CB293760

Overview
NameCB293760
Unique NameCB293760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig328 contig Csv1_Contig328:323..1174. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293760 vs. ExPASy Swiss-Prot
Match: CYSP_THEAN (Cysteine proteinase OS=Theileria annulata GN=TACP PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.878e-14
Identity = 41/95 (43.16%), Postives = 52/95 (54.74%), Query Frame = -1
Query:  551 LNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGT--ENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 829
            L     + K++   P  V I       +LY  GIFTG+CG  L+H V  VG G   E G  YWI+KNSWG  WGE G++R++R   G    KCGI
Sbjct:  338 LKGNDVVNKSLVISPTVVGI-AVTKELKLYSGGIFTGKCGGELNHAVLLVGEGVDHETGMRYWIIKNSWGEDWGENGFLRLQRTKKG--LDKCGI 429          
BLAST of CB293760 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.065e-14
Identity = 45/112 (40.18%), Postives = 63/112 (56.25%), Query Frame = -1
Query:  533 IDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGIFTGR-CGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 853
            + D  ++ L  E  L+ AV   +PVSVA E     F+ Y+ G+FT   CG +   ++H V AVGYG E+   YW++KNSWG  WG+ GY +ME          CG+A  +SY
Sbjct:  249 VRDSVNITLGAEDELKHAVGLVRPVSVAFEVVH-EFRFYKKGVFTSNTCGNTPMDVNHAVLAVGYGVEDDVPYWLIKNSWGGEWGDNGYFKMEMG-----KNMCGVATCSSY 354          
BLAST of CB293760 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 5.065e-14
Identity = 40/100 (40.00%), Postives = 61/100 (61.00%), Query Frame = -1
Query:  533 EKALQKAVA-NQPVSVAIEGGGMAFQLYESGIFTG--RCGTSL-DHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 820
            E  LQ  +A N PV+V ++    +FQLY+ G      +C + + +H VTAVGYG+ +   YWI++NSWG+SWG+AGY  + R+        CGI  +++Y
Sbjct:  206 ETGLQTIIAENGPVAVGMDASRPSFQLYKKGTIYSDTKCRSRMMNHCVTAVGYGSNSNGKYWIIRNSWGTSWGDAGYFLLARD----SNNMCGIGRDSNY 301          
BLAST of CB293760 vs. ExPASy Swiss-Prot
Match: CYSP_THEPA (Cysteine proteinase OS=Theileria parva GN=TP03_0285 PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.615e-14
Identity = 38/92 (41.30%), Postives = 57/92 (61.96%), Query Frame = -1
Query:  551 EKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGAD--YWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 820
            ++ + +++ + P SV +       + Y+SG+FTG CG SL+H V  VG G +      YW+V+NSWG+ WGE GY+R+ER   G  T KCG+
Sbjct:  342 KEVMTRSLTSSPCSVYLSVSPELAK-YKSGVFTGECGKSLNHAVVLVGEGYDEVTKKRYWVVQNSWGTDWGENGYMRLERTNMG--TDKCGV 430          
BLAST of CB293760 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.639e-14
Identity = 35/89 (39.33%), Postives = 51/89 (57.30%), Query Frame = -1
Query:  587 IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMER 853
            I D+ D+P +++        N P+++A++    +F  Y  GI T      LDHGV  VGY   +   YWI+KNSW + WGE GYIR+E+
Sbjct:  237 ITDHVDLPQDEDAIAAYLAENGPLAIAVDAE--SFMDYNGGILTSCTSKQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGEDGYIRIEK 323          
BLAST of CB293760 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.128e-13
Identity = 45/114 (39.47%), Postives = 67/114 (58.77%), Query Frame = -1
Query:  533 IDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIF-TGRCG-TSLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 853
            + D+  +P   E+AL KAVA   P+SVA++    +FQ Y SGI+   +C    L+H V  VGYG E    +G  +W+VKNSWG  WG  GY+++ ++     +  CGIA  ++Y
Sbjct:  222 VRDFVQIP-GSEEALMKAVAKVGPISVAVDASHGSFQFYGSGIYYEPQCKRVHLNHAVLVVGYGFEGEESDGNSFWLVKNSWGEEWGMKGYMKLAKD----WSNHCGIATYSTY 330          
BLAST of CB293760 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.474e-13
Identity = 51/146 (34.93%), Postives = 65/146 (44.52%), Query Frame = -1
Query:  533 IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGI-FTGRCG-TSLDHGVTAVGYGTENGAD-------------------------------------YWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 853
