CB293848

Overview
NameCB293848
Unique NameCB293848
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ACSA_ALHEH (Acetyl-coenzyme A synthetase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=acsA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.585e-11
Identity = 44/126 (34.92%), Postives = 66/126 (52.38%), Query Frame = -2
Query:  290 GWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELE-KKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMA 664
            G ++TGD      DGY  I  R  DVI   G  + + EVES L  + AV EAAVV  P +  G+   A+++L A +E     +KE+++     +     P  + +   LPKT +GKI +  LR++A
Sbjct:  491 GMYFTGDGARRDEDGYYWITGRVDDVINVSGHRMGTAEVESALVLHDAVAEAAVVGYPHDIKGQGIYAYVTLMAGVEPSDELKKELVKLVSNEIGPIAKPDVIQWAPGLPKTRSGKIMRRILRKVA 616          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ACBG1_MACFA (Long-chain-fatty-acid--CoA ligase ACSBG1 OS=Macaca fascicularis GN=ACSBG1 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.585e-11
Identity = 45/150 (30.00%), Postives = 79/150 (52.67%), Query Frame = -2
Query:  344 VSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVII-SGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELE---KKPTE---KEIIEYCRARLPRYMVPKTVVFKEE 772
            V+ D   +GEI   G ++ +GYL   + T + + ++GW +TGD G + ADG+L I  R K++II +GGEN+  V +E  +     +   A++   D+   +     L+LK  L+     PT+   ++ +E+C+    R      +V K+E
Sbjct:  508 VNQDTEGIGEICLWGRTIFMGYLNMEDKTCEAIDEEGWLHTGDAGRLDADGFLYITGRLKELIITAGGENVPPVPIEEAVKMELPIISNAMLIGTDQ--RKFLSMLLTLKCTLDPDTSDPTDNLTEQAVEFCQRVGSRATTVSEIVGKDE 655          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: BACC_BACLI (Bacitracin synthase 3 OS=Bacillus licheniformis GN=bacC PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.294e-11
Identity = 45/163 (27.61%), Postives = 77/163 (47.24%), Query Frame = -2
Query:  278 GEIVFRGGSMMLGYLKDPNGTRK------CMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMG 748
            GE+   G  +  GYL  P  T +       +  +  + TGD+  +  DG++E   R    +   G  +   E+E  L  +  + EAAV A+ D+   +  CA++  + ++    T+K+I  +    LP YMVP  ++  +ELP T  GK+    L E  ++ G
Sbjct: 5882 GELYISGDGVAKGYLNKPELTSEKFLPNPFLPGERMYRTGDLAKMRPDGHIEYLGRIDHQVKIRGYRIELGEIEHQLLRHSDIKEAAVAAKTDQNNDQVLCAYVVSERDI----TQKDIKTFLAKELPEYMVPSYLLKLDELPLTPNGKVDLKALPEPDRSAG 6040          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ACSA_SHESR (Acetyl-coenzyme A synthetase OS=Shewanella sp. (strain MR-7) GN=acsA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.294e-11
Identity = 43/126 (34.13%), Postives = 66/126 (52.38%), Query Frame = -2
Query:  290 GWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSL-KAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMA 664
            G ++TGD      DGY  I  R  DVI   G  L + EVES L ++  V EAAVV  P +  G+   A+++L +   E +   +E+ ++ R  +     P  + +   LPKT +GKI +  LR++A
Sbjct:  494 GMYFTGDGARRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVSHELVAEAAVVGYPHDIKGQGIYAYVTLTRGTEESEELRQELRQWVRKEIGALATPDLIQWATGLPKTRSGKIMRRFLRKIA 619          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ACSA_SHESM (Acetyl-coenzyme A synthetase OS=Shewanella sp. (strain MR-4) GN=acsA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.294e-11
