CB293762

Overview
NameCB293762
Unique NameCB293762
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293762 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 1.752e-21
Identity = 62/145 (42.76%), Postives = 86/145 (59.31%), Query Frame = -2
Query:  178 SRAITQYIAQEFPDKGTQLTCPGKPI---APLLVWKEVEALQFAPPSSKLNWELVYKPMFGMTTDPAAVEENEVKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKK--LFDARPHVSAWAADIISSPAWAKV 597
            SRAI +YIA+++  +G  L   GK I     +  W +VEA  + PP   L   +V+ P+ G   D   ++E+E KLA++LDVYEA+LS+++YLA D  +L DL HLP    L+G P+ K  L   R HVSAW   I S  AW +V
Sbjct:   66 SRAIMRYIAEKYRSQGPDLL--GKTIEERGQVEQWLDVEATSYHPPLLALTLNIVFAPLMGFPADEKVIKESEEKLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVG-PIGKAHLIKDRKHVSAWWDKISSRAAWKEV 207          
BLAST of CB293762 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.483e-20
Identity = 57/147 (38.78%), Postives = 85/147 (57.82%), Query Frame = -2
Query:  166 SRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFAPPSSKLNWELVYKP-MFGMTTDPAAVEENEVKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADIISSPAWAKVLPLL 597
            SRAI +YI +++  +   L   G  +  A + VW EVE  Q+    S + +E +  P M G+ T+   V+E+  KL K+L+VYEARLSQS YLA D  +  DL+H P     +GTP   LFD+ PHV AW   +++ P+  K+  ++
Sbjct:   68 SRAIGKYILRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMGTPYASLFDSYPHVKAWWERLMARPSVKKLAAVM 214          
BLAST of CB293762 vs. ExPASy Swiss-Prot
Match: GSTF1_MAIZE (Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE=1 SV=4)

HSP 1 Score: 99.3673 bits (246), Expect = 1.483e-20
Identity = 59/147 (40.14%), Postives = 86/147 (58.50%), Query Frame = -2
Query:  163 SRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFAPPSSKLNWELVYKPMFGMTTDPAAVEENEVKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADIISSPAWAKVLPLLK 597
            SRAI +Y A++      +L   G  +  A + VW EVEA Q+    + + ++++  PM G TTD   V+EN  KL K+L+VYEARL++ KYLA D  +L DL+H+     L  TP   + DA PHV AW + ++  P+  KV  L+K
Sbjct:   68 SRAICKYAARK---NKPELLREGNLEEAAMVDVWIEVEANQYTAALNPILFQVLISPMLGGTTDQKVVDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFATPYASVLDAYPHVKAWWSGLMERPSVQKVAALMK 211          
BLAST of CB293762 vs. ExPASy Swiss-Prot
Match: GSTF7_ARATH (Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.304e-20
Identity = 58/147 (39.46%), Postives = 84/147 (57.14%), Query Frame = -2
Query:  169 SRAITQYIAQEFPDKGTQL---TCPGKPIAPLLVWKEVEALQFAPPSSKLNWELVYKPMFGMTTDPAAVEENEVKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLG-TPVKKLFDARPHVSAWAADIISSPAWAKVLPL 597
            SRAI +Y A ++ D+GT L   T  G+ I     W EVE   F   +  L   +V+KP  G   D A VEE +VK  K+LDVYE RL+ ++YL  D FTL DL H+P +  ++  T +  L  +R +++ W  +I + PAW K++ L
Sbjct:   67 SRAIARYYATKYADQGTDLLGKTLEGRAIVDQ--WVEVENNYFYAVALPLVMNVVFKPKSGKPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLSHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMEL 211          
BLAST of CB293762 vs. ExPASy Swiss-Prot
Match: GSTF2_ORYSJ (Probable glutathione S-transferase GSTF2 OS=Oryza sativa subsp. japonica GN=GSTF2 PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 5.636e-20
Identity = 59/148 (39.86%), Postives = 86/148 (58.11%), Query Frame = -2
Query:  163 SRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFAPPSSKLNWELVYKPM-FGMTTDPAAVEENEVKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADIISSPAWAKVLPLLK 597
            SRAI +Y+ ++      +L   G  K  A + VW EVE+ Q+ P  + + ++ + +PM FG   D   VEEN  KL K+L+VYEARL++ KYLA D  ++ DL H+     L  TP   + DA PHV AW  D+++ P+  KV  L+K
Sbjct:   68 SRAICKYVCRK---NKPELLKDGDLKESAMVDVWLEVESNQYTPALNPILFQCLIRPMMFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGTVCLGATPHASVLDAYPHVKAWWTDLMARPSSQKVASLMK 212          
BLAST of CB293762 vs. ExPASy Swiss-Prot
Match: GSTF4_MAIZE (Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 9.949e-17
Identity = 48/110 (43.64%), Postives = 63/110 (57.27%), Query Frame = -2
Query:  178 VWKEVEALQFAPPSSKLNWELVYKPMFGMTTDPAAVEENEVKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADIISSPAWAKV 507
            VW EVEA Q +PP+  +  E V+ P  G   + A V+EN  KL K+L+VYEARL+   YLA D  +L DL     ++ L+ T    L  A PHVSAW   + + PA  KV
