CB293848

Overview
NameCB293848
Unique NameCB293848
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ACSA_XANCP (Acetyl-coenzyme A synthetase OS=Xanthomonas campestris pv. campestris GN=acsA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.616e-12
Identity = 46/127 (36.22%), Postives = 69/127 (54.33%), Query Frame = -2
Query:  287 GWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKA-ELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAK 664
            G ++TGD     ADGY  I  R  DVI   G  + + EVES L ++P V EAAVV  P +  G+   A+++L A E   +   KE++ + R  +     P  + +   LPKT +GKI +  LR++A+
Sbjct:  493 GSYFTGDGCRRDADGYYWITGRVDDVINVSGHRIGTAEVESALVSHPKVAEAAVVGFPHDVKGQGIYAYVTLIAGETPSEELHKELVSWVRKEIGPIASPDHLQWAPGLPKTRSGKIMRRILRKIAE 619          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ACSA_XANC8 (Acetyl-coenzyme A synthetase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=acsA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.616e-12
Identity = 46/127 (36.22%), Postives = 69/127 (54.33%), Query Frame = -2
Query:  287 GWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKA-ELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAK 664
            G ++TGD     ADGY  I  R  DVI   G  + + EVES L ++P V EAAVV  P +  G+   A+++L A E   +   KE++ + R  +     P  + +   LPKT +GKI +  LR++A+
Sbjct:  493 GSYFTGDGCRRDADGYYWITGRVDDVINVSGHRIGTAEVESALVSHPKVAEAAVVGFPHDVKGQGIYAYVTLIAGETPSEELHKELVSWVRKEIGPIASPDHLQWAPGLPKTRSGKIMRRILRKIAE 619          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ACSA_VIBVY (Acetyl-coenzyme A synthetase OS=Vibrio vulnificus (strain YJ016) GN=acsA PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.616e-12
Identity = 41/126 (32.54%), Postives = 66/126 (52.38%), Query Frame = -2
Query:  290 GWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKA-ELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMA 664
            G ++TGD      DGY  I  R  DV+   G  + + E+ES L  +P + EAA+V  P +  G+   A+++L A E       KE+ ++ R  +     P  + + + LPKT +GKI +  LR++A
Sbjct:  495 GMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEIESALVAHPKIAEAAIVGIPHDIKGQAIYAYVTLNAGEYPTAELHKEVKDWVRKEIGPIATPDVLHWTDALPKTRSGKIMRRILRKIA 620          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ACSA_VIBVU (Acetyl-coenzyme A synthetase OS=Vibrio vulnificus GN=acsA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.616e-12
Identity = 41/126 (32.54%), Postives = 66/126 (52.38%), Query Frame = -2
Query:  290 GWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKA-ELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMA 664
            G ++TGD      DGY  I  R  DV+   G  + + E+ES L  +P + EAA+V  P +  G+   A+++L A E       KE+ ++ R  +     P  + + + LPKT +GKI +  LR++A
Sbjct:  495 GMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEIESALVAHPKIAEAAIVGIPHDIKGQAIYAYVTLNAGEYPTAELHKEVKDWVRKEIGPIATPDVLHWTDALPKTRSGKIMRRILRKIA 620          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ACSA_STRAW (Acetyl-coenzyme A synthetase OS=Streptomyces avermitilis GN=acsA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.616e-12
Identity = 45/129 (34.88%), Postives = 70/129 (54.26%), Query Frame = -2
