CB293761

Overview
NameCB293761
Unique NameCB293761
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 9.774e-41
Identity = 88/205 (42.93%), Postives = 123/205 (60.00%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIID--NGGIDTEEDYPYKAIDG---SCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVA-NQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTL 607
            VDWR+KGAV  VKDQG+CGSCWAFS +  +EG   +    L+SLSEQ+LV CD   N+GC+GGLM  AF++++   NG + TE+ YPY + +G    C    +   V    D   +  + EKA+   +A N P+++A++    +F  Y+SG+ T   G  L+HGV  VGY       YW++KNSWG  WGE GY+R+   V   L
Sbjct:  130 VDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCD-DMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECSNSSEELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDAS--SFMSYKSGVLTACIGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNACL 331          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.667e-40
Identity = 93/207 (44.93%), Postives = 119/207 (57.49%), Query Frame = 2
Query:   14 DWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGRCGTS--LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 625
            DWR + +V  VK Q  CGSCWAFS +A +E +  I     + LSEQ+LVDCD   N GCNGGLM +AFE II  GGI  E  YPY  +DG C   +   + V +       L  EK L++ +  + PVSVAI+   +    Y+SG+    C     L+HGV  VGYG EN   YW +KNSWGS WGE G+ R++R+V       CGI
Sbjct:  138 DWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCD-KVNNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVDGVC---KNTTRYVQLSGCYAYDLRSEKKLRQVLHEKGPVSVAIDVVDLTN--YKSGV-AKHCSVDHGLNHGVLLVGYGQENDVKYWTLKNSWGSDWGEQGFFRIKRDV-----NSCGI 332          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.667e-40
Identity = 96/213 (45.07%), Postives = 123/213 (57.75%), Query Frame = 2
Query:   14 DWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGI---FTGRCGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEAS 640
            DWRKKGAV EVK+QG CGSCWAFS    VEG   +  G+L+SLSEQEL+DCD   ++ C GGL   A+  I + GG++TE+DY Y+    +C+   + AKV  I+D  ++  N+ K         P+SVAI   GM  Q Y  GI   F   C    +DH V  VGYG  +   YW +KNSWGS WGE GY  + R      +G CG+   AS
Sbjct:  254 DWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCD-KVDKACLGGLPSNAYAAIKNLGGLETEDDYGYQGHVQTCNFSAQMAKVY-INDSVELSRNENKIAAWLAQKGPISVAINAFGM--QFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGSDWGEEGYYYLYRG-----SGACGVNTMAS 457          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.844e-40
Identity = 95/219 (43.38%), Postives = 127/219 (57.99%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDC-DTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRC-GTSLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 643
            VDWR  G V  VK+QG C S WAFS   ++EG     TG L+ LSEQ L+DC  ++    C+GG M  AF+++ DNGG+ TEE YPY      C  + +N+    + D+  +P   E+AL KAVA   P+SVA++    +FQ Y+SGI +  +C    L+H V  VGYG E    +G  YW+VKNSWG  WG  GYI+    +A      CGIA  A+Y
Sbjct:  118 VDWRMLGYVTPVKNQGYCASSWAFSATGSLEGQMFKKTGRLVPLSEQNLLDCMGSNVTHDCSGGFMQNAFQYVKDNGGLATEESYPYIGPGRKCRYHAENS-AANVRDFVQIP-GREEALMKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCKRVHLNHAVLVVGYGFEGEESDGNSYWLVKNSWGEEWGMKGYIK----IAKDWNNHCGIATLATY 330          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.714e-40
Identity = 84/195 (43.08%), Postives = 117/195 (60.00%), Query Frame = 2
Query:   14 DWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVT-IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNV 595
            DWR++  V  +K+QG+CG+CWAF+T+A+VE    +    LI LSEQ+L+DCD S + GCNGGL+  AFE I+  GG+ TE DYP+   +  C   R    VV+ +  Y  V +N+EK      A  P+ +AI+   +    Y  G+ +      L+H V  VGYG ENG  YW+ KN+WG  WGE GY R+ +NV
Sbjct:  149 DWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCD-SVDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVGRNRRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIPMAIDAADIV--NYYRGVISSCENNGLNHAVLLVGYGVENGVPYWVFKNTWGDDWGENGYFRVRQNV 340          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.851e-40
Identity = 94/213 (44.13%), Postives = 122/213 (57.28%), Query Frame = 2
Query:   14 DWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGI---FTGRCGTSL-DHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEAS 640
            DWR KGAV +VKDQG CGSCWAFS    VEG   +  G+L+SLSEQEL+DCD   ++ C GGL   A+  I + GG++TE+DY Y+    SC+   + AKV  I+D  ++  N++K         P+SVAI   GM  Q Y  GI       C   L DH V  VGYG  +   +W +KNSWG+ WGE GY  + R      +G CG+   AS
Sbjct:  276 DWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCD-KMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAKVY-INDSVELSQNEQKLAAWLAKRGPISVAINAFGM--QFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRG-----SGACGVNTMAS 479          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.335e-40
Identity = 93/211 (44.08%), Postives = 124/211 (58.77%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEG---INKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVT-IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRM--ERNVAGTLT 610
