CB293761

Overview
NameCB293761
Unique NameCB293761
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.020e-37
Identity = 81/207 (39.13%), Postives = 112/207 (54.11%), Query Frame = 2
Query:   14 DWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 634
            DWR+   V  VK+QG CG+CWAF+T+ ++E    I    LI+LSEQ+ +DCD   N GC+GGL+  AFE  ++ GG+  E DYPY+  +G C        V        + + +EK      A  P+ VAI+   +    Y  GI        L+H V  VGY  EN   YWI+KN+WG+ WGE GY R+++N+       CGI  E
Sbjct:  118 DWRQFNKVTSVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDR-VNAGCDGGLLHTAFESAMEMGGVQMESDYPYETANGQCRINPNRFVVGVRSCRRYIVMFEEKLKDLLRAVGPIPVAIDASDIVN--YRRGIMRQCANHGLNHAVLLVGYAVENNIPYWILKNTWGTDWGEDGYFRVQQNI-----NACGIRNE 316          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CYSP6_DICDI (Cysteine proteinase 6 OS=Dictyostelium discoideum GN=cprF PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.907e-36
Identity = 86/195 (44.10%), Postives = 106/195 (54.36%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG--SLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFT--GRCGTSLDHGVTAVGYGTEN--------GADYWIVKNSWGSS 556
            VDWR KGAV  +K+QG CG CW+FS   A EG   I  G   L S+SEQ+L+DC  SY N GC GGLM  AFE+II+NGGIDTE  YP+ A    C  Y  +     +  Y +V    E  L   V   P SVAI+    +FQ Y SGI+       T LDHGV AVG+G+ +        G+      N+W  S
Sbjct:  116 VDWRAKGAVTPIKNQGECGGCWSFSATGATEGAQYIANGDSDLTSVSEQQLIDCSGSYGNNGCEGGLMTLAFEYIINNGGIDTESSYPFTANTEKC-KYNPSNIGAELSSYVNVTSGSESDLAAKVTQGPTSVAIDASQPSFQFYSSGIYNEPACSSTQLDHGVLAVGFGSGSSGSQSQSAGSQSQSSNNNWSES 309          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.254e-36
Identity = 82/218 (37.61%), Postives = 120/218 (55.05%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIF-TGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 643
            VDWRKKG V  V+ QG C +CWAF+   A+E      TG L  LS Q LVDC     N GC GG    AF++++ NGG+++E  YPY+  DG C    KN+K   I  +  +P +++  +       P++  I+    +F+ Y+ GI+    C + ++ HGV  VGYG +    +G  YW++KNSWG  WG  GY+++ ++        CGIA  A Y
Sbjct:  119 VDWRKKGYVTPVRRQGDCDACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDCSKPQGNNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKDGPCRYNPKNSK-AEITGFVSLPQSEDILMAAVATIGPITAGIDASHESFKNYKGGIYHEPNCSSDTVTHGVLVVGYGFKGIETDGNHYWLIKNSWGKRWGIRGYMKLAKD----KNNHCGIASYAHY 331          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CYSP_THEAN (Cysteine proteinase OS=Theileria annulata GN=TACP PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 4.249e-36
Identity = 90/208 (43.27%), Postives = 118/208 (56.73%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGS-CGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGT--ENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 625
            ++W +  AV+ +KDQG  CGSCWAFS+IA+VE + ++       LSEQELV+CD S + GC GGL   A E+ I + G+  E + PY  I   C    KN   V ID    +  ND   + K++   P  V I       +LY  GIFTG+CG  L+H V  VG G   E G  YWI+KNSWG  WGE G++R++R   G    KCGI
Sbjct:  231 LNWARTDAVSPIKDQGDHCGSCWAFSSIASVESLYRLYKNKSYFLSEQELVNCDKS-SMGCAGGLPITALEY-IHSKGVSFESEVPYTGIVSPCKPSIKNK--VFIDSISILKGND--VVNKSLVISPTVVGI-AVTKELKLYSGGIFTGKCGGELNHAVLLVGEGVDHETGMRYWIIKNSWGEDWGENGFLRLQRTKKG--LDKCGI 429          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CYSP_THEPA (Cysteine proteinase OS=Theileria parva GN=TP03_0285 PE=3 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 5.550e-36
