CB293761

Overview
NameCB293761
Unique NameCB293761
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: MEX2_JACME (Chymomexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 8.799e-58
Identity = 110/205 (53.66%), Postives = 135/205 (65.85%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 625
            +DWR KGAV  VK+Q  CGSCWAFST+A VEGINKI TG LISLSEQEL+DCD   + GC GG    + +++ DNGG+ TE++YPY+   G C    K    V I  Y+ VP NDE +L + + NQPVSV  E  G AFQLY+ GIF G CG   DH VTA+GYG     D    KNSWG +WGE GYI+++R  +G   G CG+
Sbjct:    5 IDWRDKGAVTPVKNQNPCGSCWAFSTVATVEGINKIRTGKLISLSEQELLDCDRR-SHGCKGGYQTGSIQYVADNGGVHTEKEYPYEKKQGKCRAKEKKGTKVQITGYKRVPANDEISLIQGIGNQPVSVLHESKGRAFQLYKGGIFNGPCGYKNDHAVTAIGYGKAQLLD----KNSWGPNWGEKGYIKIKR-ASGKSEGTCGV 203          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 8.799e-58
Identity = 108/205 (52.68%), Postives = 141/205 (68.78%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 625
            +DWR+KGAV  VK+Q  CGSCWAFST+A +EGINKI+TG LISLSEQEL+DC+   + GC+GG    + ++++DNG + TE +YPY+   G C    K    V I  Y+ VP NDE +L +A+ANQPVSV  +  G  FQ Y+ GI+ G CGT+ DH VTAVGY    G  Y ++KNSWG +WGE GYIR++R  +G   G CG+
Sbjct:    5 IDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCEYR-SHGCDGGYQTPSLQYVVDNG-VHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTNTDHAVTAVGY----GKTYLLLKNSWGPNWGEKGYIRIKR-ASGRSKGTCGV 202          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 5.703e-57
Identity = 116/215 (53.95%), Postives = 138/215 (64.19%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 643
            VDWR+KG V  VKDQG CGSCWAFST  A+EG +    G L+SLSEQ LVDC     N+GCNGGLMD AF+++ DNGGID+EE YPY A D     Y+          + D+P   E+AL KAVA+  PVSVAI+ G  +FQ Y+SGI +   C +  LDHGV  VGYG E G  YWIVKNSWG  WG+ GYI M ++        CGIA  ASY
Sbjct:    5 VDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCSRPEGNQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDCRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSEDLDHGVLVVGYGFEGGKKYWIVKNSWGEKWGDKGYIYMAKD----RKNHCGIATAASY 215          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: MDO1_PSEMR (Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 7.449e-57
Identity = 106/208 (50.96%), Postives = 146/208 (70.19%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCD-TYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAM 631
            +DWR  GAV EVK+QG CG CWAF+ IA VEGI KI  G+L+ LSEQE++DC  SY  GC GG ++ A++FII N G+ T+E+YPY+A  G+C+  Y  N+  +T   Y  V  NDE  +  AV+NQP++  I+  G  FQ Y+ G+++G CG SL+H +T +GYG ++   YWIV+NSWGSSWG+ GY+R+ R+V+ +  G CGIAM
Sbjct:    6 IDWRDYGAVNEVKNQGPCGGCWAFAAIATVEGIYKIRKGNLVYLSEQEVLDCAVSY--GCKGGWVNRAYDFIISNNGVTTDENYPYRAYQGTCNANYFPNSAYIT--GYSYVRRNDESHMMYAVSNQPIAALIDASGDNFQYYKGGVYSGPCGFSLNHAITIIGYGRDS---YWIVRNSWGSSWGQGGYVRIRRDVSHS-GGVCGIAM 205          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.271e-56
Identity = 114/215 (53.02%), Postives = 143/215 (66.51%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYN-EGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGTS-LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 643
            VDWR KGAV  VKDQG CGSCWAFST  ++EG + + TGSLISL+EQ+LVDC   Y  +GCNGG M+ AF++I  N GIDTE  YPY+A DGSC  +  N+   T   + ++    E  LQ+AV +  P+SV I+    +FQ Y SG+ +   C  S LDH V AVGYG+E G D+W+VKNSW +SWG+AGYI+M RN        CGIA  ASY
Sbjct:  111 VDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYEARDGSC-RFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRN----RNNNCGIATVASY 320          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 1.271e-56
Identity = 112/215 (52.09%), Postives = 145/215 (67.44%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY--NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGI-FTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 643
            +DWR+KG V EVK QG+CGSCWAFS + A+E   K+ TG L+SLS Q LVDC T+   N+GCNGG M  AF++IIDN GID+E  YPYKA+DG C    KN +  T   Y ++P   E+AL++AVAN+ PVSV I+    +F LY++G+ +   C  +++HGV  VGYG  +G DYW+VKNSWG  +G+ GYIRM RN        CGIA   SY
Sbjct:  119 MDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGKCQYDVKN-RAATCSRYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQNVNHGVLVVGYGNLDGKDYWLVKNSWGLHFGDQGYIRMARNSG----NHCGIANYPSY 328          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.697e-56
Identity = 117/216 (54.17%), Postives = 142/216 (65.74%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE-NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 643
            VDWR KGAV  VKDQG CGSCWAFS +AA+EG + + TG L+SLSEQ LVDC +SY N+GCNGG    A+++II N GIDTE  YPYKAID +C  Y       T+  Y +    DE ALQ AV N+ PVSV I+ G  +F  Y  G+ +   C +   +H VTAVGYGT+ NG DYWIVKNSWG+ WGE+GYI+M RN        C IA  + Y
