CB293848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: 4CL3_ORYSJ (Probable 4-coumarate--CoA ligase 3 OS=Oryza sativa subsp. japonica GN=4CL3 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.752e-24 Identity = 65/189 (34.39%), Postives = 106/189 (56.08%), Query Frame = -2 Query: 299 ATERARMKSRQGVRTVCFPEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELR 865 A E ++KS V E+ ++D ++G S+ + + GEI RG +M GYL DP T+ + +DGW +TGD+G + D + I DR K++I G + E+E++L T+P + +AAVV+ D+ GE P AF+ ++ E + TE EI ++ + Y V F + +PK +GKI + +LR Sbjct: 348 AKEPFKVKSGSCGTVVRNAELKIVDPDTGTSLGRNQS--GEICIRGEQIMKGYLNDPEATKNTIDEDGWLHTGDIGFVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEVPVAFI-VRTE-GSEITEDEIKKFVAKEVVFYKRINKVFFTDSIPKNPSGKILRKDLR 532
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_BACA2 (2-succinylbenzoate--CoA ligase OS=Bacillus amyloliquefaciens (strain FZB42) GN=menE PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.281e-23 Identity = 57/154 (37.01%), Postives = 88/154 (57.14%), Query Frame = -2 Query: 287 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAK 748 GEI +G ++M GY + + + GWF TGD+G + +G+L + DR D+IISGGEN+ EVE+ L +PAV EA V D WG+ P AFL L + + + +E+ +CR RL +Y +P + LP+ ++ K+ + L E+ K Sbjct: 335 GEITVKGPNVMKGYYHRDDANQAAFHN-GWFKTGDLGYLDDEGFLYVLDRRSDLIISGGENIYPAEVEAALLAHPAVAEAGVSGSEDPKWGKVPHAFLVLTSSV----SSEELTAFCRERLAKYKIPAAFFEVDGLPRNASNKLMRHRLNELRK 483
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_BACSU (2-succinylbenzoate--CoA ligase OS=Bacillus subtilis GN=menE PE=3 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 2.855e-23 Identity = 56/154 (36.36%), Postives = 90/154 (58.44%), Query Frame = -2 Query: 287 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAK 748 GEI+ +G ++M Y + ++ GW TGD+G + +G+L + DR D+IISGGEN+ EVESVL ++PAV EA V D+ WG+ P A+L L K + E+ +YC+ RL +Y +P + LP+ ++ K+ + +L++ K Sbjct: 334 GEIMVKGPNVMKSYFNRESANEASFQN-GWLKTGDLGYLDNEGFLYVLDRRSDLIISGGENIYPAEVESVLLSHPAVAEAGVSGAEDKKWGKVPHAYL----VLHKPVSAGELTDYCKERLAKYKIPAKFFVLDRLPRNASNKLLRNQLKDARK 482
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_LACLA (2-succinylbenzoate--CoA ligase OS=Lactococcus lactis subsp. lactis GN=menE PE=3 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 6.360e-23 Identity = 59/156 (37.82%), Postives = 91/156 (58.33%), Query Frame = -2 Query: 299 DGASLGEIVFRGGSMMLGYL-KDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELR 763 D A +GEI + +M YL + P GT F TGD+G + DG+L + +R KD+IISGGEN+ E+E ++Y+ P + E A+VA+PD WG+ P F+S EK + + +L +Y P+++ F +ELPK ++GKI + EL+ Sbjct: 309 DLAGVGEIWLKSPMLMKAYLGQKPYGTA--------FETGDIGYLDTDGFLYLLNRRKDIIISGGENIYPKEIEDLVYSLPEIKECALVAKPDAKWGQVPILFVSGNISQEK------LENFLTEKLAKYKRPQSITFMDELPKNASGKILRKELK 450
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: 4CL_PINTA (4-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.306e-23 Identity = 62/175 (35.43%), Postives = 102/175 (58.29%), Query Frame = -2 Query: 284 EIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKA 808 +I ++D+E+G S+ H+ A GEI RG +M GY+ DP T + ++GW +TGDV I D + I DR K++I G ++ E+E++L +P++ +AAVV + E GE P AF+ +E+ +E+EI E+ ++ Y V F + +PK+ +GKI + +LR A Sbjct: 368 QIKILDTETGESLPHNQA--GEICIRGPEIMKGYINDPESTAATIDEEGWLHTGDVEYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSEI----SEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAA 536
