CB293806
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293806 vs. ExPASy Swiss-Prot
Match: SEH1_OSMMO (Nucleoporin seh1 OS=Osmerus mordax GN=seh1l PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.737e-11 Identity = 63/238 (26.47%), Postives = 108/238 (45.38%), Query Frame = -2 Query: 156 IWKE--GNSNE-------WIKDHVFEDHKSSVNSIDWAPHELGLCMACGSSDGNISVFTARADGGWDTSRIDQAHPV----GVTSVSWAPST----DPGALVGSGFLDPVQKLCSGGRDNTVKVWKLYNGIWKMDCFPALQMHIDWVRDVAWAPNLGLPKFTIASASEDGKVI-IWPVAREGD-----QWEGKVLHDF---KTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQ 791 +W+E G SN+ WIK D ++SV + +AP +GL + S+DG + ++ A + S+ H + + +SW PS+ P VGS D SG V++++ K L D V D+A+APNLG +A A++D ++ + P+ +E + E ++ F + V+RVSW++T +LA + + V LW+ W+ Sbjct: 85 VWEEIVGESNDKQRGLSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIY--EAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSPMIAVGS---DDSNTAYSG----KVQIYEYVENTRKYAKVETLMTVTDPVHDIAFAPNLGRSFHVLAIATKDVRIFKLIPMRKESSSSGPTKLEVQLQAQFDGHNSQVWRVSWNITSTLLASSGDDGCVRLWKANYMDNWK 313
BLAST of CB293806 vs. ExPASy Swiss-Prot
Match: CIAO1_DROWI (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila willistoni GN=Ciao1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.737e-11 Identity = 55/203 (27.09%), Postives = 86/203 (42.36%), Query Frame = -2 Query: 159 IKDHVFEDHKSSVNSIDWAPHELGLCMACGSSDGNISVFTARADGGWDTSRI-DQAHPVGVTSVSWAPSTDPGALVGSGFLDPVQKLCSGGRDNTVKVWKLYNGIWKMDCFPALQMHIDWVRDVAWAPNLGLPKFTIASASEDGKVIIWPVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLW-EEAVDGQW 761 I +H + HK + + W H G A D I +++ + W T I H + + W+P Q L S D T +W +G + +C L+ H + V+ V+W+ + GL +A+ S D V IW VA + + VL+ V RV W T ILA A +N + ++ E A+D W Sbjct: 5 ILEHTLQGHKGRIWGVAW--HPKGNTFASCGEDKAIRIWSLSGNS-WSTKTILSDGHKRTIREIRWSPCG--------------QYLASASFDATTAIWSKSSG--EFECNATLEGHENEVKSVSWSKSGGL----LATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKEILASASYDNTIKMFAESALDSDW 184
BLAST of CB293806 vs. ExPASy Swiss-Prot
Match: CIAO1_DROME (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila melanogaster GN=Ciao1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.737e-11 Identity = 55/203 (27.09%), Postives = 87/203 (42.86%), Query Frame = -2 Query: 159 IKDHVFEDHKSSVNSIDWAPHELGLCMACGSSDGNISVFTARADGGWDTSRI-DQAHPVGVTSVSWAPSTDPGALVGSGFLDPVQKLCSGGRDNTVKVWKLYNGIWKMDCFPALQMHIDWVRDVAWAPNLGLPKFTIASASEDGKVIIWPVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLW-EEAVDGQW 761 I +H + HK + + W H G A D I +++ + W T I H + + W+P Q L S D T +W +G + +C L+ H + V+ V+W+ + GL +A+ S D V IW VA + + VL+ V RV W T +ILA A +N + ++ EE +D W Sbjct: 5 ILEHTLQGHKGRIWGVAW--HPKGNVFASCGEDKAIRIWSLTGNT-WSTKTILSDGHKRTIREIRWSPCG--------------QYLASASFDATTAIWSKSSG--EFECNATLEGHENEVKSVSWSRSGGL----LATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDILASASYDNTIKMFAEEPIDNDW 184
BLAST of CB293806 vs. ExPASy Swiss-Prot