Identity = 81/207 (39.13%), Postives = 121/207 (58.45%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGAD--YWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 625
            +DWR+  +V  VKDQ +CG CWAFST+ +VEG           LS QEL+DCD S++ GC GGL++ A+E+ +   G+ + +D P+  +D +       AK V++  Y       ++ + +++ + P SV +         Y+SG+FTG CG SL+H V  VG G +      YW+V+NSWG+ WGE GY+R+ER   G  T KCG+
Sbjct:  233 LDWRRSSSVTSVKDQSNCGGCWAFSTVGSVEGYYMSHFDKSYELSVQELLDCD-SFSNGCQGGLLESAYEY-VRKYGLVSAKDLPF--VDKARRCSVPKAKKVSVPSYH--VFKGKEVMTRSLTSSPCSVYL-SVSPELAKYKSGVFTGECGKSLNHAVVLVGEGYDEVTKKRYWVVQNSWGTDWGENGYMRLERTNMG--TDKCGV 430          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CATV_NPVMC (Viral cathepsin OS=Mamestra configurata nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.248e-36
Identity = 82/207 (39.61%), Postives = 114/207 (55.07%), Query Frame = 2
Query:   14 DWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 634
            DWR    V  VKDQG CG+CWAF+ + A+E    I    LI L+EQ+LVDCD   + GC+GGL+  A+E I+  GG++ E DYPYKA+   C        V   + Y  V L++E+         P+++A++   +    Y  G+ +      L+H V  VGYG EN   YW +KNSWGS +GE GY+R+ R V       CG+  E
Sbjct:  131 DWRNYNKVTSVKDQGMCGACWAFAGLGALESQYAIKYDRLIDLAEQQLVDCD-FVDMGCDGGLIHTAYEQIMHIGGVEQEYDYPYKAVRLPCAVKPHKFAVGVRNCYRYVLLSEERLEDLLRHVGPIAIAVDAVDLTD--YYGGVISFCENNGLNHAVLLVGYGIENNVPYWTIKNSWGSDYGENGYVRIRRGV-----NSCGMINE 329          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CATM_MOUSE (Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.248e-36
Identity = 84/218 (38.53%), Postives = 118/218 (54.13%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGI-FTGRCGTS-LDHGVTAVGYG----TENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 643
            ++W+K+G V  V+ QG C SCWAFS   A+EG     TG LI LS Q LVDC     N GC  G    A  ++++NGG+++E  YPY+  DGSC  Y        I  +E VP N++  +    +  P+SVAI+    +F  Y+ GI +   C +  + H +  VGYG      +G  YW+VKNS G+ WG  GY+++ R+        CGIA  A Y
Sbjct:  118 INWKKRGYVTPVQTQGRCNSCWAFSVTGAIEGQMFRKTGQLIPLSVQNLVDCSRPQGNWGCYLGNTYLALHYVMENGGLESEATYPYEEKDGSC-RYSPENSTANITGFEFVPKNEDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCSSCVVTHSMLLVGYGFTGRESDGRKYWLVKNSMGTQWGNKGYMKISRDKG----NHCGIATYALY 330          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CATV_NPVSE (Viral cathepsin OS=Spodoptera exigua nuclear polyhedrosis virus (strain US) GN=VCATH PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.236e-35
Identity = 83/210 (39.52%), Postives = 113/210 (53.81%), Query Frame = 2
Query:    5 VGVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 634
            V  DWR    +  VKDQG CG+CW F+++ A+E    I    LI LSEQ+LVDCD   + GC+GGL+  A+E I+  GG++ E DY YKA    C            + Y  V LN+E+         P+++A++   +    Y  GI +      L+H V  VGYG EN   YWI+KNSWGS +GE GY+R+ R V       CG+  E
Sbjct:  128 VSFDWRSMNKITSVKDQGMCGACWRFASLGALESQYAIKYDRLIDLSEQQLVDCDF-VDMGCDGGLIHTAYEQIMKMGGVEQEFDYSYKAERQPCALKPHKFATGVRNCYRYVILNEERLEDLLRYVGPIAIAVDAVDLTD--YYGGIVSFCENNGLNHAVLLVGYGVENNVPYWIIKNSWGSDYGEDGYVRVRRGV-----NSCGMINE 329          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.698e-35
Identity = 77/217 (35.48%), Postives = 115/217 (53.00%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIF-TGRCGTSLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 643
            VDWR +G V  V+ QG C SCWAF    A+EG     TG LI LS Q L+DC     N GC  G    AF++++ NGG++ E  YPY+  +G C    KN+    I  +  +P +++  +       P++  +     +F+ Y+ G++   +C + ++H V  VGYG E    +G +YW++KNSWG  WG  GY++    +A      C IA  A Y
