CB293838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293838 vs. ExPASy Swiss-Prot
Match: PEL21_ARATH (Putative pectate lyase 21 OS=Arabidopsis thaliana GN=At5g55720 PE=2 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.915e-63 Identity = 117/205 (57.07%), Postives = 144/205 (70.24%), Query Frame = -1 Query: 167 ADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDT-AASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXAKSSSMVGSITSGAGALTCRKSRQC 778 +DGD ISIF S IWIDH +L C DGL+DAV GST ITISN++M +HNEVMLLGHSD Y+ D+ M+VTIA+N+FGEGL+QRMPRCRHGYFH+VNN Y W+MYAIGGSANPTI SQGN + A N F KEVTKR +WK WNW+SEGD ++NGA+FTP A+ +S++ + G L+C + C Sbjct: 188 SDGDGISIFESRDIWIDHCTLEKCYDGLIDAVNGSTDITISNSYMLNHNEVMLLGHSDEYSGDRDMRVTIAFNYFGEGLVQRMPRCRHGYFHIVNNIYRDWKMYAIGGSANPTIFSQGNVFIASNNQFTKEVTKRESADGDEEWKEWNWKSEGDEMVNGAFFTPSGKEDSPSYAKFSSMVARPASLLKTTHPSVGVLSCEIDQAC 392
BLAST of CB293838 vs. ExPASy Swiss-Prot
Match: PEL6_ARATH (Probable pectate lyase 6 OS=Arabidopsis thaliana GN=At2g02720 PE=2 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.621e-62 Identity = 115/224 (51.34%), Postives = 149/224 (66.52%), Query Frame = -1 Query: 167 MVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXAK------SSSMVGSITSGAGALTCRKSRQC 820 ++ S H+G RTV+DGD I+IFG++++WIDH S++ C+DG++DA+MGSTAITISN+H T H+EVML G ++ DK+MQ+T+A+NHFG+ L QRMPR R G HVVNNDYTHWEMYAIGG+ NPTI SQGNR+ AP +K+VTKR T +WK WNW+SE D LNGAYF K + V +T AG L C+ + C Sbjct: 232 LIIDSEQHFGLRTVSDGDGINIFGATNVWIDHVSMTDCSDGMIDAIMGSTAITISNSHFTDHDEVMLFGGTNKDVIDKKMQITVAFNHFGKRLKQRMPRVRFGLVHVVNNDYTHWEMYAIGGNMNPTIISQGNRFIAPPIEDSKQVTKREYTPYPEWKSWNWQSEKDYFLNGAYFVQSGKANAWSATPKNPIPRKFAIRPQPGTKVRRLTKDAGTLGCKPGKSC 455
BLAST of CB293838 vs. ExPASy Swiss-Prot
Match: PEL17_ARATH (Putative pectate lyase 17 OS=Arabidopsis thaliana GN=At4g22090 PE=3 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.678e-59 Identity = 110/218 (50.46%), Postives = 146/218 (66.97%), Query Frame = -1 Query: 167 VRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXAKS-SSMVGSITSGAGALTCRKSRQC 817 VRSSPTH G R +DGDAI+IFGSS++WIDH L+ C DGL+D + STAITISNN+ T H++VMLLGH+D++ +D +M+VT+A+NHFG GL++RMPR R GY HV NN Y W MYAIGGSA+PTI S+GN + A +++KEVTKR W W WR+ D+ NGA+F P + ++V S+T+ AG L C ++ C Sbjct: 178 VRSSPTHVGHRKGSDGDAITIFGSSNVWIDHCYLASCTDGLIDVIHASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERMPRVRRGYAHVANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSYSKEVTKR--EVKGGWNNWRWRTSNDVFKNGAFFVPSGYGSIPLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393
BLAST of CB293838 vs. ExPASy Swiss-Prot