Match: CIAO1_AEDAE (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Aedes aegypti GN=Ciao1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.737e-11 Identity = 55/211 (26.07%), Postives = 96/211 (45.50%), Query Frame = -2 Query: 165 IWKEGNSNEWIKDHVFED-HKSSVNSIDWAPHELGLCMACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTDPGALVGSGFLDPVQKLCSGGRDNTVKVWKLYNGIWKMDCFPALQMHIDWVRDVAWAPNLGLPKFTIASASEDGKVIIWPVAREGDQWEG-KVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDG 791 IW E S W+ V D H ++ + W+P G +A S D ++++ ++ G ++ + + H V SVSW+ S G+L+ + CS RD +V VW++ + +C L H V+ V W P+ + +ASAS D + ++ W L ++ V+ +S+ +GN LA + V +W+E G Sbjct: 40 IWAEDASQRWVAKTVLSDGHSRTIRDVAWSP--CGQYLASASFDATVAIWDKKS-GEFECNATLEGHENEVKSVSWSKS---GSLLAT---------CS--RDKSVWVWEVAQED-EYECAAVLNTHTQDVKKVEWHPHEDI----LASASYDNTIKLYKEDLADSDWSSFDTLVSHESTVWSISFDGSGNRLASCSDDQTVKIWQEYKPG 228
BLAST of CB293806 vs. ExPASy Swiss-Prot
Match: CIAO1_IXOSC (Probable cytosolic iron-sulfur protein assembly protein OS=Ixodes scapularis GN=ISCW023049 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.797e-11 Identity = 52/198 (26.26%), Postives = 84/198 (42.42%), Query Frame = -2 Query: 156 EDHKSSVNSIDWAPHELGLCMACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTDPGALVGSGFLDPVQKLCSGGRDNTVKVWKLYNGIWKMDCFPALQMHIDWVRDVAWAPNLGLPKFTIASASEDGKVIIWPVAREGDQWE-GKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLW-EEAVDGQWQ 743 E H++ V + W+P G +A S D + ++ D ++ + + H V V W P D +L S DNT++ + W+ C+ L H V +++ P P+ +AS + DG V +W + WE L PVY VSW T LA A G+N V ++ ++ D W+ Sbjct: 99 EGHENEVKACGWSPS--GRFLATCSRDKTVWIWEVGEDEEFECASVQTCHSQDVKKVLWHPDRD--------------ELASASYDNTIRFFCEEVDDWQ--CYCTLDKHASTVWGLSFGPG---PEPQLASCAADGSVYVWGTKGDRRSWELCGTLERHPRPVYDVSWCRTRGFLATACGDNAVRVFVKDGGDCSWR 275 HSP 2 Score: 20.7866 bits (42), Expect = 2.797e-11 Identity = 6/8 (75.00%), Postives = 7/8 (87.50%), Query Frame = -1 Query: 130 GDCSWAVG 153 GDCSW +G Sbjct: 270 GDCSWRLG 277
BLAST of CB293806 vs. ExPASy Swiss-Prot
Match: CIAO1_DROSI (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila simulans GN=Ciao1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.574e-11 Identity = 54/203 (26.60%), Postives = 87/203 (42.86%), Query Frame = -2 Query: 159 IKDHVFEDHKSSVNSIDWAPHELGLCMACGSSDGNISVFTARADGGWDTSRI-DQAHPVGVTSVSWAPSTDPGALVGSGFLDPVQKLCSGGRDNTVKVWKLYNGIWKMDCFPALQMHIDWVRDVAWAPNLGLPKFTIASASEDGKVIIWPVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLW-EEAVDGQW 761 I +H + HK + + W H G A D I +++ + W T I H + + W+P Q L S D T +W +G + +C L+ H + V+ V+W+ + GL +A+ S D V IW VA + + VL+ V RV W T ++LA A +N + ++ EE +D W Sbjct: 5 ILEHTLQGHKGRIWGVAW--HPKGNVFASCGEDKAIRIWSLTGNT-WSTKTILSDGHKRTIREIRWSPCG--------------QYLASASFDATTAIWSKSSG--EFECNATLEGHENEVKSVSWSRSGGL----LATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDVLASASYDNTIKMFAEEPIDNDW 184
BLAST of CB293806 vs. ExPASy Swiss-Prot
