CB293848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_STAA8 (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain NCTC 8325) GN=menE PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.732e-20 Identity = 55/151 (36.42%), Postives = 89/151 (58.94%), Query Frame = -2 Query: 302 GEIVFRGGSMMLGYL--KDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFEL 748 GE++ +G ++M YL D GT ++G+F TGD+ I +GY+ I DR KD+IISGGEN+ ++E+V P +++A V PD+ WG+ P + ++++ K ++I Y L +Y VPK + LP TSTGK+++ +L Sbjct: 347 GELMIKGANVMNVYLYPTDLTGTF----ENGYFNTGDIAEIDHEGYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDISK----AQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQRNKL 489
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_STAA3 (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain USA300) GN=menE PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.732e-20 Identity = 55/151 (36.42%), Postives = 89/151 (58.94%), Query Frame = -2 Query: 302 GEIVFRGGSMMLGYL--KDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFEL 748 GE++ +G ++M YL D GT ++G+F TGD+ I +GY+ I DR KD+IISGGEN+ ++E+V P +++A V PD+ WG+ P + ++++ K ++I Y L +Y VPK + LP TSTGK+++ +L Sbjct: 347 GELMIKGANVMNVYLYPTDLTGTF----ENGYFNTGDIAEIDHEGYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDISK----AQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQRNKL 489
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: LUCI_LUCMI (Luciferin 4-monooxygenase OS=Luciola mingrelica PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.262e-20 Identity = 59/155 (38.06%), Postives = 88/155 (56.77%), Query Frame = -2 Query: 287 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRY-MVPKTVVFKEELPKTSTGKIKKFELREMAK 748 GEI +G S+MLGY +P TR+ + ++GW +TGD+G D + I DR K +I G + E+ESVL +P + +A V PD GE P A + + E K TEKEI++Y +++ + + V F +E+PK TGKI +RE+ K Sbjct: 390 GEICVKGPSLMLGYSNNPEATRETIDEEGWLHTGDIGYYDEDEHFFIVDRLKSLIKYKGYQVPPAELESVLLQHPNIFDAGVAGVPDPDAGELPGAVVVM--EKGKTMTEKEIVDYVNSQVVNHKRLRGGVRFVDEVPKGLTGKIDAKVIREILK 542
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: LCFA_HAEIN (Long-chain-fatty-acid--CoA ligase OS=Haemophilus influenzae GN=fadD PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.954e-20 Identity = 57/151 (37.75%), Postives = 83/151 (54.97%), Query Frame = -2 Query: 296 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELRE 748 GE+ +G +M GY + P T + +KD GW TGD+ ++ L I DR KD+I+ G N+ E+E V+ N V+EA + P GET F+ K + T E+ +CR L Y VPK + F++ELPKT+ GKI + LR+ Sbjct: 407 GELWVKGDQVMRGYWQRPEATSEVLKD-GWMATGDIVIMDESYSLRIVDRKKDIILVSGFNVYPNEIEDVVMLNYKVSEAVAIGVPHAVSGETIKIFVVKK---DDSLTRDELRNHCRQYLTGYKVPKEIEFRDELPKTNVGKILRRVLRD 553
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: FAT2_SCHPO (Putative peroxisomal-coenzyme A synthetase OS=Schizosaccharomyces pombe GN=SPCC1827.03c PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.954e-20 Identity = 52/146 (35.62%), Postives = 85/146 (58.22%), Query Frame = -2 Query: 311 GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKK 748 GEI RG ++ GYL +P + D +F TGD G + DGY+ I R K+++ GGE +S E+++VL +P V+EA A PDE +G+ A ++ A K T K++ +Y ++ + +PK F + +PKT+TGK+++ Sbjct: 354 GEICVRGINVTKGYLNNPAANKSSFTKDRFFRTGDEGKLDKDGYVFITGRIKELVNRGGEKISPAEIDAVLMQHPDVSEAVCFAVPDEKYGQDIQAAINPVA--GKTVTPKQLHDYLEQKVAAFKIPKKFYFTDRIPKTATGKVQR 497
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: 4CLL9_ORYSJ (4-coumarate--CoA ligase-like 9 OS=Oryza sativa subsp. japonica GN=4CLL9 PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 3.858e-20 Identity = 59/171 (34.50%), Postives = 97/171 (56.73%), Query Frame = -2 Query: 296 EIDVIDSESGLSVSHDGASLGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELRE 808 E+ +D ++G S+ + + GE+ R S+M GY K T + + GW +TGDVG I DG + I DR K++I G ++ E+E+VL ++P+V +AAV PDE GE P A + + E+ E+EI+ Y R+ Y + + + +PK+ +GKI + +LR+ Sbjct: 379 EVKFVDPDTGRSLPAN--TPGELCVRSQSVMQGYYKRKEETERTVDGKGWLHTGDVGYIDGDGDVFIVDRIKELIKYKGFQVAPAELEAVLLSHPSVEDAAVFGVPDEEAGEVPVACVVRRHGAEE--GEEEIVAYVAERVASYKRVRVLHIVDAIPKSVSGKILRRQLRD 545