Sbjct:  110 VDWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCSSSYGNQGCNGGWPYQAYQYIIANRGIDTESSYPYKAIDDNC-RYDAGNIGATVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQSSFGSYGGGVYYEPNCDSWYANHAVTAVGYGTDANGGDYWIVKNSWGAWWGESGYIKMARN----RDNNCAIATYSVY 320          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 8.235e-56
Identity = 111/217 (51.15%), Postives = 146/217 (67.28%), Query Frame = 2
Query:    5 VGVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYK-AIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTS--LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 643
            + VDWR+K AV  VKDQG CGSC++FST  +VEG+  I TG L+SLSEQ ++DC +S+ NEGCNGGLM  AFE+II N G+++EE YPY+  ++  C  +++ +    I  Y+++   DE  LQ A+   PVSVAI+    +FQLY +G++     +S  LDHGV AVG GT+NG DY+IVKNSWG SWG  GYI M RN        CGI+  ASY
Sbjct:  123 LNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDCSSSFGNEGCNGGLMTNAFEYIIKNNGLNSEEQYPYEMKVNDEC-KFQEGSVAAKITSYKEIEAGDENDLQNALLLNPVSVAIDASHNSFQLYTAGVYYEPACSSEDLDHGVLAVGMGTDNGEDYYIVKNSWGPSWGLNGYIHMARN----KDNNCGISTMASY 334          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 8.235e-56
Identity = 110/214 (51.40%), Postives = 138/214 (64.49%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGI-FTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 643
            VDWR+KG V EVK QGSCG+CWAFS + A+E   K+ TG L+SLS Q LVDC   Y N+GCNGG M  AF++IIDN GID+E  YPYKA D  C  Y    +  T   Y ++P   E  L++AVAN+ PV V ++    +F LY SG+ +   C   ++HGV  +GYG  NG +YW+VKNSWGS++GE GYIRM RN        CGIA   SY
Sbjct:  119 VDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEKYGNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATDQKCQ-YDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPACTQKVNHGVLVIGYGDLNGKEYWLVKNSWGSNFGEQGYIRMARNKG----NHCGIASYPSY 327          
BLAST of CB293761 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.396e-55
Identity = 115/215 (53.49%), Postives = 140/215 (65.12%), Query Frame = 2
Query:   11 VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGR-CG-TSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 643
            VDWR K  V  VKDQ  CGSCWAFS   A+EG + +    L+SLSEQ+LVDC T Y N+GC GG M  AF++I DNGGIDTE  YPY+A D SC     +   +     E    + E+ALQ+AV+   P+SVAI+    +FQ Y SG++  + C  T LDHGV AVGYGTE+  DYW+VKNSWGSSWG+AGYI+M RN        CGIA E SY
Sbjct:  110 VDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAEDRSCRFDANSIGAICTGSVE--VQHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYGTESTKDYWLVKNSWGSSWGDAGYIKMSRN----RDNNCGIASEPSY 318          
The following BLAST results are available for this feature:
BLAST of CB293761 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 181
Match NameE-valueIdentityDescription
MEX2_JACME8.799e-5853.66Chymomexicain OS=Jacaratia mexicana PE=1 SV=1[more]
MEX1_JACME8.799e-5852.68Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CATL1_CHICK5.703e-5753.95Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]
MDO1_PSEMR7.449e-5750.96Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=... [more]
CYSP2_HOMAM1.271e-5653.02Digestive cysteine proteinase 2 OS=Homarus america... [more]
CATS_BOVIN1.271e-5652.09Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CRUST_PANBO3.697e-5654.17Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CYSP3_DICDI8.235e-5651.15Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CATS_SAIBB8.235e-5651.40Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
CYSP3_HOMAM2.396e-5553.49Digestive cysteine proteinase 3 OS=Homarus america... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ce11_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ce11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293761 ID=CB293761; Name=CB293761; organism=Citrus sinensis; type=EST; length=800bp
GCACGTAGGTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAG
ATCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCATTGCAGCTGTA
GAGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCACTATCCGAGCA
GGAGTTGGTGGATTGTGATACATCATATAATGAAGGATGTAATGGTGGTT
TGATGGACTATGCATTCGAGTTCATTATTGATAATGGAGGTATTGACACA
GAAGAAGATTACCCCTACAAAGCCATTGATGGTAGCTGTGACACATATCG
GAAAAATGCCAAAGTAGTTACAATTGATGACTATGAAGATGTTCCCCTAA
ATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAATCAACCCGTGAGTGTT
GCCATTGAAGGAGGTGGCATGGCATTCCAGTTATATGAATCGGGTATATT
TACGGGAAGATGTGGGACATCTCTGGACCATGGTGTTACTGCTGTTGGAT
ATGGCACAGAAAATGGAGCTGATTACTGGATTGTGAAGAATTCATGGGGC
AGTAGCTGGGGAGAGGCTGGCTATATTAGGATGGAGCGTAACGTGGCTGG
CACTCTCACGGGCAAGTGTGGAATTGCCATGGAGGCCTCATATCCCATAA
AGAAAGGCCAAAATCCTCCCAACCCTGGACCGTCCCCTCCATCTCCAACA
AAGCCTCCTGCTGTGTGTGACAATTATTACTCTTGCCCTGAGAGCAACAC
TTGCTGCTGTGTCTTTGAGTATGGTAACTCTTGCTTTGCATGGGGATGCT
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