Match: CIAO1_DROSE (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila sechellia GN=Ciao1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.668e-11 Identity = 51/202 (25.25%), Postives = 86/202 (42.57%), Query Frame = -2 Query: 159 IKDHVFEDHKSSVNSIDWAPHELGLCMACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTDPGALVGSGFLDPVQKLCSGGRDNTVKVWKLYNGIWKMDCFPALQMHIDWVRDVAWAPNLGLPKFTIASASEDGKVIIWPVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLW-EEAVDGQW 761 I +H + HK + + W H G A D I +++ + + + H + + W+P Q L S D T +W +G + +C L+ H + V+ V+W+ + GL +A+ S D V IW VA + + VL+ V RV W T ++LA A +N + ++ EE +D W Sbjct: 5 ILEHTLQGHKGRIWGVAW--HPKGNVFASCGEDKAIRIWSLTGNTWGTKTILSDGHKRTIREIRWSPCG--------------QYLASASFDATTAIWSKSSG--EFECNATLEGHENEVKSVSWSRSGGL----LATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDVLASASYDNTIKMFAEEPIDNDW 184
BLAST of CB293806 vs. ExPASy Swiss-Prot
Match: CIAO1_DROAN (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila ananassae GN=Ciao1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.668e-11 Identity = 51/203 (25.12%), Postives = 86/203 (42.36%), Query Frame = -2 Query: 150 DHVFEDHKSSVNSIDWAPHELGLCMACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTDPGALVGSGFLDPVQKLCSGGRDNTVKVWKLYNGIWKMDCFPALQMHIDWVRDVAWAPNLGLPKFTIASASEDGKVIIWPVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLW-EEAVDGQWQQV 755 +H + HK + + W H G A D I +++ + + + H + + W+P Q L S D T +W +G + +C L+ H + V+ V+W+ + GL +A+ S D V IW VA + + VL+ V RV W T +LA A +N + ++ E+A+D W V Sbjct: 7 EHTLQGHKGRIWGVAW--HPKGNVFASCGEDKAIRIWSLNGNTWTTKTILSDGHKRTIREIRWSPCG--------------QYLASASFDGTTAIWSKSSG--EFECNATLEGHENEVKSVSWSRSGGL----LATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKELLASASYDNTIKMFAEDALDSDWDCV 187
BLAST of CB293806 vs. ExPASy Swiss-Prot
Match: CIAO1_DROER (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila erecta GN=Ciao1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.097e-11 Identity = 54/203 (26.60%), Postives = 85/203 (41.87%), Query Frame = -2 Query: 159 IKDHVFEDHKSSVNSIDWAPHELGLCMACGSSDGNISVFTARADGGWDTSRI-DQAHPVGVTSVSWAPSTDPGALVGSGFLDPVQKLCSGGRDNTVKVWKLYNGIWKMDCFPALQMHIDWVRDVAWAPNLGLPKFTIASASEDGKVIIWPVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLW-EEAVDGQW 761 I +H + HK + + W H G A D I +++ W T I H + + W+P Q L S D T +W +G + +C L+ H + V+ V+W+ + GL +A+ S D V IW VA + + VL+ V RV W T +LA A +N + ++ E+ VD W Sbjct: 5 ILEHTLQGHKGRIWGVAW--HPKGNVFASCGEDKAIRIWSLTGST-WSTKTILSDGHKRTIREIRWSPCG--------------QYLASASFDATTAIWSKSSG--EFECNATLEGHENEVKSVSWSRSGGL----LATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKEVLASASYDNTIKMYAEDPVDNDW 184 The following BLAST results are available for this feature:
BLAST of CB293806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293806 ID=CB293806; Name=CB293806; organism=Citrus sinensis; type=EST; length=795bpback to top |