Identity = 43/126 (34.13%), Postives = 66/126 (52.38%), Query Frame = -2
Query:  290 GWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSL-KAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMA 664
            G ++TGD      DGY  I  R  DVI   G  L + EVES L ++  V EAAVV  P +  G+   A+++L +   E +   +E+ ++ R  +     P  + +   LPKT +GKI +  LR++A
Sbjct:  494 GMYFTGDGARRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVSHELVAEAAVVGYPHDIKGQGIYAYVTLTRGTEESEELRQELRQWVRKEIGALATPDLIQWATGLPKTRSGKIMRRFLRKIA 619          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ACSA_SHESA (Acetyl-coenzyme A synthetase OS=Shewanella sp. (strain ANA-3) GN=acsA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.294e-11
Identity = 43/126 (34.13%), Postives = 66/126 (52.38%), Query Frame = -2
Query:  290 GWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSL-KAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMA 664
            G ++TGD      DGY  I  R  DVI   G  L + EVES L ++  V EAAVV  P +  G+   A+++L +   E +   +E+ ++ R  +     P  + +   LPKT +GKI +  LR++A
Sbjct:  494 GMYFTGDGARRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVSHELVAEAAVVGYPHDIKGQGIYAYVTLTRGTEESEELRQELRQWVRKEIGALATPDLIQWATGLPKTRSGKIMRRFLRKIA 619          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ACSA_SHEON (Acetyl-coenzyme A synthetase OS=Shewanella oneidensis GN=acsA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.294e-11
Identity = 43/126 (34.13%), Postives = 66/126 (52.38%), Query Frame = -2
Query:  290 GWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSL-KAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMA 664
            G ++TGD      DGY  I  R  DVI   G  L + EVES L ++  V EAAVV  P +  G+   A+++L +   E +   +E+ ++ R  +     P  + +   LPKT +GKI +  LR++A
Sbjct:  494 GMYFTGDGARRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVSHELVAEAAVVGYPHDIKGQGIYAYVTLTRGTEESEELRQELRQWVRKEIGALATPDLIQWATGLPKTRSGKIMRRFLRKIA 619          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ACSA_PSYCK (Acetyl-coenzyme A synthetase OS=Psychrobacter cryohalolentis (strain K5) GN=acsA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.294e-11
Identity = 54/176 (30.68%), Postives = 84/176 (47.73%), Query Frame = -2
Query:  290 DVIDSESGLSVSHDGASLGEIVFRG---GSMMLGYLKDPNG-TRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLK-AELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMA 802
            +VID++    V+ +GA+ G +V      G M   Y       T    +  G+++TGD      DG+  I  R  DV+   G  L + E+ES +  +PA  EAAVV  P +  G   CAF+ LK +E   +  + E+  + R+ +        +     LPKT +GKI +  LR +A
Sbjct:  449 EVIDTDG---VALEGAAEGNLVINSSWPGQMRTIYQDHARFLTTYFTEYPGYYFTGDGVQRDEDGHYWITGRVDDVLNVSGHRLGTAEIESSIVAHPATAEAAVVGMPHDIRGMGICAFVILKSSETATESLKSELNRHVRSEIGPIANLDAIYMVNVLPKTRSGKIMRRILRSLA 621          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ACSA_METSB (Acetyl-coenzyme A synthetase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=acsA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.294e-11
Identity = 46/127 (36.22%), Postives = 66/127 (51.97%), Query Frame = -2
Query:  287 GWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELE-KKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAK 664