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: 4CL1_ORYSJ (Probable 4-coumarate--CoA ligase 1 OS=Oryza sativa subsp. japonica GN=4CL1 PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 3.858e-20 Identity = 65/192 (33.85%), Postives = 110/192 (57.29%), Query Frame = -2 Query: 296 ATERARMKSRQGVRTVCFPEIDVIDSESGLSVSHDGASL-GEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDE-FWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELRE 865 A E ++KS V E+ +ID ++G S+ G +L GEI RG +M GYL +P T+ + +GW +TGD+G + D + I DR K++I G ++ E+E++L T+P++ +AAVV + E GE P AF++ K E + +E ++ ++ + Y + V F +++PK +GKI + ELR+ Sbjct: 369 AKEPFKVKSGACGTVVRNAELKIIDPDTGKSL---GRNLPGEICIRGQQIMKGYLNNPEATKNTIDAEGWLHTGDIGYVDDDDEIFIVDRLKEIIKYRGFQVAPAELEALLITHPSIADAAVVGKQIEPEIGEIPVAFVA-KTE-GSELSEDDVKQFVAKEVIYYKKIREVFFVDKIPKAPSGKILRKELRK 555
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ACSM4_RAT (Acyl-coenzyme A synthetase ACSM4, mitochondrial OS=Rattus norvegicus GN=Acsm4 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.596e-20 Identity = 67/179 (37.43%), Postives = 94/179 (52.51%), Query Frame = -2 Query: 296 EIDVIDSESGLSVSHDGASLGEIVFRGGS-----MMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEK---EIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELRE 808 ++ +ID + S GEI R GS Y+ +P T ++ + ++ TGD GV+ DGYL R+ DVIIS G + EVES L +PAV E+AVV+ PD GE AF+ L A + EK E+ ++ + Y P+ V F +ELPKT TGKIK+ LR+ Sbjct: 400 DVQIIDEHGNILPS---GKEGEIALRLGSDRPFCFFSEYVDNPEKTDATIRRN-FYITGDRGVMDDDGYLWFVGRADDVIISSGYRIGPFEVESALIEHPAVVESAVVSSPDPIRGEVVKAFIVLAAPFKSSNREKLTAELQDHVKNSTAPYKYPRKVEFVQELPKTITGKIKRNVLRD 574
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: MENE_OCEIH (2-succinylbenzoate--CoA ligase OS=Oceanobacillus iheyensis GN=menE PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.466e-19 Identity = 53/150 (35.33%), Postives = 80/150 (53.33%), Query Frame = -2 Query: 302 LGEIVFRGGSMMLGYLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEKEIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFEL 751 +GEI+ +G + GY K T K + ++ W +TGD+G + GYL + DR D+IISGGEN+ E+E+VL + EA V P+E WG P AF+ + +E EI + L +Y PK + ELP+ + K+ + L Sbjct: 334 IGEILVKGPMVTKGYYKRAE-TNKEVFENNWLHTGDMGYLDEQGYLYVVDRRNDLIISGGENIYPSEIENVLVQIEGIEEAGVKGSPNEEWGMVPIAFIVCSRPI----SENEIAAHLEKYLAKYKRPKEIHVVNELPRNAANKLVRHNL 478
BLAST of CB293848 vs. ExPASy Swiss-Prot
Match: ACSM4_HUMAN (Acyl-coenzyme A synthetase ACSM4, mitochondrial OS=Homo sapiens GN=ACSM4 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.466e-19 Identity = 58/141 (41.13%), Postives = 82/141 (58.16%), Query Frame = -2 Query: 296 YLKDPNGTRKCMKDDGWFYTGDVGVIHADGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPDEFWGETPCAFLSLKAELEKKPTEK---EIIEYCRARLPRYMVPKTVVFKEELPKTSTGKIKKFELRE 709 Y+ +P T ++ D ++ TGD GV+ +DGY R+ DVIIS G + EVES L +PAV E+AVV+ PD+ GE AF+ L A + EK E+ ++ + Y P+ V F +ELPKT TGKIK+ LR+ Sbjct: 435 YVDNPQKTAATIRGD-FYVTGDRGVMDSDGYFWFVGRADDVIISSGYRIGPFEVESALIEHPAVVESAVVSSPDQIRGEVVKAFVVLAAPFKSYNPEKLTLELQDHVKKSTAPYKYPRKVEFVQELPKTITGKIKRNVLRD 574 The following BLAST results are available for this feature:
BLAST of CB293848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 334
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293848 ID=CB293848; Name=CB293848; organism=Citrus sinensis; type=EST; length=887bpback to top |