CB293765

Overview
NameCB293765
Unique NameCB293765
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293765 vs. ExPASy Swiss-Prot
Match: AATC_DICDI (Aspartate aminotransferase, cytoplasmic OS=Dictyostelium discoideum GN=aatB PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.153e-42
Identity = 89/187 (47.59%), Postives = 123/187 (65.78%), Query Frame = 2
Query:  143 SVFGKIVRAPEDPILGVTVAYNKDTIPVKLNLGVGAYRTEEGKPLVLNVVRKADQLLLNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNTVTTVQRLSGTGSLRAGAEFLARHYHQLTI-YIPQPTWGNHPKVFTLSGLSVKTYRYYDPATRGLNFQGLLEDLMAAPSGAIVLLHACAHNP 700
            ++F  +   P DPILGV+ A+  DT P K++  VGAYR E GKP VL  V +A++ LL      KEYLPI G+ +FNKLSAKL+ G D+   K+  + TVQ LSGTG+LR G  F+ ++    T+ YI +P+W NH  +   SG+    Y YYDP T+GL+F G++ D+ AAP+G++ +LH CAHNP
Sbjct:   39 TLFANVPLGPVDPILGVSTAFKADTDPRKVDTSVGAYRDENGKPYVLKCVFEAEKRLLGAP---KEYLPIDGIPEFNKLSAKLLYG-DAMVGKEKRMVTVQALSGTGALRIGIIFIRKYLPAGTVVYISRPSWTNHHNICKESGVQSAEYAYYDPKTKGLDFTGMINDMRAAPNGSVFVLHLCAHNP 221          
BLAST of CB293765 vs. ExPASy Swiss-Prot
Match: AAT1_ARATH (Aspartate aminotransferase, mitochondrial OS=Arabidopsis thaliana GN=ASP1 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.833e-41
Identity = 89/191 (46.60%), Postives = 116/191 (60.73%), Query Frame = 2
Query:  128 LMDSESVFGKIVRAPEDPILGVTVAYNKDTIPVKLNLGVGAYRTEEGKPLVLNVVRKADQLLLNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNTVTTVQRLSGTGSLRAGAEFLARHYHQLTIYIPQPTWGNHPKVFTLSGLSVKTYRYYDPATRGLNFQGLLEDLMAAPSGAIVLLHACAHNP 700
            L    S +  +  AP+DPILGVT A+  D  P K+N+GVGAYR + GKP+VL  VR+A++ L    S   EYLP+ G      L+ KL  G +S  IKD  +  VQ LSGTG+ R  A+F  R      IYIP PTW NH  ++  + +  KTY YY P T+GL+F  L++D+  AP G+  LLHACAHNP
Sbjct:   26 LRSMSSWWKSVEPAPKDPILGVTEAFLADPSPEKVNVGVGAYRDDNGKPVVLECVREAEKRLAG--STFMEYLPMGGSAKMVDLTLKLAYGDNSEFIKDKRIAAVQTLSGTGACRLFADFQKRFSPGSQIYIPVPTWSNHHNIWKDAQVPQKTYHYYHPETKGLDFSALMDDVKNAPEGSFFLLHACAHNP 214          
BLAST of CB293765 vs. ExPASy Swiss-Prot
Match: AATC_CAEEL (Probable aspartate aminotransferase, cytoplasmic OS=Caenorhabditis elegans GN=T01C8.5 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.887e-40
Identity = 86/187 (45.99%), Postives = 118/187 (63.10%), Query Frame = 2
Query:  143 SVFGKIVRAPEDPILGVTVAYNKDTIPVKLNLGVGAYRTEEGKPLVLNVVRKADQLLLNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNTVTTVQRLSGTGSLRAGAEFLARHYHQLTIYIPQPTWGNHPKVFTLSGL-SVKTYRYYDPATRGLNFQGLLEDLMAAPSGAIVLLHACAHNP 700
            S F  I  AP   +      Y  +T PVK+NL +GAYRTEEG+P VL VV + +  + ND S   EYLP++G   F K + +L+LGA+SPAIK+     VQ LSGTG+LRAGAEFLA   +  T+Y+  PTWGNH  VF  +G  +V  Y ++D   + ++ +  L DL +AP  ++++LH CAHNP
Sbjct:    2 SFFDGIPVAPPIEVFHKNKMYLDETAPVKVNLTIGAYRTEEGQPWVLPVVHETEVEIANDTSLNHEYLPVLGHEGFRKAATELVLGAESPAIKEERSFGVQCLSGTGALRAGAEFLASVCNMKTVYVSNPTWGNHKLVFKKAGFTTVADYTFWDYDNKRVHIEKFLSDLESAPEKSVIILHGCAHNP 188          
