CB293848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: 4CL2_TOBAC (4-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=4CL2 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.122e-22 Identity = 66/189 (34.92%), Postives = 103/189 (54.50%), Query Frame = -2 Query: 299 ATERARMKSRQGVRTVCFPEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELR 865 A E +KS V E+ ++D ++G S+ + + GEI RG +M GYL DP T + + +GW YTGD+G I D L I DR K++I G ++ E+E++L +P +++AAVV DE GE P AF + TE E+ ++ ++ Y K V F + +PK+ +GKI + +LR Sbjct: 349 AKEPFEIKSGACGTVVRNAEMKIVDPKTGNSLPRNQS--GEICIRGDQIMKGYLNDPEATARTIDKEGWLYTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLNHPNISDAAVVPMKDEQAGEVPVAF--VVRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVDAIPKSPSGKILRKDLR 533
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: 4CLL1_ARATH (4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana GN=4CLL1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.184e-22 Identity = 59/178 (33.15%), Postives = 101/178 (56.74%), Query Frame = -2 Query: 275 EIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGK 808 E+ ID ++G S+ + + GE+ R +M GY + T K + + GW +TGD+G I DG + I DR K++I G ++ E+E++L T+P+V + AVV PDE GE P A + + + +K E++I+ + A + Y + V F + +PK+ +GKI + LR+ ++ K Sbjct: 368 EVKFIDPDTGRSLPKNTS--GELCVRSQCVMQGYFMNKEETDKTIDEQGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDVAVVPLPDEEAGEIPAACVVINPKATEK--EEDILNFVAANVAHYKKVRAVHFVDSIPKSLSGKIMRRLLRDKILSINK 541
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: 4CL2_SOLTU (4-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=4CL2 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.184e-22 Identity = 61/170 (35.88%), Postives = 97/170 (57.06%), Query Frame = -2 Query: 299 EIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELR 808 E+ ++D ++G S+ + GEI RG +M GYL DP T + ++ +GW +TGD+G I D L I DR K++I G ++ E+E++L +P +++AAVV DE GE P AF + TE E+ ++ ++ Y K V F E +PK+ +GKI + +LR Sbjct: 371 EMKIVDPDTGCSLPRNQP--GEICIRGDQIMKGYLNDPEATARTIEKEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEALLINHPDISDAAVVPMIDEQAGEVPVAF--VVRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVETVPKSPSGKILRKDLR 536
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: 4CL1_SOLTU (4-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=4CL1 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.184e-22 Identity = 61/170 (35.88%), Postives = 97/170 (57.06%), Query Frame = -2 Query: 299 EIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELR 808 E+ ++D ++G S+ + GEI RG +M GYL DP T + ++ +GW +TGD+G I D L I DR K++I G ++ E+E++L +P +++AAVV DE GE P AF + TE E+ ++ ++ Y K V F E +PK+ +GKI + +LR Sbjct: 371 EMKIVDPDTGCSLPRNQP--GEICIRGDQIMKGYLNDPEATARTIEKEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEALLINHPDISDAAVVPMIDEQAGEVPVAF--VVRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVETVPKSPSGKILRKDLR 536
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_ENTFA (2-succinylbenzoate--CoA ligase OS=Enterococcus faecalis GN=menE PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.199e-21 Identity = 59/166 (35.54%), Postives = 87/166 (52.41%), Query Frame = -2 Query: 311 EIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKK 808 +I ++D L +GEI+ +G +++ GYL + DGWF TGD+G + A YL + R ++IISGGEN+ EVE VL + AAVV PD WG P A++ E+ T +I + C +L +Y PK + F P+T++GKI K Sbjct: 315 QIKIVDE---LGQEQPEKQVGEILLKGPNVVSGYLNQRQPEK--WTADGWFKTGDMGYLDAQSYLYLVSRLSELIISGGENIYPTEVEQVLQAITGIKAAAVVGEPDAQWGAVPVAYVISDQEI----TLAQIQDQCSRKLAKYKRPKRIYFCHSFPQTASGKIAK 471
