CB293848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_LISMO (2-succinylbenzoate--CoA ligase OS=Listeria monocytogenes GN=menE PE=3 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 1.238e-26 Identity = 60/151 (39.74%), Postives = 92/151 (60.93%), Query Frame = -2 Query: 296 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELRE 748 GEI+ +G S+ GYL + T D GWF TGD+G + +G+L + +R D+IISGGEN+ E+E V+ AV E AV+ +PD+ WG P AF+ + + E E+ C+ L Y +PK ++ E+LPKT++GKI++ +L+E Sbjct: 318 GEILLKGPSITPGYLHNKKATEASFVD-GWFKTGDIGYLDEEGFLFVVERRSDLIISGGENIYPTEIEHVIGEYVAVKEVAVIGQPDDKWGSVPVAFIVAEETFD----EDELQLICQTNLASYKIPKQIIIVEKLPKTASGKIQRNKLKE 463
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_BACLD (2-succinylbenzoate--CoA ligase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=menE PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.617e-26 Identity = 62/149 (41.61%), Postives = 92/149 (61.74%), Query Frame = -2 Query: 302 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFEL 748 GEI +G ++M GYLK+ K +DGWF TGD+G DG+L + DR D+IISGGEN+ EVE+VL ++P V EA V D+ WG+ P A+L + ++ E+E+ E+C+ RL Y VPK F + LP+ ++ K+ + +L Sbjct: 335 GEITVKGPTVMKGYLKN-EAANKDSFNDGWFKTGDIGYFDDDGFLYVLDRRSDLIISGGENIYPAEVEAVLLSHPNVAEAGVKGVDDKTWGKVPHAYLVADSPVD----EEELSEFCKERLASYKVPKAFHFVDRLPRNASNKLMRHKL 478
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ALKK_PSEOL (Medium-chain-fatty-acid--CoA ligase OS=Pseudomonas oleovorans GN=alkK PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.112e-26 Identity = 74/191 (38.74%), Postives = 108/191 (56.54%), Query Frame = -2 Query: 296 ERARMKSRQGVRTVCFPEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYL-KDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETP--CAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELRE 859 E+ ++ QG R E+ +++ E G+ + DG S G ++ RG ++ Y DP T DGWF TGDV I +DG++ I DR+KD+I SGGE +S+VE+ES+ +P + +AAV+A E W E P A S +EL T E+ Y ++ R+ +P +F EELP+ TGKI K LRE Sbjct: 351 EKLSLRKSQG-RPPYGVELKIVNDE-GIRLPEDGRSKGNLMARGHWVIKDYFHSDPGSTLS----DGWFSTGDVATIDSDGFMTICDRAKDIIKSGGEWISTVELESIAIAHPHIVDAAVIAARHEKWDERPLLIAVKSPNSEL----TSGEVCNYFADKVARWQIPDAAIFVEELPRNGTGKILKNRLRE 531
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ACSF2_PONAB (Acyl-CoA synthetase family member 2, mitochondrial OS=Pongo abelii GN=ACSF2 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.112e-26 Identity = 60/151 (39.74%), Postives = 91/151 (60.26%), Query Frame = -2 Query: 296 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELRE 748 GE+ RG +MLGY +P T + + D W+ TGDV ++ G+ +I RSKD+II GGEN+ E+E +T+P V E VV D+ GE CA + LK ++ T +EI +C+ ++ + +P+ +VF P T +GKI+KF+LRE Sbjct: 459 GELCIRGYCVMLGYWGEPQKTEEAVDQDKWYRTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEICACIRLKD--GEETTVEEIKAFCKGKISHFKIPRYIVFVTNYPLTISGKIQKFKLRE 607
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ACSF2_MACFA (Acyl-CoA synthetase family member 2, mitochondrial OS=Macaca fascicularis GN=ACSF2 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.112e-26 Identity = 63/188 (33.51%), Postives = 107/188 (56.91%), Query Frame = -2 Query: 296 ERARMKSRQGVRTVCFPEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELRE 859 + K+ R + E +++ E+G+ + + GE+ RG +MLGY +P T + + D W+ TGD+ ++ G+ +I RSKD+II GGEN+ E+E +T+P V E VV D+ GE CA + LK ++ T +E+ +C+ ++ + +P+ +VF P T++GKI+KF+LRE Sbjct: 427 DTVEQKAESVGRIMPHTEARIMNMEAGMLAELN--TPGELCIRGYCVMLGYWGEPQKTGEAVDQDKWYRTGDIATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEICACIRLKD--GEETTAEEMKAFCKGKISHFKIPRYIVFVTNYPLTTSGKIQKFKLRE 610
