CB293848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: 4CL5_ORYSJ (Probable 4-coumarate--CoA ligase 5 OS=Oryza sativa subsp. japonica GN=4CL5 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.672e-21 Identity = 65/189 (34.39%), Postives = 101/189 (53.44%), Query Frame = -2 Query: 299 ATERARMKSRQGVRTVCFPEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELR 865 A E +KS V E+ ++D ++GLS+ + GEI RG +M GYL +P T K + DGW +TGD+G + D + I DR K++I G ++ E+E++L + AV +AAVV D+ GE P AF + A T+ EI +Y ++ Y + F + +PK +GKI + +LR Sbjct: 345 AKEPTPVKSGACGTVVRNAELKIVDPDTGLSLPRNQP--GEICIRGKQIMKGYLNNPEATEKTIDKDGWLHTGDIGFVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHAAVADAAVVPMKDDSCGEIPVAF--VVARDGSGITDDEIKQYVAKQVVFYKRLHKIFFVDAIPKAPSGKILRKDLR 529
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: 4CL1_ARATH (4-coumarate--CoA ligase 1 OS=Arabidopsis thaliana GN=4CL1 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.490e-21 Identity = 59/170 (34.71%), Postives = 97/170 (57.06%), Query Frame = -2 Query: 299 EIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELR 808 E+ ++D ++G S+S + GEI RG +M GYL +P T + + DGW +TGD+G+I D L I DR K++I G ++ E+E++L +P + + AVVA +E GE P AF+ + E +E ++ ++ ++ Y V F E +PK +GKI + +LR Sbjct: 389 EMKIVDPDTGDSLSRNQP--GEICIRGHQIMKGYLNNPAATAETIDKDGWLHTGDIGLIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIGHPDITDVAVVAMKEEAAGEVPVAFVVKSKDSEL--SEDDVKQFVSKQVVFYKRINKVFFTESIPKAPSGKILRKDLR 554
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: LUCI_PHOPY (Luciferin 4-monooxygenase OS=Photinus pyralis PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.953e-21 Identity = 66/191 (34.55%), Postives = 105/191 (54.97%), Query Frame = -2 Query: 266 RTVCFPEIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARL-PRYMVPKTVVFKEELPKTSTGKIKKFELREM---AKAMGKSKV 826 + V F E V+D ++G ++ + GE+ RG +M GY+ +P T + DGW ++GD+ D + I DR K +I G ++ E+ES+L +P + +A V PD+ GE P A + L E K TEKEI++Y +++ + VVF +E+PK TGK+ ++RE+ AK GKSK+ Sbjct: 364 KVVPFFEAKVVDLDTGKTLGVN--QRGELCVRGPMIMSGYVNNPEATNALIDKDGWLHSGDIAYWDEDEHFFIVDRLKSLIKYKGYQVAPAELESILLQHPNIFDAGVAGLPDDDAGELPAAVVVL--EHGKTMTEKEIVDYVASQVTTAKKLRGGVVFVDEVPKGLTGKLDARKIREILIKAKKGGKSKL 550
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_STAAR (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain MRSA252) GN=menE PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.774e-21 Identity = 56/151 (37.09%), Postives = 88/151 (58.28%), Query Frame = -2 Query: 302 GEIVFRGGSMMLGYL--KDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFEL 748 GE++ +G ++M GYL D GT ++G+F TGD+ I +GY+ I DR KD+IISGGEN+ ++E+V P + +A V PD+ WG+ P + ++ + K ++I Y L +Y VPK + LP TSTGK+++ +L Sbjct: 347 GELMIKGANVMNGYLYPTDLTGTF----ENGYFNTGDIAEIDHEGYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGIIDAVCVGHPDDTWGQVPKLYFVSESNISK----AQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQRNKL 489
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_STAEQ (2-succinylbenzoate--CoA ligase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=menE PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.015e-20 Identity = 54/162 (33.33%), Postives = 90/162 (55.56%), Query Frame = -2 Query: 263 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGKSKVS 748 GE++ +G ++M GYL P + +DG+F TGD+ I +GY+ I DR KD+IISGGEN+ ++E++ + +A V D+ WG+ P + ++ + E+IE+ L RY +PK + LP TSTGK+++ +++ GK+ S Sbjct: 318 GELLIKGENVMNGYLY-PKYLKDTFDNDGYFQTGDIAEIDDEGYVIIYDRRKDLIISGGENIYPYQIETIAKDFEGIEDAVCVGISDDTWGQVPILYYVTNQDI----NQTELIEHFENHLARYKIPKKYYQVKSLPYTSTGKLQRKKVKSEDLNEGKNNES 474