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: 4CLL6_ARATH (4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana GN=4CLL6 PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 1.199e-21 Identity = 54/152 (35.53%), Postives = 89/152 (58.55%), Query Frame = -2 Query: 293 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREM 748 GE+ +G +M GYL +P T+ + +D W TGD+ DGYL I DR K++I G ++ ++E+VL ++P + +AAV A P+E GE P AF+ + E +E+++I Y +++ Y + VV +PK+ TGKI + EL+ + Sbjct: 408 GELWIQGPGVMKGYLNNPKATQMSIVEDSWLRTGDIAYFDEDGYLFIVDRIKEIIKYKGFQIAPADLEAVLVSHPLIIDAAVTAAPNEECGEIPVAFVVRRQETTL--SEEDVISYVASQVAPYRKVRKVVMVNSIPKSPTGKILRKELKRI 557
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: 4CL4_ORYSJ (Probable 4-coumarate--CoA ligase 4 OS=Oryza sativa subsp. japonica GN=4CL4 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.199e-21 Identity = 63/190 (33.16%), Postives = 101/190 (53.16%), Query Frame = -2 Query: 299 ATERARMKSRQGVRTVCFPEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKP-TEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELR 865 A E +KS V E+ ++D ++G ++ + + GEI RG +M GYL DP T+ + GW +TGD+G + D + I DR K++I G + E+E++L T+P + +AAVV DE GE P AF+ +E +E EI ++ + Y V F + +PK+ +GKI + +LR Sbjct: 358 AKEPFEVKSGSCGTVVRNAELKIVDPDTGATLGRNQS--GEICIRGEQIMKGYLNDPESTKNTIDKGGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPDIKDAAVVPMIDEIAGEVPVAFI---VRIEGSAISENEIKQFVAKEVVFYKRLNKVFFADSIPKSPSGKILRKDLR 542
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: 4CL2_ORYSJ (Probable 4-coumarate--CoA ligase 2 OS=Oryza sativa subsp. japonica GN=4CL2 PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 1.199e-21 Identity = 63/171 (36.84%), Postives = 99/171 (57.89%), Query Frame = -2 Query: 299 EIDVIDSESGLSVSHDGASL-GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELR 808 E+ V+D ++G S+ G +L GEI RG +M GYL DP T + +GW +TGD+G + D + I DR K++I G + E+ES+L +P++ +AAVV + D+ GE P AF+ A+ + TE+ I E+ ++ Y V F +PK+++GKI + ELR Sbjct: 398 ELKVVDPDTGFSL---GRNLPGEICIRGPQIMKGYLNDPEATAATIDVEGWLHTGDIGYVDDDDEVFIVDRVKELIKFKGFQVPPAELESLLIAHPSIADAAVVPQKDDVAGEVPVAFVVRAADSD--ITEESIKEFISKQVVFYKRLHKVHFIHAIPKSASGKILRRELR 563
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: 4CL2_ARATH (4-coumarate--CoA ligase 2 OS=Arabidopsis thaliana GN=4CL2 PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 1.199e-21 Identity = 62/170 (36.47%), Postives = 94/170 (55.29%), Query Frame = -2 Query: 299 EIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELR 808 E+ ++D ++G S+ + GEI RG +M GYL DP T + DGW +TGDVG I D L I DR K++I G ++ E+ES+L +P +N+ AVVA +E GE P AF + + +E EI ++ ++ Y V F + +PK +GKI + +LR Sbjct: 382 EMKILDPDTGDSLPRNKP--GEICIRGNQIMKGYLNDPLATASTIDKDGWLHTGDVGFIDDDDELFIVDRLKELIKYKGFQVAPAELESLLIGHPEINDVAVVAMKEEDAGEVPVAF--VVRSKDSNISEDEIKQFVSKQVVFYKRINKVFFTDSIPKAPSGKILRKDLR 547
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_STAAW (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain MW2) GN=menE PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.567e-21 Identity = 56/151 (37.09%), Postives = 90/151 (59.60%), Query Frame = -2 Query: 302 GEIVFRGGSMMLGYL--KDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFEL 748 GE++ +G ++M GYL D GT ++G+F TGD+ I +GY+ I DR KD+IISGGEN+ ++E+V P +++A V PD+ WG+ P + ++++ K ++I Y L +Y VPK + LP TSTGK+++ +L Sbjct: 347 GELMIKGANVMNGYLYPTDLTGTF----ENGYFNTGDIAEIDHEGYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDISK----AQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQRNKL 489 The following BLAST results are available for this feature:
BLAST of CB293848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 334
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293848 ID=CB293848; Name=CB293848; organism=Citrus sinensis; type=EST; length=887bpback to top |