Sbjct:  129 VDWRNEGYVTRVRKQGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDCSKPQGNRGCLWGNTYNAFQYVLHNGGLEAEATYPYERKEGVCRYNPKNSS-AKITGFVVLPESEDVLMDAVATKGPIATGVHVISSSFRFYQKGVYHEPKCSSYVNHAVLVVGYGFEGNETDGNNYWLIKNSWGKRWGLRGYMK----IAKDRNNHCAIASLAQY 340          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CATV_NPVBS (Viral cathepsin OS=Buzura suppressaria nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.367e-34
Identity = 78/208 (37.50%), Postives = 112/208 (53.85%), Query Frame = 2
Query:   14 DWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDD-YEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 634
            DWR++  V  +K+Q +CG+CWAF+T+A++E    I     I LSEQ+++DCD   + GC+GGL+  AFE +I  G +  E +YPY  ++  C+       VV +   Y  V   +EK      A  P+ +AI+  G+    Y  GI        L+H V  VGYG EN   +W  KN+WG  WGE GY R+ +NV       CG+  E
Sbjct:  121 DWRQQNKVTSIKNQKACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDCD-YVDMGCDGGLLHTAFEQMIQMGELVQEHEYPYAGVNKPCELRGDETGVVKVKGCYRYVVFREEKLKDLLRAVGPIPMAIDASGIV--NYHHGIIHYCENYGLNHAVLLVGYGVENNVPFWTFKNTWGKDWGEEGYFRVRQNV-----DACGMTNE 320          
The following BLAST results are available for this feature:
BLAST of CB293761 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 181
Match NameE-valueIdentityDescription
CATV_NPVOP5.020e-3739.13Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
CYSP6_DICDI1.907e-3644.10Cysteine proteinase 6 OS=Dictyostelium discoideum ... [more]
CATR_MOUSE3.254e-3637.61Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CYSP_THEAN4.249e-3643.27Cysteine proteinase OS=Theileria annulata GN=TACP ... [more]
CYSP_THEPA5.550e-3639.13Cysteine proteinase OS=Theileria parva GN=TP03_028... [more]
CATV_NPVMC7.248e-3639.61Viral cathepsin OS=Mamestra configurata nucleopoly... [more]
CATM_MOUSE7.248e-3638.53Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1[more]
CATV_NPVSE1.236e-3539.52Viral cathepsin OS=Spodoptera exigua nuclear polyh... [more]
CATQ_RAT4.698e-3535.48Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CATV_NPVBS1.367e-3437.50Viral cathepsin OS=Buzura suppressaria nuclear pol... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ce11_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ce11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293761 ID=CB293761; Name=CB293761; organism=Citrus sinensis; type=EST; length=800bp
GCACGTAGGTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAG
ATCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCATTGCAGCTGTA
GAGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCACTATCCGAGCA
GGAGTTGGTGGATTGTGATACATCATATAATGAAGGATGTAATGGTGGTT
TGATGGACTATGCATTCGAGTTCATTATTGATAATGGAGGTATTGACACA
GAAGAAGATTACCCCTACAAAGCCATTGATGGTAGCTGTGACACATATCG
GAAAAATGCCAAAGTAGTTACAATTGATGACTATGAAGATGTTCCCCTAA
ATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAATCAACCCGTGAGTGTT
GCCATTGAAGGAGGTGGCATGGCATTCCAGTTATATGAATCGGGTATATT
TACGGGAAGATGTGGGACATCTCTGGACCATGGTGTTACTGCTGTTGGAT
ATGGCACAGAAAATGGAGCTGATTACTGGATTGTGAAGAATTCATGGGGC
AGTAGCTGGGGAGAGGCTGGCTATATTAGGATGGAGCGTAACGTGGCTGG
CACTCTCACGGGCAAGTGTGGAATTGCCATGGAGGCCTCATATCCCATAA
AGAAAGGCCAAAATCCTCCCAACCCTGGACCGTCCCCTCCATCTCCAACA
AAGCCTCCTGCTGTGTGTGACAATTATTACTCTTGCCCTGAGAGCAACAC
TTGCTGCTGTGTCTTTGAGTATGGTAACTCTTGCTTTGCATGGGGATGCT
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