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: FAT2_YEAST (Peroxisomal-coenzyme A synthetase OS=Saccharomyces cerevisiae GN=FAT2 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.326e-20 Identity = 52/161 (32.30%), Postives = 95/161 (59.01%), Query Frame = -2 Query: 272 LGEIVFRGGSMMLGYLKDPNGTRKCM-KDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELREMAKAMGKS 751 +GE+ RG ++ LGY +P ++ K + +F TGD G +G+L + R K++I GGE +S +E++ ++ ++P ++EA PD+ +G+ A + LK +K T +E++ + + L + +P V F ++LPKT+TGKI++ R +A+ KS Sbjct: 381 VGEVSIRGENVTLGYANNPKANKENFTKRENYFRTGDQGYFDPEGFLVLTGRIKELINRGGEKISPIELDGIMLSHPKIDEAVAFGVPDDMYGQVVQAAIVLKK--GEKMTYEELVNFLKKHLASFKIPTKVYFVDKLPKTATGKIQR---RVIAETFAKS 536
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_STAAU (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus GN=menE PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.732e-20 Identity = 55/151 (36.42%), Postives = 89/151 (58.94%), Query Frame = -2 Query: 302 GEIVFRGGSMMLGYL--KDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFEL 748 GE++ +G ++M YL D GT ++G+F TGD+ I +GY+ I DR KD+IISGGEN+ ++E+V P +++A V PD+ WG+ P + ++++ K ++I Y L +Y VPK + LP TSTGK+++ +L Sbjct: 347 GELMIKGANVMNVYLYPTDLTGTF----ENGYFNTGDIAEIDHEGYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDISK----AQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQRNKL 489
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_STAAT (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=menE PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.732e-20 Identity = 55/151 (36.42%), Postives = 89/151 (58.94%), Query Frame = -2 Query: 302 GEIVFRGGSMMLGYL--KDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFEL 748 GE++ +G ++M YL D GT ++G+F TGD+ I +GY+ I DR KD+IISGGEN+ ++E+V P +++A V PD+ WG+ P + ++++ K ++I Y L +Y VPK + LP TSTGK+++ +L Sbjct: 347 GELMIKGANVMNVYLYPTDLTGTF----ENGYFNTGDIAEIDHEGYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDISK----AQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQRNKL 489
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_STAAE (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain Newman) GN=menE PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.732e-20 Identity = 55/151 (36.42%), Postives = 89/151 (58.94%), Query Frame = -2 Query: 302 GEIVFRGGSMMLGYL--KDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFEL 748 GE++ +G ++M YL D GT ++G+F TGD+ I +GY+ I DR KD+IISGGEN+ ++E+V P +++A V PD+ WG+ P + ++++ K ++I Y L +Y VPK + LP TSTGK+++ +L Sbjct: 347 GELMIKGANVMNVYLYPTDLTGTF----ENGYFNTGDIAEIDHEGYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDISK----AQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQRNKL 489
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_STAAC (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain COL) GN=menE PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.732e-20 Identity = 55/151 (36.42%), Postives = 89/151 (58.94%), Query Frame = -2 Query: 302 GEIVFRGGSMMLGYL--KDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFEL 748 GE++ +G ++M YL D GT ++G+F TGD+ I +GY+ I DR KD+IISGGEN+ ++E+V P +++A V PD+ WG+ P + ++++ K ++I Y L +Y VPK + LP TSTGK+++ +L Sbjct: 347 GELMIKGANVMNVYLYPTDLTGTF----ENGYFNTGDIAEIDHEGYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDISK----AQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQRNKL 489 The following BLAST results are available for this feature:
BLAST of CB293848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 334
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293848 ID=CB293848; Name=CB293848; organism=Citrus sinensis; type=EST; length=887bpback to top |