            VDWRKKG V  ++DQG+CGSC+ F +IAA+EG   I K      + LSE+ +V C     N GCNGGL    + +I++NG I  E DYPY   D +C   R + K    I  Y  V  N+E  L+ A++   V V+I+   + FQLY+SG +T  +C  +   L+H V AVGYG  +G + WIV+NSWG+ WGE GYI M  E N  G  T
Sbjct:   98 VDWRKKGKVTPIRDQGNCGSCYTFGSIAALEGRLLIEKGGDSETLDLSEEHMVQCTREDGNNGCNGGLGSNVYNYIMENG-IAKESDYPYTGSDSTC---RSDVKAFAKIKSYNRVARNNEVELKAAISQGLVDVSIDASSVQFQLYKSGAYTDTQCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGEKGYINMVIEGNTCGVAT 304          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.081e-39
Identity = 89/210 (42.38%), Postives = 125/210 (59.52%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEG---INKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRM--ERNVAGTLT 610
            VDWRK+G V  ++DQ  CGSC+ F ++AA+EG   I K    + + LSE+ +V C     N GCNGGL    +++II++G +  E DYPY   D +C T  K+   +T   Y  VP N+E  L+ A++   V V+I+     FQLY+SG +T  +C  +   L+H V AVGYG  +G + WIV+NSWG+ WG+ GYI M  E N  G  T
Sbjct:   98 VDWRKEGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGDANTLDLSEEHMVQCTRDNGNNGCNGGLGSNVYDYIIEHG-VAKESDYPYTGSDSTCKTNVKSFAKIT--GYTKVPRNNEAELKAALSQGLVDVSIDASSAKFQLYKSGAYTDTKCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGDKGYINMVIEGNTCGVAT 304          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: LMCPA_LEIME (Cysteine proteinase A OS=Leishmania mexicana GN=LMCPA PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.411e-39
Identity = 90/196 (45.92%), Postives = 117/196 (59.69%), Query Frame = 2
Query:    5 VGVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIID--NGGIDTEEDYPYKAIDGSCDTYRKNAKV-VTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRM 583
            + VDWR KGAV  VK+QG CGSCWAFS I  +EG       SL+SLSEQ LV CD + +EGCNGGLMD A  +I+   NG + TE  YPY +  G+        +V   I  +  +P ++E+  +      PV+VA++     +QLY  G+ +     SL+HGV  VG+       YWIVKNSWGSSWGE GYIR+
Sbjct:  131 MSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCD-NIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPCHDEGEVGAKITGFLSLPHDEERIAEWVEKRGPVAVAVD--ATTWQLYFGGVVSLCLAWSLNHGVLIVGFNKNAKPPYWIVKNSWGSSWGEKGYIRL 323          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CYSP7_DICDI (Cysteine proteinase 7 OS=Dictyostelium discoideum GN=cprG PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.411e-39
Identity = 85/175 (48.57%), Postives = 104/175 (59.43%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG--SLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFT--GRCGTSLDHGVTAVGYGTENGA 520
            VDWR +GAV  +K+QG CG CW+FST  A EG   +  G  +L+SLSEQ L+DC  SY N GC GGLM  AFE+II+N GIDTE  YPY A DG    +        +  Y +V    E  L   V   P SVAI+    +FQLY SGI+       T LDHGV AVG+GT +G+
Sbjct:  114 VDWRTQGAVTPIKNQGQCGGCWSFSTTGATEGAQYLANGKKNLVSLSEQNLIDCSGSYGNNGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDGKKCKFNPKNVAAQLSSYVNVTSGSESDLAAKVTQGPTSVAIDASNQSFQLYVSGIYNEPACSSTQLDHGVLAVGFGTGSGS 288          
The following BLAST results are available for this feature:
BLAST of CB293761 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 181
Match NameE-valueIdentityDescription
CYSP2_LEIPI9.774e-4142.93Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]
CATV_GVXN1.667e-4044.93Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CATF_MOUSE1.667e-4045.07Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
TEST2_MOUSE2.844e-4043.38Testin-2 OS=Mus musculus PE=2 SV=1[more]
CATV_NPVLD3.714e-4043.08Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATF_HUMAN4.851e-4044.13Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CPP1_ENTHI6.335e-4044.08Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]
CPP2_ENTHI1.081e-3942.38Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]
LMCPA_LEIME1.411e-3945.92Cysteine proteinase A OS=Leishmania mexicana GN=LM... [more]
CYSP7_DICDI1.411e-3948.57Cysteine proteinase 7 OS=Dictyostelium discoideum ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_06ce11_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ce11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293761 ID=CB293761; Name=CB293761; organism=Citrus sinensis; type=EST; length=800bp
GCACGTAGGTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAG
ATCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCATTGCAGCTGTA
GAGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCACTATCCGAGCA
GGAGTTGGTGGATTGTGATACATCATATAATGAAGGATGTAATGGTGGTT
TGATGGACTATGCATTCGAGTTCATTATTGATAATGGAGGTATTGACACA
GAAGAAGATTACCCCTACAAAGCCATTGATGGTAGCTGTGACACATATCG
GAAAAATGCCAAAGTAGTTACAATTGATGACTATGAAGATGTTCCCCTAA
ATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAATCAACCCGTGAGTGTT
GCCATTGAAGGAGGTGGCATGGCATTCCAGTTATATGAATCGGGTATATT
TACGGGAAGATGTGGGACATCTCTGGACCATGGTGTTACTGCTGTTGGAT
ATGGCACAGAAAATGGAGCTGATTACTGGATTGTGAAGAATTCATGGGGC
AGTAGCTGGGGAGAGGCTGGCTATATTAGGATGGAGCGTAACGTGGCTGG
CACTCTCACGGGCAAGTGTGGAATTGCCATGGAGGCCTCATATCCCATAA
AGAAAGGCCAAAATCCTCCCAACCCTGGACCGTCCCCTCCATCTCCAACA
AAGCCTCCTGCTGTGTGTGACAATTATTACTCTTGCCCTGAGAGCAACAC
TTGCTGCTGTGTCTTTGAGTATGGTAACTCTTGCTTTGCATGGGGATGCT
back to top