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: 4CL_VANPL (4-coumarate--CoA ligase OS=Vanilla planifolia GN=4CL PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.085e-22 Identity = 64/170 (37.65%), Postives = 98/170 (57.65%), Query Frame = -2 Query: 299 EIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELR 808 E+ ++D E+G S+ + GEI RG +M GYL DP T + + +GW +TGD+G I D L I DR K++I G ++ E+E++L T+P +++AAVV DE GE P AF+ +K+ TE EI ++ ++ Y V F E +PK +GKI + +LR Sbjct: 377 EMKIVDPETGSSLPRNHP--GEICIRGDQIMKGYLNDPEATARTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLTHPCISDAAVVPMKDEAAGEVPVAFV-VKSN-GHNITEDEIKQFISKQVIFYKRINRVFFVEAIPKAPSGKILRKDLR 542
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: 4CL2_PETCR (4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL2 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.417e-22 Identity = 67/189 (35.45%), Postives = 103/189 (54.50%), Query Frame = -2 Query: 299 ATERARMKSRQGVRTVCFPEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELR 865 A E +KS V E+ ++D E+ S+ + GEI RG +M GYL DP TR + ++GW +TGD+G I D L I DR K++I G ++ E+E++L T+P +++AAVV DE GE P AF+ TE+EI ++ ++ Y V F + +PK+ +GKI + +LR Sbjct: 350 AKEPYEIKSGACGTVVRNAEMKIVDPETNASLPRN--QRGEICIRGDQIMKGYLNDPESTRTTIDEEGWLHTGDIGFIDDDDELFIVDRLKEIIKYKGFQVAPAELEALLLTHPTISDAAVVPMIDEKAGEVPVAFVVRTNGF--TTTEEEIKQFVSKQVVFYKRIFRVFFVDAIPKSPSGKILRKDLR 534
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: 4CL1_PETCR (4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.417e-22 Identity = 67/189 (35.45%), Postives = 103/189 (54.50%), Query Frame = -2 Query: 299 ATERARMKSRQGVRTVCFPEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELR 865 A E +KS V E+ ++D E+ S+ + GEI RG +M GYL DP TR + ++GW +TGD+G I D L I DR K++I G ++ E+E++L T+P +++AAVV DE GE P AF+ TE+EI ++ ++ Y V F + +PK+ +GKI + +LR Sbjct: 350 AKEPYEIKSGACGTVVRNAEMKIVDPETNASLPRN--QRGEICIRGDQIMKGYLNDPESTRTTIDEEGWLHTGDIGFIDDDDELFIVDRLKEIIKYKGFQVAPAELEALLLTHPTISDAAVVPMIDEKAGEVPVAFVVRTNGF--TTTEEEIKQFVSKQVVFYKRIFRVFFVDAIPKSPSGKILRKDLR 534
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: 4CL1_SOYBN (4-coumarate--CoA ligase 1 (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.417e-22 Identity = 62/170 (36.47%), Postives = 98/170 (57.65%), Query Frame = -2 Query: 299 EIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELR 808 E+ ++D E+G S+ + + GEI RG +M GYL D T + + DGW +TGD+G I D L I DR K++I G ++ E+E++L T+P +++AAVV DE GE P AF+ + + TE EI ++ ++ Y V F + +PK+ +GKI + +LR Sbjct: 118 EMKIVDPETGHSLPRNQS--GEICIRGDQIMKGYLNDGEATERTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLTHPKISDAAVVPMKDEAAGEVPVAFVVI-SNGYTDTTEDEIKQFISKQVVFYKRINRVFFIDAIPKSPSGKILRKDLR 284
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: 4CL1_TOBAC (4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.156e-22 Identity = 61/170 (35.88%), Postives = 96/170 (56.47%), Query Frame = -2 Query: 299 EIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELR 808 E+ ++D ++G S+ + GEI RG +M GYL DP T + + +GW +TGD+G I D L I DR K++I G ++ E+E++L +P +++AAVV DE GE P AF + TE E+ ++ ++ Y K V F E +PK+ +GKI + +LR Sbjct: 373 EMKIVDPDTGCSLPRNQP--GEICIRGDQIMKGYLNDPEATTRTIDKEGWLHTGDIGFIDEDDELFIVDRLKELIKYKGFQVAPAEIEALLLNHPNISDAAVVPMKDEQAGEVPVAF--VVRSNGSAITEDEVKDFISKQVIFYKRVKRVFFVETVPKSPSGKILRKDLR 538 The following BLAST results are available for this feature:
BLAST of CB293848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 334
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293848 ID=CB293848; Name=CB293848; organism=Citrus sinensis; type=EST; length=887bpback to top |