Query:  287 DGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLK--AELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAK 667
            +G ++ GD      DG + +  R  DV++  G N+S+ EVES L ++P+V EAAVV   DE  G+   AF+ L+  A  E      ++  +    L     PK ++   ELPKT +GKI +  LR++A+
Sbjct:  494 EGKYFAGDGAKKDEDGDIWLLGRVDDVMLVSGHNISTTEVESALVSHPSVAEAAVVGAADETTGQAIVAFVILRGTANAEDDNLVADLRNHVGTTLGPIAKPKRILPVAELPKTRSGKIMRRLLRDVAE 622          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ACSA_PARL1 (Acetyl-coenzyme A synthetase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=acsA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.616e-12
Identity = 45/127 (35.43%), Postives = 67/127 (52.76%), Query Frame = -2
Query:  287 GWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKA-ELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAK 664
            G ++TGD      DGY  I  R  DV+   G  + + EVES L  +P V EAAVV  P +  G+   A+++L A E   +   KE++ + R  +     P  + F   LPKT +GKI +  LR++A+
Sbjct:  491 GRYFTGDGCRRDEDGYYWITGRVDDVLNVSGHRMGTAEVESALVAHPKVAEAAVVGYPHDIKGQGIYAYVTLIAGEAATEELRKELVTWVRKEIGPIASPDLIQFAPGLPKTRSGKIMRRILRKIAE 617          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ANGR_VIBAN (Protein angR OS=Vibrio anguillarum GN=angR PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.125e-11
Identity = 53/169 (31.36%), Postives = 79/169 (46.75%), Query Frame = -2
Query:  263 GEIVFRGGSMMLGYLKDPNGTR-KCMKDDG--WFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFL---SLKAELEKKPTEKEIIE-YCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGKSKVS 748
            GE+   G  + LGY  D   T+ + +  DG  W+ TGD+G    DG LE   R    +  GG  +   E+E  L   P V  A  +A  ++   +T  AF+   S +A +   P + E ++     +LP YMVPK ++F E  P T+ GK+    L  M     K+  S
Sbjct:  795 GELWIGGDGIALGYFDDELKTQAQFLHIDGHAWYRTGDMGCYWPDGTLEFLGRRDKQVKVGGYRIELGEIEVALNNIPGVQRAVAIAVGNK--DKTLAAFIVMDSEQAPIVTAPLDAEEVQLLLNKQLPNYMVPKRIIFLETFPLTANGKVDHKALTRMTNREKKTSQS 961          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ACSA_RHILW (Acetyl-coenzyme A synthetase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=acsA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.125e-11
Identity = 45/127 (35.43%), Postives = 69/127 (54.33%), Query Frame = -2
Query:  287 GWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPT-EKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAK 664
            G ++TGD     ADGY  I  R  DV+   G  L + EVES L ++  V+EAAVV  P    G+    +++L A  E   T  ++++++ RA +     P  + F   LPKT +GKI +  LR++A+
Sbjct:  494 GKYFTGDGCRRDADGYYWITGRVDDVLNVSGHRLGTAEVESALVSHNLVSEAAVVGYPHPIKGQGIYCYVTLMAGHEGTDTLRQDLVKHVRAEIGPIAAPDKIQFAPGLPKTRSGKIMRRILRKIAE 620          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ACSA_NEUCR (Acetyl-coenzyme A synthetase OS=Neurospora crassa GN=acu-5 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.125e-11
Identity = 40/125 (32.00%), Postives = 67/125 (53.60%), Query Frame = -2
Query:  293 GWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELE-KKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREM 664
            G+++TGD      +G+  I+ R  DV+   G  LS+ E+E+ L  + ++ EAAVV   DE  G+   AF+++K   +      KE +   R  +  +  PK +    +LPKT +GKI +  LR++