BLAST of CB293765 vs. ExPASy Swiss-Prot
Match: AAT_PSEAE (Aspartate aminotransferase OS=Pseudomonas aeruginosa GN=aspC PE=3 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.291e-39
Identity = 82/186 (44.09%), Postives = 116/186 (62.37%), Query Frame = 2
Query:  143 SVFGKIVRAPEDPILGVTVAYNKDTIPVKLNLGVGAYRTEEGKPLVLNVVRKADQLLLNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNTVTTVQRLSGTGSLRAGAEFLARHYHQLTIYIPQPTWGNHPKVFTLSGLSVKTYRYYDPATRGLNFQGLLEDLMAAPSGAIVLLHACAHNP 700
            S+F  +  AP DPILG+  A+N DT P K+NLGVG Y  EEG+  +L  V+ A++  +   +  + YLPI G+  +++   KL+ G +S  +    V T Q + GTG+L+ GA+FL R     T+ I  P+W NH  +F  +G  V+ YRYYD A+ G+N  GLLEDL A P+ +IV+LHAC HNP
Sbjct:    2 SLFSAVEMAPRDPILGLNEAFNADTRPGKINLGVGVYYNEEGRIPLLRAVQAAEKARIEAHAP-RGYLPIEGIAAYDQGVQKLLFGNESELLAAGRVVTTQAVGGTGALKLGADFLKRLLPDATVAISDPSWENHRALFEAAGFPVQNYRYYDAASNGVNRAGLLEDLNALPARSIVVLHACCHNP 186          
BLAST of CB293765 vs. ExPASy Swiss-Prot
Match: AAT_HAEIN (Aspartate aminotransferase OS=Haemophilus influenzae GN=aspC PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.298e-39
Identity = 77/185 (41.62%), Postives = 114/185 (61.62%), Query Frame = 2
Query:  146 VFGKIVRAPEDPILGVTVAYNKDTIPVKLNLGVGAYRTEEGKPLVLNVVRKADQLLLNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNTVTTVQRLSGTGSLRAGAEFLARHYHQLTIYIPQPTWGNHPKVFTLSGLSVKTYRYYDPATRGLNFQGLLEDLMAAPSGAIVLLHACAHNP 700
            +F  I  AP DPILG+  A+  +T   K+NLG+G Y+  +G   +++ V++A++ L  D+ + K YL I G+ D+N+ +  L+ G DS  I+ N   TVQ L GTG+LR  AEF+ R      ++I  PTW NH  +F   G++++ YRYYD   + L+++ LLEDL  A  G +VLLH C HNP
Sbjct:    1 MFEHIKAAPADPILGLGEAFKSETRENKINLGIGVYKDAQGTTPIMHAVKEAEKRLF-DKEKTKNYLTIDGIADYNEQTKALLFGKDSEVIQSNRARTVQSLGGTGALRIAAEFIKRQTKAQNVWISTPTWPNHNAIFNAVGMTIREYRYYDAERKALDWEHLLEDLSQASEGDVVLLHGCCHNP 184          
BLAST of CB293765 vs. ExPASy Swiss-Prot
Match: AATC_YEAST (Aspartate aminotransferase, cytoplasmic OS=Saccharomyces cerevisiae GN=AAT2 PE=1 SV=3)

HSP 1 Score: 157.147 bits (396), Expect = 8.105e-38
Identity = 76/188 (40.43%), Postives = 111/188 (59.04%), Query Frame = 2
Query:  137 SESVFGKIVRAPEDPILGVTVAYNKDTIPVKLNLGVGAYRTEEGKPLVLNVVRKADQLLLNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNTVTTVQRLSGTGSLRAGAEFLARHYHQLTIYIPQPTWGNHPKVFTLSGLSVKTYRYYDPATRGLNFQGLLEDLMAAPSGAIVLLHACAHNP 700
            S ++F  I   P D + G+   Y +D    K++LG+GAYR + GKP VL  V+ A++L+ ND S   EYL I GL      +AK+I G  S A +++ V +VQ LSGTG+L   A+F ++ +    +Y+ +PTW NH  +F   GL   TY Y+   T+ L+  G L  +  AP G+I +LH+CAHNP
Sbjct:    2 SATLFNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDAFQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNP 189          
BLAST of CB293765 vs. ExPASy Swiss-Prot