            G ++TGD      DGY  I  R  DVI   G  L + EVES L  +  V EAAVV  P +  G+   A+++L   +E  +   KE++ + R  +     P  V F   LPKT +GKI +  LR++A+
Sbjct:  492 GKYFTGDGCRRDEDGYYWITGRVDDVINVSGHRLGTAEVESSLVAHIKVAEAAVVGYPHDLKGQGIYAYVTLMTGIEPSEELRKELVSWVRKDIGPIASPDIVHFAPGLPKTRSGKIMRRILRKIAE 618          
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ACSA_SHEB9 (Acetyl-coenzyme A synthetase OS=Shewanella baltica (strain OS195) GN=acsA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.526e-11
Identity = 43/126 (34.13%), Postives = 66/126 (52.38%), Query Frame = -2
Query:  290 GWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSL-KAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMA 664
            G ++TGD      DGY  I  R  DVI   G  L + EVES L ++  V EAAVV  P +  G+   A+++L +   E +   +E+ ++ R  +     P  + +   LPKT +GKI +  LR++A
Sbjct:  494 GMYFTGDGARRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVSHELVAEAAVVGYPHDIKGQGIYAYVTLTRGTEETEELRQELRQWVRKEIGALATPDLIQWATGLPKTRSGKIMRRFLRKIA 619          
The following BLAST results are available for this feature:
BLAST of CB293848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 334
Match NameE-valueIdentityDescription
ACSA_ALHEH5.585e-1134.92Acetyl-coenzyme A synthetase OS=Alkalilimnicola eh... [more]
ACBG1_MACFA5.585e-1130.00Long-chain-fatty-acid--CoA ligase ACSBG1 OS=Macaca... [more]
BACC_BACLI7.294e-1127.61Bacitracin synthase 3 OS=Bacillus licheniformis GN... [more]
ACSA_SHESR7.294e-1134.13Acetyl-coenzyme A synthetase OS=Shewanella sp. (st... [more]
ACSA_SHESM7.294e-1134.13Acetyl-coenzyme A synthetase OS=Shewanella sp. (st... [more]
ACSA_SHESA7.294e-1134.13Acetyl-coenzyme A synthetase OS=Shewanella sp. (st... [more]
ACSA_SHEON7.294e-1134.13Acetyl-coenzyme A synthetase OS=Shewanella oneiden... [more]
ACSA_PSYCK7.294e-1130.68Acetyl-coenzyme A synthetase OS=Psychrobacter cryo... [more]
ACSA_METSB7.294e-1136.22Acetyl-coenzyme A synthetase OS=Methylocella silve... [more]
ACSA_SHEB99.526e-1134.13Acetyl-coenzyme A synthetase OS=Shewanella baltica... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06dc03_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06dc03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293848 ID=CB293848; Name=CB293848; organism=Citrus sinensis; type=EST; length=887bp
TTTTTTTTTTTTTTTTTAATATAAATTTTTTGTACTATTTAACTTAAATT
CAATGGTCTACACATTACTAATGCAGTAAAAAGACAAAAAAAATTACAGC
CCCATGAAAGAGGAACCTATGCTCCAAGTTGTGTAAGTGAAAAACAAGAA
TGGGACATAACAAATCATATGCGCAAATCAAACTTCATACCAAACATACC
GACACATGACGTAGGCCCAAATTATTATCACATCCCGAGTCAAATCGGTA
GCTCTACATCCGACTCACTTTCGATTTGCCCATCGCCTTCGCCATCTCTC
TTAATTCAAACTTCTTAATCTTCCCCGTCGAAGTCTTCGGCAACTCCTCC
TTGAACACCACCGTTTTAGGCACCATGTAACGCGGCAACCTCGCTCTACA
GTACTCAATAATCTCCTTCTCAGTTGGTTTCTTTTCCAATTCAGCCTTCA
AGCTCAAAAACGCACACGGGGTCTCCCCCCAAAACTCATCAGGCCGAGCC
ACGACAGCCGCCTCGTTAACGGCCGGATTCGTGTACAGCACCGATTCAAC
CTCCACGCTGCTCAAATTCTCTCCCCCGCTTATTATCACATCCTTTGATC
GATCTTTAATCTCTAAATAACCGTCCGCGTGAATCACGCCAACGTCTCCC
GTGTAAAACCAACCATCATCCTTCATGCACTTGCGGGTCCCGTTAGGGTC
TTTGAGATAACCAAGCATCATGCTTCCGCCTCTGAACACGATTTCACCGA
GCGATGCCCCGTCGTGACTCACACTGAGTCCTGACTCGGAATCTATAACG
TCTATTTCGGGGAAGCAAACCGTCCTCACTCCTTGTCTCGATTTCATCCT
CGCCCTCTCCGTCGCCGGGAACCTATTCCACTTATTT
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