CB293835

Overview
NameCB293835
Unique NameCB293835
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293835 vs. ExPASy Swiss-Prot
Match: LGMN_RAT (Legumain OS=Rattus norvegicus GN=Lgmn PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 5.130e-62
Identity = 117/229 (51.09%), Postives = 158/229 (69.00%), Query Frame = 3
Query:   54 GGGGAKVN-DDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTG-GSGKVVDIGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEETSWGTYCPGEIPGPPPEYSTCLGD 734
            G G   +  DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE IIV MYDDIA NEENP PGV+IN P+G DVYKGVPKDYTGEDVT ENF AV+ G++ A+ G GSGKV+  GP DH+F++++DHG  G+L  P +  ++  +L   ++  +    Y+ +VFY+EACESGS+    LP+ +++YATTA+N  E+S+  Y          E ST LGD
Sbjct:   14 GAGAVHIGVDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIIVMMYDDIANNEENPTPGVVINRPNGTDVYKGVPKDYTGEDVTPENFLAVLRGDEEAVKGKGSGKVLKSGPRDHVFVYFTDHGATGILVFP-NEDLHVKDLNKTIRYMYEHKMYQKMVFYIEACESGSMMNH-LPDDIDVYATTAANPNESSYACYY-------DEERSTYLGD 233          
BLAST of CB293835 vs. ExPASy Swiss-Prot
Match: LGMN_HUMAN (Legumain OS=Homo sapiens GN=LGMN PE=1 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.546e-61
Identity = 108/209 (51.67%), Postives = 152/209 (72.73%), Query Frame = 3
Query:   57 GGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTG-GSGKVVDIGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEETSWGTY 680
            G GA   DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE I+V MYDDIA++E+NP PG++IN P+G DVY+GVPKDYTGEDVT +NF AV+ G+  A+ G GSGKV+  GP DH+FI+++DHG  G+L  P +  ++  +L + +   +    Y+ +VFY+EACESGS+    LP+ +N+YATTA+N  E+S+  Y
Sbjct:   14 GIGAVPIDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKVLKSGPQDHVFIYFTDHGSTGILVFP-NEDLHVKDLNETIHYMYKHKMYRKMVFYIEACESGSMMNH-LPDNINVYATTAANPRESSYACY 220          
BLAST of CB293835 vs. ExPASy Swiss-Prot
Match: LGMN_MACFA (Legumain OS=Macaca fascicularis GN=LGMN PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.343e-61
Identity = 107/209 (51.20%), Postives = 152/209 (72.73%), Query Frame = 3
Query:   57 GGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTG-GSGKVVDIGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEETSWGTY 680
            G GA   DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE I+V MYDDIA++E+NP PG++IN P+G DVY+GVPKDYTGEDVT +NF AV+ G+  A+ G GSGKV+  GP DH+F++++DHG  G+L  P +  ++  +L + +   +    Y+ +VFY+EACESGS+    LP+ +N+YATTA+N  E+S+  Y
Sbjct:   14 GIGAVPIDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKVLKSGPQDHVFVYFTDHGSTGILVFP-NEDLHVKDLNETIYYMYKHKMYRKMVFYIEACESGSMMNH-LPDNINVYATTAANPRESSYACY 220          
BLAST of CB293835 vs. ExPASy Swiss-Prot
Match: LGMN_PONAB (Legumain OS=Pongo abelii GN=LGMN PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 9.675e-61
Identity = 106/207 (51.21%), Postives = 151/207 (72.95%), Query Frame = 3
Query:   63 GAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTG-GSGKVVDIGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEETSWGTY 680
            GA   DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE I+V MYDDIA++E+NP PG++IN P+G DVY+GVPKDYTGEDVT +NF AV+ G+  A+ G GSGKV+  GP DH+F++ +DHG  G+L  P +  ++ ++L + +   +    Y+ +VFY+EACESGS+    LP+ +N+YATTA+N  E+S+  Y
Sbjct:   16 GAVPIDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKVLKSGPQDHVFVYSTDHGSTGILVFP-NEDLHVEDLNETIHYMYKHKMYRKMVFYIEACESGSMMNH-LPDNINVYATTAANPRESSYACY 220          
BLAST of CB293835 vs. ExPASy Swiss-Prot
Match: LGMN_MOUSE (Legumain OS=Mus musculus GN=Lgmn PE=1 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.650e-60