Match: AAT_ECOLI (Aspartate aminotransferase OS=Escherichia coli (strain K12) GN=aspC PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.529e-36
Identity = 76/185 (41.08%), Postives = 107/185 (57.84%), Query Frame = 2
Query:  146 VFGKIVRAPEDPILGVTVAYNKDTIPVKLNLGVGAYRTEEGKPLVLNVVRKADQLLLNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNTVTTVQRLSGTGSLRAGAEFLARHYHQLTIYIPQPTWGNHPKVFTLSGLSVKTYRYYDPATRGLNFQGLLEDLMAAPSGAIVLLHACAHNP 700
            +F  I  AP DPILG+   +  D  P K+NLG+G Y+ E GK  VL  V+KA+Q LL +++  K YL I G+ +F + + +L+ G  S  I D    T Q   GTG+LR  A+FLA++     +++  P+W NH  VF  +GL V+ Y YYD     L+F  L+  L  A +G +VL H C HNP
Sbjct:    1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET-TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNP 184          
BLAST of CB293765 vs. ExPASy Swiss-Prot
Match: AAT_SALTI (Aspartate aminotransferase OS=Salmonella typhi GN=aspC PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.405e-36
Identity = 76/185 (41.08%), Postives = 107/185 (57.84%), Query Frame = 2
Query:  146 VFGKIVRAPEDPILGVTVAYNKDTIPVKLNLGVGAYRTEEGKPLVLNVVRKADQLLLNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNTVTTVQRLSGTGSLRAGAEFLARHYHQLTIYIPQPTWGNHPKVFTLSGLSVKTYRYYDPATRGLNFQGLLEDLMAAPSGAIVLLHACAHNP 700
            +F  I  AP DPILG+   +  D  P K+NLG+G Y+ E GK  VL  V+KA+Q LL +++  K YL I G+ +F + + +L+ G  S  I D    T Q   GTG+LR  A+FLA++     +++  P+W NH  VF  +GL V+ Y YYD     L+F+ L   L  A +G +VL H C HNP
Sbjct:    1 MFENITAAPADPILGLADLFRADDRPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET-TKNYLGIDGIPEFARCTQELLFGKGSALINDKRARTAQTPGGTGALRIAADFLAKNTPVKRVWVSNPSWPNHKSVFNAAGLEVREYAYYDAENHSLDFEALQASLSEAQAGDVVLFHGCCHNP 184          
BLAST of CB293765 vs. ExPASy Swiss-Prot
Match: AAT_SALTY (Aspartate aminotransferase OS=Salmonella typhimurium GN=aspC PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.809e-36
Identity = 76/185 (41.08%), Postives = 107/185 (57.84%), Query Frame = 2
Query:  146 VFGKIVRAPEDPILGVTVAYNKDTIPVKLNLGVGAYRTEEGKPLVLNVVRKADQLLLNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNTVTTVQRLSGTGSLRAGAEFLARHYHQLTIYIPQPTWGNHPKVFTLSGLSVKTYRYYDPATRGLNFQGLLEDLMAAPSGAIVLLHACAHNP 700
            +F  I  AP DPILG+   +  D  P K+NLG+G Y+ E GK  VL  V+KA+Q LL +++  K YL I G+ +F + + +L+ G  S  I D    T Q   GTG+LR  A+FLA++     +++  P+W NH  VF  +GL V+ Y YYD     L+F+ L   L  A +G +VL H C HNP
Sbjct:    1 MFENITAAPADPILGLADLFRADDRPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET-TKNYLGIDGIPEFARCTQELLFGKGSALINDKRARTAQTPGGTGALRIAADFLAKNTPVKRVWVSNPSWPNHKSVFNAAGLEVREYAYYDAENHTLDFEALQASLSEAQAGDVVLFHGCCHNP 184          
BLAST of CB293765 vs. ExPASy Swiss-Prot
Match: AATC_SCHPO (Aspartate aminotransferase, cytoplasmic OS=Schizosaccharomyces pombe GN=aat2 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.339e-32