Sbjct:  511 GYYFTGDGAARDHEGFYWIRGRVDDVVNVSGHRLSTAEIEAALIEHHSIAEAAVVGVADELTGQAVNAFVAVKEGTQINDALRKEFVLQVRRSIGPFAAPKAIYIVPDLPKTRSGKIMRRILRKI 635          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ACSA_LEPBL (Acetyl-coenzyme A synthetase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=acsA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.125e-11
Identity = 44/126 (34.92%), Postives = 67/126 (53.17%), Query Frame = -2
Query:  290 GWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPT-EKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMA 664
            G+++TGD      DGY  I  R  DVI   G  + S EVES L  N +V EAAVV  P +  G+   A++++K  +    T +KE++      + +   P  + +   LPKT +GKI +  LR++A
Sbjct:  498 GYYFTGDGARRDKDGYYWITGRVDDVINVSGHRIGSAEVESALVENRSVAEAAVVGFPHDIKGQGIYAYVTVKEGIATNDTLKKELVAIVEKVIGKIARPDVIHWAPSLPKTRSGKIMRRILRKIA 623          
The following BLAST results are available for this feature:
BLAST of CB293848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 334
Match NameE-valueIdentityDescription
ACSA_XANCP8.616e-1236.22Acetyl-coenzyme A synthetase OS=Xanthomonas campes... [more]
ACSA_XANC88.616e-1236.22Acetyl-coenzyme A synthetase OS=Xanthomonas campes... [more]
ACSA_VIBVY8.616e-1232.54Acetyl-coenzyme A synthetase OS=Vibrio vulnificus ... [more]
ACSA_VIBVU8.616e-1232.54Acetyl-coenzyme A synthetase OS=Vibrio vulnificus ... [more]
ACSA_STRAW8.616e-1234.88Acetyl-coenzyme A synthetase OS=Streptomyces averm... [more]
ACSA_PARL18.616e-1235.43Acetyl-coenzyme A synthetase OS=Parvibaculum lavam... [more]
ANGR_VIBAN1.125e-1131.36Protein angR OS=Vibrio anguillarum GN=angR PE=2 SV... [more]
ACSA_RHILW1.125e-1135.43Acetyl-coenzyme A synthetase OS=Rhizobium legumino... [more]
ACSA_NEUCR1.125e-1132.00Acetyl-coenzyme A synthetase OS=Neurospora crassa ... [more]
ACSA_LEPBL1.125e-1134.92Acetyl-coenzyme A synthetase OS=Leptospira borgpet... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06dc03_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06dc03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293848 ID=CB293848; Name=CB293848; organism=Citrus sinensis; type=EST; length=887bp
TTTTTTTTTTTTTTTTTAATATAAATTTTTTGTACTATTTAACTTAAATT
CAATGGTCTACACATTACTAATGCAGTAAAAAGACAAAAAAAATTACAGC
CCCATGAAAGAGGAACCTATGCTCCAAGTTGTGTAAGTGAAAAACAAGAA
TGGGACATAACAAATCATATGCGCAAATCAAACTTCATACCAAACATACC
GACACATGACGTAGGCCCAAATTATTATCACATCCCGAGTCAAATCGGTA
GCTCTACATCCGACTCACTTTCGATTTGCCCATCGCCTTCGCCATCTCTC
TTAATTCAAACTTCTTAATCTTCCCCGTCGAAGTCTTCGGCAACTCCTCC
TTGAACACCACCGTTTTAGGCACCATGTAACGCGGCAACCTCGCTCTACA
GTACTCAATAATCTCCTTCTCAGTTGGTTTCTTTTCCAATTCAGCCTTCA
AGCTCAAAAACGCACACGGGGTCTCCCCCCAAAACTCATCAGGCCGAGCC
ACGACAGCCGCCTCGTTAACGGCCGGATTCGTGTACAGCACCGATTCAAC
CTCCACGCTGCTCAAATTCTCTCCCCCGCTTATTATCACATCCTTTGATC
GATCTTTAATCTCTAAATAACCGTCCGCGTGAATCACGCCAACGTCTCCC
GTGTAAAACCAACCATCATCCTTCATGCACTTGCGGGTCCCGTTAGGGTC
TTTGAGATAACCAAGCATCATGCTTCCGCCTCTGAACACGATTTCACCGA
GCGATGCCCCGTCGTGACTCACACTGAGTCCTGACTCGGAATCTATAACG
TCTATTTCGGGGAAGCAAACCGTCCTCACTCCTTGTCTCGATTTCATCCT
CGCCCTCTCCGTCGCCGGGAACCTATTCCACTTATTT
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