Identity = 112/211 (53.08%), Postives = 150/211 (71.09%), Query Frame = 3
Query:   54 GGGGAKVN-DDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTG-GSGKVVDIGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEETSWGTY 680
            G G   V  DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE IIV MYDDIA +EENP PGV+IN P+G DVYKGV KDYTGEDVT ENF AV+ G+  A+ G GSGKV+  GP DH+FI+++DHG  G+L  P    ++  +L   ++  +    Y+ +VFY+EACESGS+    LP+ +N+YATTA+N +E+S+  Y
Sbjct:   14 GAGAVPVGVDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIIVMMYDDIANSEENPTPGVVINRPNGTDVYKGVLKDYTGEDVTPENFLAVLRGDAEAVKGKGSGKVLKSGPRDHVFIYFTDHGATGILVFPNDD-LHVKDLNKTIRYMYEHKMYQKMVFYIEACESGSMMNH-LPDDINVYATTAANPKESSYACY 222          
BLAST of CB293835 vs. ExPASy Swiss-Prot
Match: LGMN_BOVIN (Legumain OS=Bos taurus GN=LGMN PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 4.065e-59
Identity = 111/227 (48.90%), Postives = 157/227 (69.16%), Query Frame = 3
Query:   57 GGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTG-GSGKVVDIGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEETSWGTYCPGEIPGPPPEYSTCLGD 734
            G GA   +D +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE IIV MYDDIA +E+NP PG++IN P+G DVY+GV KDYTGEDVT +NF AV+ G+  A+ G GSGKV+  GP DH+F++++DHG  G+L  P +  ++  +L + ++  +    Y+ +VFY+EACESGS+   L P+ +N+YATTA+N  E+S+  Y          + ST LGD
Sbjct:   14 GTGAVPLEDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIVHRNGIPDEQIIVMMYDDIANSEDNPTPGIVINRPNGSDVYQGVLKDYTGEDVTPKNFLAVLRGDAEAVKGVGSGKVLKSGPRDHVFVYFTDHGATGILVFP-NEDLHVKDLNETIRYMYEHKMYQKMVFYIEACESGSMMNHLPPD-INVYATTAANPRESSYACYY-------DEQRSTFLGD 231          
BLAST of CB293835 vs. ExPASy Swiss-Prot
Match: HGLB_SCHJA (Hemoglobinase OS=Schistosoma japonicum GN=HAEM PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.014e-54
Identity = 108/212 (50.94%), Postives = 137/212 (64.62%), Query Frame = 3
Query:  102 RWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTGGSGKVVDIGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEETSWGTYCPGEIPGPPPEYSTCLGDL 737
            +WAVL+AGSNGF NYRHQAD+CHAY +L   G+K E+II FMYDDIA N+ENP PG I N     D YKGV  DY G+ V  + F  V+ G+K A     GKV+  G ND +FI+++DHG PG+L  P    ++A   I+ LK       Y  LV Y+EACESGS+F GLLP  +NIYATTA+  +E+S+ T+C        P  S+CL DL
Sbjct:   31 KWAVLVAGSNGFENYRHQADVCHAYHVLLSKGVKPEHIITFMYDDIAHNKENPFPGKIFNDYRHKDYYKGVVIDYKGKKVNPKTFLQVLKGDKRA----GGKVLKSGKNDDVFIYFTDHGAPGILAFPDDD-LHAKPFINTLKYLRQHRRYSKLVIYVEACESGSMFAGLLPTDINIYATTAARPDESSYATFC------DDPRISSCLADL 231          
BLAST of CB293835 vs. ExPASy Swiss-Prot
Match: HGLB_SCHMA (Hemoglobinase OS=Schistosoma mansoni PE=1 SV=3)

HSP 1 Score: 210.69 bits (535), Expect = 6.715e-54
Identity = 106/223 (47.53%), Postives = 146/223 (65.47%), Query Frame = 3
Query:   69 KVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTGGSGKVVDIGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEETSWGTYCPGEIPGPPPEYSTCLGDL 737
            +V+D+  S   +WAVL+AGSNG+ NYRHQAD+CHAY +LR  G+K E+II  MYDDIA+N  NP PG + N  +  D Y+GV  DY G++V  + F  V+ G+K+A     GKV+  G ND +FI+++DHG PG++  P    +YA E +  LK  H+   Y  LV Y+EA ESGS+F+ +LP  L+IYATTA+N+ E S+ T+C        P  +TCL DL
Sbjct:   26 EVSDETVSDNNKWAVLVAGSNGYPNYRHQADVCHAYHVLRSKGIKPEHIITMMYDDIAYNLMNPFPGKLFNDYNHKDWYEGVVIDYRGKNVNSKTFLKVLKGDKSA----GGKVLKSGKNDDVFIYFTDHGAPGLIAFPDDE-LYAKEFMSTLKYLHSHKRYSKLVIYIEANESGSMFQQILPSNLSIYATTAANSTECSYSTFC------GDPTITTCLADL 237          
BLAST of CB293835 vs. ExPASy Swiss-Prot
Match: GPI8_DROME (Putative GPI-anchor transamidase OS=Drosophila melanogaster GN=CG4406 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.694e-23