Identity = 72/191 (37.70%), Postives = 111/191 (58.12%), Query Frame = 2
Query:  137 SESVFGKIVRAPEDPILGVTVAYNKDTIPVKLNLGVGAYRTEEGKPLVLNVVRKADQLLLNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNTVTTVQRLSGTGSLRAGAEFLARHYHQLT---IYIPQPTWGNHPKVFTLSGLSVKTYRYYDPATRGLNFQGLLEDLMAAPSGAIVLLHACAHNP 700
            S+  F  I  A  D I  +   Y++D  P K+N+ VGAYR + GKP +L  V+KA +++    S   EYLPI GL  F K +A+++   +   + ++ V ++Q +SGTG+    A F+   Y + T   +YI  PTW  H  ++   G++V TY Y+D   R  +++G+L  + +AP G+I LLHACAHNP
Sbjct:    2 SDYGFANIEEAKADAIFKLNAQYHQDEDPKKVNMSVGAYRDDTGKPWILPAVKKASKIVEEQASFNHEYLPIAGLPRFTKAAAEVLFRPNPHLLSEDRVASMQSVSGTGANFLAASFIETFYVKHTGAHVYISNPTWPVHRTLWEKLGVTVDTYPYWDAKNRSFDYEGMLSTIKSAPEGSIFLLHACAHNP 192          
The following BLAST results are available for this feature:
BLAST of CB293765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
AATC_DICDI4.153e-4247.59Aspartate aminotransferase, cytoplasmic OS=Dictyos... [more]
AAT1_ARATH7.833e-4146.60Aspartate aminotransferase, mitochondrial OS=Arabi... [more]
AATC_CAEEL3.887e-4045.99Probable aspartate aminotransferase, cytoplasmic O... [more]
AAT_PSEAE3.291e-3944.09Aspartate aminotransferase OS=Pseudomonas aerugino... [more]
AAT_HAEIN4.298e-3941.62Aspartate aminotransferase OS=Haemophilus influenz... [more]
AATC_YEAST8.105e-3840.43Aspartate aminotransferase, cytoplasmic OS=Sacchar... [more]
AAT_ECOLI1.529e-3641.08Aspartate aminotransferase OS=Escherichia coli (st... [more]
AAT_SALTI3.405e-3641.08Aspartate aminotransferase OS=Salmonella typhi GN=... [more]
AAT_SALTY5.809e-3641.08Aspartate aminotransferase OS=Salmonella typhimuri... [more]
AATC_SCHPO1.339e-3237.70Aspartate aminotransferase, cytoplasmic OS=Schizos... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06cf02_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06cf02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293765 ID=CB293765; Name=CB293765; organism=Citrus sinensis; type=EST; length=702bp
GCCCTATGTACAGTTAAACTAACCAAACCACTCCGAGGCCACTACTATAT
TAAACCCAAACATAATTTTCTCTTCACATTTTTTTCCCCCACAAACTCTC
TCATTTCATTGATTTCTTGAAAGAAATTTAATGGATTCTGAATCAGTGTT
TGGAAAGATTGTTCGTGCTCCTGAAGATCCCATTCTAGGGGTCACTGTTG
CTTATAACAAGGATACAATCCCAGTCAAGTTGAACTTGGGTGTTGGTGCT
TACCGAACTGAGGAAGGGAAACCTCTGGTTCTGAATGTAGTGAGAAAGGC
AGATCAGCTCTTACTGAATGACCAGTCACGGGTCAAAGAGTATCTTCCCA
TTGTTGGACTTGTGGATTTTAATAAATTGAGTGCAAAGCTCATCCTTGGT
GCTGACAGCCCTGCGATTAAAGACAACACAGTGACCACCGTTCAGCGCTT
GTCTGGCACTGGTTCTTTGAGGGCTGGAGCTGAGTTTCTGGCAAGGCATT
ATCACCAACTTACCATATATATTCCACAGCCAACATGGGGAAACCATCCC
AAAGTTTTCACTTTATCAGGATTGTCTGTGAAGACCTACCGCTATTATGA
TCCAGCAACACGTGGGCTAAACTTCCAAGGCTTGCTGGAGGATCTTATGG
CTGCACCATCCGGAGCTATAGTTCTTCTTCATGCATGTGCTCATAATCCA
AC
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