2_ARATH1.126e-2147.71Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CYSP3_DICDI1.920e-2150.46Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CATL1_CHICK1.920e-2152.34Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]
BROM2_ANACO1.920e-2148.60Stem bromelain OS=Ananas comosus PE=1 SV=1[more]
MEX2_JACME2.508e-2151.49Chymomexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CATS_CANFA4.278e-2150.00Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
PAPA1_CARPA7.297e-2148.11Papain OS=Carica papaya PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ce11_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ce11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293760 ID=CB293760; Name=CB293760; organism=Citrus sinensis; type=EST; length=853bp
TTTTTTTTTTTTTTTACCCACCAACGTGCGAATAAATATTTAACAGACCA
TCCACCTGCCGGTACATTAACGTTTGGAATGAAATGCATTAGAATGAACT
AAGGCCGGGGAGAAACTCATTCACAAGCACAAATATTTTCATCCTCCCTT
CGGCCTTCCACTGCTCTTACGGTGCCAACTATAATTAAACACTGCTACTT
CCACCTTGATTTCCATGAGCCCAGGAAGGTTTAGCAGGGGAGCGTCCTAA
TGCCCTCACTCCCAATGGGTTGTCCTTGCTCATCAAGCAGGTCCCAGCAC
GAACATTACAGATGGGATAGTCATGTGGGCAGCACCTATAGTGGTCATCA
CAGCAGGTGGCAGCCTCAAGCGGGCAGCATCCCCATGCAAAGCAAGAGTT
ACCATACTCAAAGACACAGCAGCAAGTGTTGCTCTCAGGGCAAGAGTAAT
AATTGTCACACACACCAGGAGGCTTTGTTGGAGATGGAGGGGACGGTCCA
GGGTTGGGAGGATTTTGGCCTTTCTTTATGGGATATGAGGCCTCCATGGC
AATTCCACACTTGCCCGTGAGAGTGCCAGCCACGTTACGCTCCATCCTAA
TATAGCCAGCCTCTCCCCAGCTACTGCCCCATGAATTCTTCACAATCCAG
TAATCAGCTCCATTTTCTGTGCCATATCCAACAGCAGTAACACCATGGTC
CAGAGATGTCCCACATCTTCCCGTAAATATACCCGATTCATATAACTGGA
ATGCCATGCCACCTCCTTCAATGGCAACACTCACGGGTTGATTTGCAACT
GCCTTTTGCAAAGCTTTCTCGTCATTTAGGGGAACATCTTCATAGTCATC
AAT
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