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: LCFA_BACSU (Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis GN=lcfA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.759e-26 Identity = 64/151 (42.38%), Postives = 89/151 (58.94%), Query Frame = -2 Query: 296 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELRE 748 GEI+ +G +M GY P T ++D GW +TGD+G + +G+ I DR KD+II+GG N+ EVE LY + A+ E V PD + GET AF+ LK K +E+ + R+RL Y VPK F++ELPKT+ GKI + L E Sbjct: 404 GEIIVKGPQVMKGYWNKPEETAAVLRD-GWLFTGDMGYMDEEGFFYIADRKKDIIIAGGYNIYPREVEEALYEHEAIQEIVVAGVPDSYRGETVKAFVVLKK--GAKADTEELDAFARSRLAPYKVPKAYEFRKELPKTAVGKILRRRLLE 551
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_LISMF (2-succinylbenzoate--CoA ligase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=menE PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 6.146e-26 Identity = 59/151 (39.07%), Postives = 89/151 (58.94%), Query Frame = -2 Query: 296 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELRE 748 GEI+ +G S+ GYL + T D GWF TGD+G + +G+L + +R D+IISGGEN+ E+E V+ V E AV+ +PD+ WG P AF+ + + E E+ C L Y +PK + E+LPKT++GKI++ +L+E Sbjct: 318 GEILLKGPSITPGYLHNKKATEASFVD-GWFKTGDIGYLDEEGFLFVLERRSDLIISGGENIYPTEIEHVISEYEGVKEVAVIGKPDDKWGSVPVAFIVAEETFD----EAELRLICETNLAGYKIPKQITIVEKLPKTASGKIQRNKLKE 463
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: LCFA_ECO57 (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O157:H7 GN=fadD PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.048e-25 Identity = 63/160 (39.38%), Postives = 96/160 (60.00%), Query Frame = -2 Query: 269 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGKSK 748 GE+ RG +MLGY + P+ T + +K+ GW +TGD+ V+ +G+L I DR KD+I+ G N+ E+E V+ +P V E A V P GE F+ K + TE+ ++ +CR +L Y VPK V F++ELPK++ GKI + ELR+ A+ +K Sbjct: 405 GELCVRGPQVMLGYWQRPDATDEIIKN-GWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKK---DPSLTEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKVDNK 560
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ACSF2_RAT (Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus GN=Acsf2 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.369e-25 Identity = 60/151 (39.74%), Postives = 90/151 (59.60%), Query Frame = -2 Query: 296 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELRE 748 GE+ RG +M GY +P T + + D W+ TGD+ + G+ I RSKD+II GGEN+ E+E + +P V EA VV D+ GE CA + LK+ + TE+EI +C+ ++ + +P+ +VF E P T +GKI+KF+LRE Sbjct: 459 GELCIRGYCVMQGYWGEPQKTFETVGQDRWYRTGDIASMDEQGFCRIVGRSKDMIIRGGENIYPAELEDFFHKHPQVQEAQVVGVKDDRMGEEICACIRLKS--GETTTEEEIKAFCKGKISHFKIPRYIVFVEGYPLTVSGKIQKFKLRE 607
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: LCFA_ECOLI (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli (strain K12) GN=fadD PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.335e-25 Identity = 62/160 (38.75%), Postives = 96/160 (60.00%), Query Frame = -2 Query: 269 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGKSK 748 GE+ +G +MLGY + P+ T + +K+ GW +TGD+ V+ +G+L I DR KD+I+ G N+ E+E V+ +P V E A V P GE F+ K + TE+ ++ +CR +L Y VPK V F++ELPK++ GKI + ELR+ A+ +K Sbjct: 405 GELCVKGPQVMLGYWQRPDATDEIIKN-GWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKK---DPSLTEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKVDNK 560 The following BLAST results are available for this feature:
BLAST of CB293848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 334
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293848 ID=CB293848; Name=CB293848; organism=Citrus sinensis; type=EST; length=887bpback to top |