Match: PEL16_ARATH (Probable pectate lyase 16 OS=Arabidopsis thaliana GN=At4g22080 PE=2 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 4.882e-59 Identity = 112/219 (51.14%), Postives = 144/219 (65.75%), Query Frame = -1 Query: 167 MVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXAKS-SSMVGSITSGAGALTCRKSRQC 820 MVRSSPTH G R +DGDAI+IFGSS+IWIDH L+ C DGL+D + ST ITISNN+ T H++VMLLGH+D + +D +M+VT+A+NHFG GL++RMPR R GY HV NN Y W MYAIGGSA+PTI S+GN + A + +KEVTKR W W WR+ D+ NGAYF P + ++V S+T+ AG L C ++ C Sbjct: 177 MVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVIHASTGITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAHVANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSNSKEVTKR--EVKGGWNNWRWRTSKDVFKNGAYFVPSGYGSISLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393
BLAST of CB293838 vs. ExPASy Swiss-Prot
Match: PEL2_ARATH (Putative pectate lyase 2 OS=Arabidopsis thaliana GN=At1g11920 PE=2 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.855e-58 Identity = 118/224 (52.68%), Postives = 143/224 (63.84%), Query Frame = -1 Query: 167 VRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNAPLNAFAKE------VTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXAKS-SSMVGSITSGAGALTCRKSRQC 817 VRSSPTH G R +DGDAI+IF SSHIWIDH S C DGL+D + STA+TISNN+ T H++VMLLGH+D+ DK M+VTIA+NHFG GLI+RMPR R GY HV NN Y W+MYAIGGSA+PTI S+GN + A + K+ VTKR+D + WK W WR+ D+ NGAYF P S S+V +TS AG L C R C Sbjct: 168 VRSSPTHVGSRKGSDGDAIAIFDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDNNVEDKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGNYFVASDDPSKKQVSSFKIVTKRID-SGYDWKRWKWRTSKDVFKNGAYFVPSGYGTVTPLYGRAERFPVSHGSLVPLLTSSAGPLHCYSGRIC 390
BLAST of CB293838 vs. ExPASy Swiss-Prot
Match: PEL_TOBAC (Pectate lyase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.679e-57 Identity = 116/221 (52.49%), Postives = 138/221 (62.44%), Query Frame = -1 Query: 167 MVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAAS--QWKGWNWRSEGDLLLNGAYFTP-XXXXXXXXXXXXXXXXAKSSSMVGSITSGAGALTCRKSRQC 820 ++R S H G R +GD ISIF S IWIDH S+S DGL+DAV ST ITISN H T H +VML G +D Y DK M++T+AYNHFG+ L QRMPRCR G+FH+VNNDYTHWE YAIGGS+ TI SQGNR+ A KEVT R AS +W W W S+GD + NGA FTP + SS VG +T +GAL+C K R C Sbjct: 177 LLRESEDHVGLRGSDEGDGISIFSSHDIWIDHISMSRATDGLIDAVAASTNITISNCHFTDHEKVMLFGANDHYVLDKDMKITLAYNHFGKRLDQRMPRCRFGFFHLVNNDYTHWERYAIGGSSGATIISQGNRFIAEDELLVKEVTYREKLTASVAEWMKWTWISDGDDMENGATFTPSGDQNLLDKIDHLNLIKPEPSSKVGILTKFSGALSCVKGRPC 397
BLAST of CB293838 vs. ExPASy Swiss-Prot