Identity = 67/195 (34.36%), Postives = 103/195 (52.82%), Query Frame = 3
Query:  105 WAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHP------HGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTGGSGKVV-DIGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEETS 668
            WAVL+  S  ++NYRH A++   Y+ +++ G+ D  II+ + DD+A N  NPRPG + N+       +GDD    V  DY G +VTVENF  ++ G     T  S K++ D G N  + I+ + HGG G L    S  I + EL D +++      Y  L F ++ C++ S++E       N+ A  +S   E S
Sbjct:   47 WAVLVDASRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMIADDMACNARNPRPGQVYNNANQHINVYGDD----VEVDYRGYEVTVENFVRLLTGRTQNGTARSKKLLSDAGSN--VLIYLTGHGGDGFLKFQDSEEITSQELADGIQQMWEKKRYNELFFMVDTCQAASLYEKFTSP--NVLAVASSLVGEDS 233          
BLAST of CB293835 vs. ExPASy Swiss-Prot
Match: GPI8_YEAST (GPI-anchor transamidase OS=Saccharomyces cerevisiae GN=GPI8 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.510e-21
Identity = 59/199 (29.65%), Postives = 106/199 (53.27%), Query Frame = 3
Query:  105 WAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINH-PHGDDVY-KGVPKDYTGEDVTVENFFAVVLGNKTALTGGSGKVVDIGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEETSWGTYCPGEI 695
            WAVL++ S  ++NYRH A++   Y+ +++ G+ D  II+ + DD+A N  N  PG + N+  H  D+Y   V  DY G +VTVENF  ++    T     S +++    N +IFI+ + HGG   L    +  I ++++ D  ++ +    Y  + F ++ C++ +++        NI A  +S  +E+S+  +   EI
Sbjct:   39 WAVLVSTSRFWFNYRHMANVLSMYRTVKRLGIPDSQIILMLSDDVACNSRNLFPGSVFNNKDHAIDLYGDSVEVDYRGYEVTVENFIRLLTDRWTEDHPKSKRLL-TDENSNIFIYMTGHGGDDFLKFQDAEEIASEDIADAFQQMYEKKRYNEIFFMIDTCQANTMYSKFYSP--NILAVGSSEMDESSYSHHSDVEI 234          
The following BLAST results are available for this feature:
BLAST of CB293835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
LGMN_RAT5.130e-6251.09Legumain OS=Rattus norvegicus GN=Lgmn PE=2 SV=1[more]
LGMN_HUMAN2.546e-6151.67Legumain OS=Homo sapiens GN=LGMN PE=1 SV=1[more]
LGMN_MACFA4.343e-6151.20Legumain OS=Macaca fascicularis GN=LGMN PE=2 SV=1[more]
LGMN_PONAB9.675e-6151.21Legumain OS=Pongo abelii GN=LGMN PE=2 SV=1[more]
LGMN_MOUSE1.650e-6053.08Legumain OS=Mus musculus GN=Lgmn PE=1 SV=1[more]
LGMN_BOVIN4.065e-5948.90Legumain OS=Bos taurus GN=LGMN PE=1 SV=1[more]
HGLB_SCHJA3.014e-5450.94Hemoglobinase OS=Schistosoma japonicum GN=HAEM PE=... [more]
HGLB_SCHMA6.715e-5447.53Hemoglobinase OS=Schistosoma mansoni PE=1 SV=3[more]
GPI8_DROME4.694e-2334.36Putative GPI-anchor transamidase OS=Drosophila mel... [more]
GPI8_YEAST1.510e-2129.65GPI-anchor transamidase OS=Saccharomyces cerevisia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06db04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06db04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293835 ID=CB293835; Name=CB293835; organism=Citrus sinensis; type=EST; length=737bp
GCACTAGGGACATTCTGAAGCTACCATCGGAAGCCTATAGGTTCTTCCAT
AATGGTGGGGGAGGGGCAAAGGTCAACGATGATGATGATTCTGTCGGCAC
GAGATGGGCCGTCCTGCTTGCCGGATCTAATGGCTTCTGGAATTACAGGC
ATCAGGCTGATATTTGTCATGCTTATCAACTCTTGAGGAAAGGTGGGCTG
AAGGATGAAAATATTATTGTTTTCATGTATGATGACATCGCTTTCAATGA
AGAGAACCCAAGGCCTGGAGTCATCATTAACCACCCCCATGGCGATGATG
TTTACAAAGGAGTTCCAAAGGATTACACGGGGGAAGATGTTACTGTTGAA
AACTTTTTTGCTGTTGTCCTGGGAAATAAAACAGCTCTTACAGGGGGCAG
TGGGAAGGTTGTGGATATCGGCCCCAATGATCATATTTTCATATTCTACT
CAGATCATGGGGGCCCTGGGGTGCTAGGGATGCCCACCAGTCGATACATA
TATGCTGATGAACTGATCGATGTCTTAAAAAAGAAGCATGCTTCTGGGAA
CTACAAAAGCTTGGTATTTTATCTCGAAGCCTGTGAATCTGGAAGTATCT
TTGAGGGTCTTCTTCCTGAGGGCTTAAATATCTATGCAACCACAGCTTCA
AATGCTGAAGAGACCAGTTGGGGGACCTATTGTCCTGGAGAGATTCCTGG
TCCTCCCCCTGAATATAGCACTTGTTTGGGTGACTTG
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