            I  Y ++    E +L+    + PVSVAI+    +FQLY SGI +  +C  T LDHGV  VGYG +   D                                     YWIVKNSWG+SWG  GYI M ++        CGIA  +SY
Sbjct:  232 IKGYVNITAGSEISLENGAQHGPVSVAIDASHNSFQLYTSGIYYEPKCSPTELDHGVLVVGYGVQGKDDEGPVLNRKQTIVIHKNEDNKVESSDDSSDSVRPKANNYWIVKNSWGTSWGIKGYILMSKD----RKNNCGIASVSSY 373          
BLAST of CB293760 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.514e-13
Identity = 34/82 (41.46%), Postives = 49/82 (59.76%), Query Frame = -1
Query:  581 NDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNV 826
            N+E   ++ +   P+++AI+   ++   Y  GI        L+H V  VGYGTE G  YW +KNSWGS WGE GY R++RN+
Sbjct:  242 NEENLKKELITMGPIAMAIDAASIS--TYSKGIIHFCENLGLNHAVLLVGYGTEGGVSYWTLKNSWGSDWGEDGYFRVKRNI 321          
BLAST of CB293760 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.288e-13
Identity = 41/95 (43.16%), Postives = 52/95 (54.74%), Query Frame = -1
Query:  542 NDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 826
            ++ K L+    N P++VAI+   +    Y SGI T      L+H V  VGYG EN   YWI KNSWGS+WGE GY R  RN+       CG+  E
Sbjct:  242 DERKLLELLYKNGPIAVAIDCVDIID--YRSGIATVCNDNGLNHAVLLVGYGIENDTPYWIFKNSWGSNWGENGYFRARRNI-----NACGMLNE 329          
BLAST of CB293760 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.600e-13
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = -1
Query:  569 NDEKALQKAVA-NQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTL 826
            + EKA+   +A N P+++A++    +F  Y+SG+ T   G  L+HGV  VGY       YW++KNSWG  WGE GY+R+   V   L
Sbjct:  246 SSEKAMAAWLAKNGPIAIALDAS--SFMSYKSGVLTACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNACL 330          
The following BLAST results are available for this feature:
BLAST of CB293760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
CYSP_THEAN3.878e-1443.16Cysteine proteinase OS=Theileria annulata GN=TACP ... [more]
ALEUL_ARATH5.065e-1440.18Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
ACP1_ENTHI5.065e-1440.00Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
CYSP_THEPA6.615e-1441.30Cysteine proteinase OS=Theileria parva GN=TP03_028... [more]
CYSP_TRYBB8.639e-1439.33Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
TEST2_RAT1.128e-1339.47Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
CYSP2_DICDI1.474e-1334.93Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]
CATV_NPVAH2.514e-1341.46Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
CATV_NPVST4.288e-1343.16Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
LMCPB_LEIME5.600e-1340.23Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ce11_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ce11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293760 ID=CB293760; Name=CB293760; organism=Citrus sinensis; type=EST; length=853bp
TTTTTTTTTTTTTTTACCCACCAACGTGCGAATAAATATTTAACAGACCA
TCCACCTGCCGGTACATTAACGTTTGGAATGAAATGCATTAGAATGAACT
AAGGCCGGGGAGAAACTCATTCACAAGCACAAATATTTTCATCCTCCCTT
CGGCCTTCCACTGCTCTTACGGTGCCAACTATAATTAAACACTGCTACTT
CCACCTTGATTTCCATGAGCCCAGGAAGGTTTAGCAGGGGAGCGTCCTAA
TGCCCTCACTCCCAATGGGTTGTCCTTGCTCATCAAGCAGGTCCCAGCAC
GAACATTACAGATGGGATAGTCATGTGGGCAGCACCTATAGTGGTCATCA
CAGCAGGTGGCAGCCTCAAGCGGGCAGCATCCCCATGCAAAGCAAGAGTT
ACCATACTCAAAGACACAGCAGCAAGTGTTGCTCTCAGGGCAAGAGTAAT
AATTGTCACACACACCAGGAGGCTTTGTTGGAGATGGAGGGGACGGTCCA
GGGTTGGGAGGATTTTGGCCTTTCTTTATGGGATATGAGGCCTCCATGGC
AATTCCACACTTGCCCGTGAGAGTGCCAGCCACGTTACGCTCCATCCTAA
TATAGCCAGCCTCTCCCCAGCTACTGCCCCATGAATTCTTCACAATCCAG
TAATCAGCTCCATTTTCTGTGCCATATCCAACAGCAGTAACACCATGGTC
CAGAGATGTCCCACATCTTCCCGTAAATATACCCGATTCATATAACTGGA
ATGCCATGCCACCTCCTTCAATGGCAACACTCACGGGTTGATTTGCAACT
GCCTTTTGCAAAGCTTTCTCGTCATTTAGGGGAACATCTTCATAGTCATC
AAT
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