Match: PEL56_SOLLC (Probable pectate lyase P56 OS=Solanum lycopersicum GN=LAT56 PE=2 SV=2) HSP 1 Score: 218.009 bits (554), Expect = 5.052e-56 Identity = 113/221 (51.13%), Postives = 139/221 (62.90%), Query Frame = -1 Query: 167 MVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAAS--QWKGWNWRSEGDLLLNGAYFTP-XXXXXXXXXXXXXXXXAKSSSMVGSITSGAGALTCRKSRQC 820 ++R S H G R +GDAISIF S IWIDH S+S DGL+DAV GST ITISN H T H +VML G +D D+ M++T+AYNHFG+ L QRMPRCR G+FH+VNNDYTHWE YAIGGS+ TI SQGNR+ A KEVT R + +S +W W W ++GD NGA FTP + SS VG +T +GAL+C+ R C Sbjct: 178 LLRESDDHLGLRGADEGDAISIFNSHDIWIDHISMSRATDGLIDAVAGSTNITISNCHFTDHEKVMLFGANDHAEEDRGMKITLAYNHFGKRLDQRMPRCRFGFFHLVNNDYTHWERYAIGGSSGATIISQGNRFIAEDKLLVKEVTYREKSTSSVEEWMKWTWITDGDDFENGATFTPSGDQNLLSKIDHLNLIQPEPSSKVGLLTKFSGALSCKIRRPC 398
BLAST of CB293838 vs. ExPASy Swiss-Prot
Match: PEL4_ARATH (Probable pectate lyase 4 OS=Arabidopsis thaliana GN=At1g30350 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.244e-54 Identity = 105/203 (51.72%), Postives = 130/203 (64.04%), Query Frame = -1 Query: 167 DGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXAKSSSMVGSITSGAGALTCRKSRQC 775 DGD I +F S+H+WIDH LS C DGL+D ++ STA+TISNN+ T H++VMLLGH DSY DK M+VTIA+N FG GLI+RMPR R GY HV NN Y W+MYAIGGSANP I S+GN + AP +K+VTKR+ A K W W + D+ +NGA+F P S+V S+TS AG L C R C Sbjct: 167 DGDGIRVFQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSYMGDKDMRVTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNYFVAPEKRSSKQVTKRM-MAGPDSKRWKWGTSRDVFMNGAFFGPPGVIVRPLYKGGEGFRVAHGSLVPSLTSSAGPLRCYVGRIC 368
BLAST of CB293838 vs. ExPASy Swiss-Prot
Match: MPAJ1_JUNAS (Major pollen allergen Jun a 1 OS=Juniperus ashei PE=1 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.205e-49 Identity = 91/161 (56.52%), Postives = 116/161 (72.05%), Query Frame = -1 Query: 296 DGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVD-TAASQWKGWNWRSEGDLLLNGAYF 775 DGDAI++ ++ WIDHNSLS C+DGL+D +GST ITISNNH +H++VMLLGH D+Y DK M+VT+A+N FG QRMPR R+G HV NN+Y W +YAIGGS+NPTI S+GN + AP ++ KEVTKR+ + S W WRS D +NGAYF Sbjct: 170 DGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVHVANNNYDPWNIYAIGGSSNPTILSEGNSFTAPSESYKKEVTKRIGCESPSACANWVWRSTRDAFINGAYF 330
BLAST of CB293838 vs. ExPASy Swiss-Prot
Match: MPAC1_CUPAR (Major pollen allergen Cup a 1 OS=Cupressus arizonica PE=1 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.056e-49 Identity = 91/161 (56.52%), Postives = 114/161 (70.81%), Query Frame = -1 Query: 296 DGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVD-TAASQWKGWNWRSEGDLLLNGAYF 775 DGDAI++ ++ WIDHNSLS C+DGL+D +GST ITISNNH +H++VMLLGH D+Y DK M+VT+A+N FG QRMPR R+G HV NN+Y W +YAIGGS+NPTI S+GN + AP ++ KEVTKR+ S W WRS D NGAYF Sbjct: 149 DGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVHVANNNYDQWNIYAIGGSSNPTILSEGNSFTAPNESYKKEVTKRIGCETTSACANWVWRSTRDAFTNGAYF 309 The following BLAST results are available for this feature:
BLAST of CB293838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293838 ID=CB293838; Name=CB293838; organism=Citrus sinensis; type=EST; length=820bpback to top |