Sbjct:   99 VWLEVEAHQLSPPAIAIVVECVFAPFLGRERNQAVVDENVEKLKKVLEVYEARLATCTYLAGDFLSLADLSPFTIMHCLMATEYAALVHALPHVSAWWQGLAARPAANKV 208          
BLAST of CB293762 vs. ExPASy Swiss-Prot
Match: GSTF1_WHEAT (Glutathione S-transferase 1 OS=Triticum aestivum GN=GSTA1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.937e-16
Identity = 54/148 (36.49%), Postives = 78/148 (52.70%), Query Frame = -2
Query:  178 SRAITQYIAQEFPDK-GTQLTCPGKPIAPLL---VWKEVEALQFAPPSSKLNWELVYKPMF----GMTTDPAAVEENEVKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADIISSPAWAKV 597
            SRAI +YI +++    G  L      I  L    VW EVEA Q+ P  S + +E +  P      G   +   V+E+  +L  +L +YEARL +S+YLA DS T  DL+H+P     + TP  K+FD  P V AW   +++ PA  +V
Sbjct:   68 SRAIAKYILRKYGGTAGLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSITFADLNHIPFTFYFMTTPYAKVFDDYPKVKAWWEMLMARPAVQRV 215          
BLAST of CB293762 vs. ExPASy Swiss-Prot
Match: GSTF2_WHEAT (Glutathione S-transferase 2 OS=Triticum aestivum GN=GSTA2 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.100e-15
Identity = 53/148 (35.81%), Postives = 78/148 (52.70%), Query Frame = -2
Query:  178 SRAITQYIAQEFPDK-GTQLTCPGKPIAPLL---VWKEVEALQFAPPSSKLNWELVYKPMF----GMTTDPAAVEENEVKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADIISSPAWAKV 597
            SRAI +YI +++    G  L      I  L    VW EVEA Q+ P  S + +E +  P      G   +   V+E+  +L  +L +YEARL +S+YLA DS +  DL+H+P     + TP  K+FD  P V AW   +++ PA  +V
Sbjct:   68 SRAIAKYILRKYGGTAGLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSISFADLNHIPFTFYFMTTPYAKVFDEYPKVKAWWEMLMARPAVQRV 215          
BLAST of CB293762 vs. ExPASy Swiss-Prot
Match: GSTF5_ARATH (Glutathione S-transferase PM239X14 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.312e-12
Identity = 47/131 (35.88%), Postives = 69/131 (52.67%), Query Frame = -2
Query:  211 SRAITQYIAQEFPDKGTQLTCPGKPIAPLLVWK--EVEALQFAPPSSKLNWELVYKPMFGMTTDPAAVEENEVKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAA 597
            SRAI++Y+  ++    + L  P  P A  L  +   VE   F PP+S L +E V+  M G+ T+    ++    L   +D YE  LS+ KYLA + FTL DL HLP    ++      + D++PHV AW A
Sbjct:   70 SRAISRYLVAKYGKGSSLLPSPSDPKAYGLFEQAASVEYSSFDPPASSLAYERVFAGMRGLKTNEELAKKYVDTLNAKMDGYERILSKQKYLAGNDFTLADLFHLP-YGAMVAQLEPTVLDSKPHVKAWWA 199          
The following BLAST results are available for this feature:
BLAST of CB293762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
GSTF3_ARATH1.752e-2142.76Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GSTF1_ORYSJ1.483e-2038.78Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GSTF1_MAIZE1.483e-2040.14Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE... [more]
GSTF7_ARATH3.304e-2039.46Glutathione S-transferase OS=Arabidopsis thaliana ... [more]
GSTF2_ORYSJ5.636e-2039.86Probable glutathione S-transferase GSTF2 OS=Oryza ... [more]
GSTF4_MAIZE9.949e-1743.64Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE... [more]
GSTF1_WHEAT4.937e-1636.49Glutathione S-transferase 1 OS=Triticum aestivum G... [more]
GSTF2_WHEAT1.100e-1535.81Glutathione S-transferase 2 OS=Triticum aestivum G... [more]
GSTF5_ARATH3.312e-1235.88Glutathione S-transferase PM239X14 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ce12_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ce12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293762 ID=CB293762; Name=CB293762; organism=Citrus sinensis; type=EST; length=598bp
GGGAATACAAACTACGAAGCATCAATATTCTGCAGAGATATTGATGACAA
ACGCCAAACAAGAGAATACTAACTCGAAAACCCACCTAATAGGTATTACA
AAAGATAAGTGACCACCGAGGAGCGACTAACGTCTAGAAGGTACCGAGCA
AAGTGTTCAGTGTTTGAGCAAGGGAAGGACCTTAGCCCAAGCCGGGCTGG
AAATGATATCAGCTGCCCATGCGCTAACATGGGGGCGTGCATCAAACAAC
TTCTTGACCGGGGTCCCCAACAACAAATTAATATTGGGGAGATGATGCAA
ATCGACCAAGGTGAAGCTGTCGCACGCCAAGTATTTGGACTGAGACAAAC
GGGCCTCGTAAACATCTAAAATTTTGGCAAGCTTAACTTCATTTTCTTCA
ACCGCAGCTGGATCAGTGGTCATTCCAAACATTGGCTTGTACACGAGCTC
CCAGTTGAGCTTCGATGATGGGGGGGCGAACTGGAGTGCCTCCACCTCCT
TCCATACCAATAACGGGGCGATGGGCTTGCCTGGGCATGTTAACTGGGTG
CCTTTGTCTGGAAACTCCTGGGCGATGTATTGGGTGATTGCCCTTGAT
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