CB293839
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293839 vs. ExPASy Swiss-Prot
Match: MPAJ1_JUNAS (Major pollen allergen Jun a 1 OS=Juniperus ashei PE=1 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 6.832e-52 Identity = 99/195 (50.77%), Postives = 133/195 (68.21%), Query Frame = 3 Query: 213 SCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGG-CITIQFVTNVIIHGLHVHDCKPT--GNAMVRSS----PTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAI 776 SC + NPID CWR D NW +NR +LADC +GFG + +GG+ G FY VT DD+PVNP PGTLR+ ++K LWI+F ++M I+LK L V KTIDGRGA+VH+ NGG C+ ++ V++VI+H LH+H C + G+ +V S P H DGDAI++ ++ WIDHNSLS C+DGL+D +GST I Sbjct: 18 SCYSDNPIDSCWRGDSNWDQNRMKLADCAVGFGSSTMGGKGGDFYTVTST-DDNPVNPTPGTLRYGATREKALWIIFSQNMNIKLKMPLYVAGHKTIDGRGADVHLGNGGPCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVH-----AQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGI 206
BLAST of CB293839 vs. ExPASy Swiss-Prot
Match: MPA12_AMBAR (Pollen allergen Amb a 1.2 OS=Ambrosia artemisiifolia PE=1 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 8.923e-52 Identity = 103/212 (48.58%), Postives = 135/212 (63.68%), Query Frame = 3 Query: 141 PDEIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAI 776 P A VE ++ E R+ +C N ID CWRC +W NR+ LADC GF + GG+ G Y VT +DDD NPK GTLR A Q++PLWI+FKR+MVI L QEL+VNS KTIDGRG V+I N G +T+ V N+IIH +++HD K M++S+ R +DGDAI++ GSS IWIDH SLS +DGL+D +GS+ + Sbjct: 22 PVRSAEDVEEFLPSANETRR-SLKACEAHNIIDKCWRCKADWANNRQALADCAQGFAKGTYGGKHGDVYTVTSDKDDDVANPKEGTLRFAAAQNRPLWIIFKRNMVIHLNQELVVNSDKTIDGRGVKVNIVNAG-LTLMNVKNIIIHNINIHDIKVCPGGMIKSNDGPPILRQQSDGDAINVAGSSQIWIDHCSLSKASDGLLDITLGSSHV 231
BLAST of CB293839 vs. ExPASy Swiss-Prot
Match: SBP_CRYJA (Sugi basic protein OS=Cryptomeria japonica PE=1 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 1.988e-51 Identity = 97/195 (49.74%), Postives = 133/195 (68.21%), Query Frame = 3 Query: 213 SCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGG-CITIQFVTNVIIHGLHVHDCKPT--GNAMVRSS----PTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAI 776 SC + NPID CWR D NW +NR +LADC +GFG + +GG+ G Y VT+ DDDPVNP PGTLR+ +D+PLWI+F +M I+LK + + +KT DGRGA V+I NGG C+ I+ V+NVIIHGLH++ C + GN ++ S P H DGDA+++ +++IWIDHNS S+ +DGLVD + ST + Sbjct: 18 SCFSDNPIDSCWRGDSNWAQNRMKLADCAVGFGSSTMGGKGGDLYTVTNS-DDDPVNPAPGTLRYGATRDRPLWIIFSGNMNIKLKMPMYIAGYKTFDGRGAQVYIGNGGPCVFIKRVSNVIIHGLHLYGCSTSVLGNVLINESFGVEPVH-----PQDGDALTLRTATNIWIDHNSFSNSSDGLVDVTLSSTGV 206
BLAST of CB293839 vs. ExPASy Swiss-Prot
Match: MPAC1_CHAOB (Major pollen allergen Cha o 1 OS=Chamaecyparis obtusa PE=1 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.749e-50 Identity = 95/195 (48.72%), Postives = 131/195 (67.18%), Query Frame = 3 Query: 213 SCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGG-CITIQFVTNVIIHGLHVHDCKP--TGNAMVRSS----PTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAI 776 SC + NPID CWR D NW +NR +LADC +GFG +A+GG+ G FY VT DDDPVNP PGTLR+ +++ LWI+F +++ I+L L + KTIDGRGA VHI NGG C+ ++ V++VI+HGL++H C +GN ++ + P H DGDAI++ + +WIDHNSLS +DGLVD + ST + Sbjct: 18 SCFSDNPIDSCWRGDANWDQNRMKLADCAVGFGSSAMGGKGGAFYTVTSS-DDDPVNPAPGTLRYGATRERSLWIIFSKNLNIKLNMPLYIAGNKTIDGRGAEVHIGNGGPCLFMRTVSHVILHGLNIHGCNTSVSGNVLISEASGVVPVH-----AQDGDAITMRNVTDVWIDHNSLSDSSDGLVDVTLASTGV 206
BLAST of CB293839 vs. ExPASy Swiss-Prot
Match: MPA13_AMBAR (Pollen allergen Amb a 1.3 OS=Ambrosia artemisiifolia PE=1 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 6.395e-50 Identity = 98/188 (52.13%), Postives = 121/188 (64.36%), Query Frame = 3 Query: 213 SCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAI 776 +C N ID CWR +W NR+ LADC GF + GG+ G Y VT DDD NPK GTLR A Q++PLWI+FK DMVI L QEL+VNS KTIDGRG V I NGG +T+ V N+IIH +++HD K M++S+ R +DGD I++ GSS IWIDH SLS DGLVD +GST + Sbjct: 44 ACEALNIIDKCWRGKADWENNRQALADCAQGFAKGTYGGKWGDVYTVTSNLDDDVANPKEGTLRFAAAQNRPLWIIFKNDMVINLNQELVVNSDKTIDGRGVKVEIINGG-LTLMNVKNIIIHNINIHDVKVLPGGMIKSNDGPPILRQASDGDTINVAGSSQIWIDHCSLSKSFDGLVDVTLGSTHV 230
BLAST of CB293839 vs. ExPASy Swiss-Prot
Match: MPAC1_CUPAR (Major pollen allergen Cup a 1 OS=Cupressus arizonica PE=1 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.174e-49 Identity = 94/190 (49.47%), Postives = 129/190 (67.89%), Query Frame = 3 Query: 228 NPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGG-CITIQFVTNVIIHGLHVHDCKPT--GNAMVRSS----PTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAI 776 NPID CWR D NW +NR +LADC +GFG + +GG+ G Y VT +D+PVNP PGTLR+ ++K LWI+F ++M I+L+ L V +KTIDGRGA VH+ NGG C+ ++ ++VI+HGLH+H C + G+ +V S P H DGDAI++ ++ WIDHNSLS C+DGL+D +GST I Sbjct: 2 NPIDSCWRGDSNWDQNRMKLADCVVGFGSSTMGGKGGEIYTVTSS-EDNPVNPTPGTLRYGATREKALWIIFSQNMNIKLQMPLYVAGYKTIDGRGAVVHLGNGGPCLFMRKASHVILHGLHIHGCNTSVLGDVLVSESIGVEPVH-----AQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGI 185
BLAST of CB293839 vs. ExPASy Swiss-Prot
Match: MPA14_AMBAR (Pollen allergen Amb a 1.4 OS=Ambrosia artemisiifolia PE=1 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.575e-48 Identity = 103/210 (49.05%), Postives = 127/210 (60.48%), Query Frame = 3 Query: 141 PDEIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGST 770 P A ++ ++ E R L +CGT N ID CWR +W +NRK LADC GF + IGG+DG Y VT DDD NPK GTLR Q++PLWI+F RDMVI+L +EL +N+ KTIDGRGA V I N G I V N+IIH + +HD +++S R +DGDAI I G S IWIDH SLS DGL+DA GST Sbjct: 22 PVRSAEDLQQILPSANETRSLT--TCGTYNIIDGCWRGKADWAENRKALADCAQGFAKGTIGGKDGDIYTVTSELDDDVANPKEGTLRFGAAQNRPLWIIFARDMVIRLDRELAINNDKTIDGRGAKVEIINAG-FAIYNVKNIIIHNIIMHDIVVNPGGLIKSHDGPPVPRKGSDGDAIGISGGSQIWIDHCSLSKAVDGLIDAKHGST 228
BLAST of CB293839 vs. ExPASy Swiss-Prot
Match: MPAA2_AMBAR (Pollen allergen Amb a 2 OS=Ambrosia artemisiifolia PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.509e-48 Identity = 99/199 (49.75%), Postives = 126/199 (63.32%), Query Frame = 3 Query: 180 NSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIIHGLHVHDCKPTGNAMVRSSPTHYGWRTVADGDAISIFGSSHIWIDHNSLSHCADGLVDAVMGSTAI 776 N T R G C N ID CWRC +W +NR+ L +C GFG+ GG+ G Y+VT +DDD VNPK GTLR QD+PLWI+F+RDM+I L+QE++V S KTIDGRGA V + GG IT+ V NVIIH + +HD + ++S+ R +DGDAI + GSS IWIDH +LS DGLVD GST + Sbjct: 36 NDTRRSLQG---CEAHNIIDKCWRCKPDWAENRQALGNCAQGFGKATHGGKWGDIYMVTSDQDDDVVNPKEGTLRFGATQDRPLWIIFQRDMIIYLQQEMVVTSDKTIDGRGAKVELVYGG-ITLMNVKNVIIHNIDIHDVRVLPGGRIKSNGGPAIPRHQSDGDAIHVTGSSDIWIDHCTLSKSFDGLVDVNWGSTGV 230 The following BLAST results are available for this feature:
BLAST of CB293839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB293839 ID=CB293839; Name=CB293839; organism=Citrus sinensis; type=EST; length=776bpback to top |