CB293880
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293880 vs. ExPASy Swiss-Prot
Match: GBB3_MOUSE (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 OS=Mus musculus GN=Gnb3 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.304e-13 Identity = 56/184 (30.43%), Postives = 87/184 (47.28%), Query Frame = -3 Query: 240 QEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSLDAGAVIHALCFSPNRYWLCAATEQ-SIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYC--TSLNWSVDGSPLFSGYTDGVIRVW 779 +E AHT ++SC RF + IV++S D T +W++ + + GHTG ++AVSPD L SG D LWD+ EG R + I+A+CF PN +C ++ S +++DL + + + +I C TS+ +S+ G LF+GY D VW Sbjct: 137 RELSAHTGYLSCCRFLDDN---NIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSQE--------------------SIICGITSVAFSLSGRLLFAGYDDFNCNVW 297
BLAST of CB293880 vs. ExPASy Swiss-Prot
Match: GBB3_RAT (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 OS=Rattus norvegicus GN=Gnb3 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.703e-13 Identity = 56/184 (30.43%), Postives = 87/184 (47.28%), Query Frame = -3 Query: 240 QEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSLDAGAVIHALCFSPNRYWLCAATEQ-SIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYC--TSLNWSVDGSPLFSGYTDGVIRVW 779 +E AHT ++SC RF + IV++S D T +W++ + + GHTG ++AVSPD L SG D LWD+ EG R + I+A+CF PN +C ++ S +++DL + + + +I C TS+ +S+ G LF+GY D VW Sbjct: 137 RELSAHTGYLSCCRFLDDN---NIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSHE--------------------SIICGITSVAFSLSGRLLFAGYDDFNCNVW 297
BLAST of CB293880 vs. ExPASy Swiss-Prot
Match: GBB3_HUMAN (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 OS=Homo sapiens GN=GNB3 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.703e-13 Identity = 56/184 (30.43%), Postives = 88/184 (47.83%), Query Frame = -3 Query: 240 QEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSLDAGAVIHALCFSPNRYWLCAATEQ-SIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYC--TSLNWSVDGSPLFSGYTDGVIRVW 779 +E AHT ++SC RF + IV++S D T +W++ + + GHTG ++AVSPD +L SG D LWD+ EG R + I+A+CF PN +C ++ S +++DL + + ++I C TS+ +S+ G LF+GY D VW Sbjct: 137 RELSAHTGYLSCCRFLDDN---NIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQEL--------------------ICFSHESIICGITSVAFSLSGRLLFAGYDDFNCNVW 297
BLAST of CB293880 vs. ExPASy Swiss-Prot
Match: GBB3_CANFA (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 OS=Canis familiaris GN=GNB3 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.224e-13 Identity = 55/184 (29.89%), Postives = 87/184 (47.28%), Query Frame = -3 Query: 240 QEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSLDAGAVIHALCFSPNRYWLCAATEQ-SIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYC--TSLNWSVDGSPLFSGYTDGVIRVW 779 +E AHT ++SC RF + IV++S D T +W++ + + GHTG ++AVSPD L SG D LWD+ EG R + I+A+CF PN +C ++ S +++DL + + + +I C TS+ +S+ G LF+GY D +W Sbjct: 137 RELSAHTGYLSCCRFLDDN---NIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSDE--------------------SIICGITSVAFSLSGRLLFAGYDDFNCNIW 297
BLAST of CB293880 vs. ExPASy Swiss-Prot
Match: WDR5B_MOUSE (WD repeat-containing protein 5B OS=Mus musculus GN=Wdr5b PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.954e-13 Identity = 50/181 (27.62%), Postives = 86/181 (47.51%), Query Frame = -3 Query: 234 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL--DAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSP-LFSGYTDGVIRVWGI 764 H+++V C F+P + IVS S+D +VK+W + K TL+ H+ ++ V + +GSL SG DG+ +WD A G+ L +L + + + FSPN +Y L A + ++K+WD ++ YC ++SV G + SG D ++ +W + Sbjct: 122 HSDFVFCCDFNPPS--NLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLK------------------TYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNL 282
BLAST of CB293880 vs. ExPASy Swiss-Prot
Match: WD51B_HUMAN (WD repeat-containing protein 51B OS=Homo sapiens GN=WDR51B PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.470e-13 Identity = 42/128 (32.81%), Postives = 71/128 (55.47%), Query Frame = -3 Query: 390 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL--YSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLK 764 HT WV C +FSP+ IVS S D+T+K+W+ +N + + G+ N V +P G+ AS G D + +WD+ K L Y + +G V + + F P+ Y + A+++ ++KI DL ++ L+ Sbjct: 143 HTHWVRCAKFSPDGR--LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGV-NCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQ 267
BLAST of CB293880 vs. ExPASy Swiss-Prot
Match: WDR5B_RAT (WD repeat-containing protein 5B OS=Rattus norvegicus GN=Wdr5b PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.450e-13 Identity = 50/181 (27.62%), Postives = 85/181 (46.96%), Query Frame = -3 Query: 234 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL--DAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSP-LFSGYTDGVIRVWGI 764 H+++V C F+P + IVS S+D +VK+W + K TL+ H+ ++ V +GSL SG DG+ +WD A G+ L +L + + + FSPN +Y L A + ++K+WD ++ YC ++SV G + SG D ++ +W + Sbjct: 122 HSDFVFCCDFNPPS--NLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVHFHCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDSTLKLWDYSRGRCLK------------------TYTGHKNEKYCIFASFSVTGRKWVVSGSEDNMVYIWNL 282
BLAST of CB293880 vs. ExPASy Swiss-Prot
Match: WD51B_PONAB (WD repeat-containing protein 51B OS=Pongo abelii GN=WDR51B PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.450e-13 Identity = 42/128 (32.81%), Postives = 71/128 (55.47%), Query Frame = -3 Query: 390 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL--YSLDAGAVIHALCFSP-NRYWLCAATEQSIKIWDLESKSIVEDLK 764 HT WV C +FSP+ IVS S D+T+K+W+ +N + + G+ N V +P G+ AS G D + +WD+ K L Y + +G V + + F P + Y + A+++ ++KI DL ++ L+ Sbjct: 143 HTHWVRCAKFSPDGR--LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGV-NCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQ 267
BLAST of CB293880 vs. ExPASy Swiss-Prot
Match: WDS_DROME (Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.104e-12 Identity = 48/177 (27.12%), Postives = 87/177 (49.15%), Query Frame = -3 Query: 240 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALC-FSPNRYWLCAAT-EQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSPLFSGYTDGVIRVW 764 HT+ VS V+FSPN + S+S D+ +K+W + K T++GH ++ VA S D L SG D + +W+L+ GK L +L + C F+P + + + ++S++IWD+ + ++ L ++++++ DGS + S DG+ R+W Sbjct: 71 HTKAVSAVKFSPNG--EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDP--------------------VSAVHFNRDGSLIVSSSYDGLCRIW 225
BLAST of CB293880 vs. ExPASy Swiss-Prot
Match: POF1_SCHPO (F-box/WD repeat-containing protein pof1 OS=Schizosaccharomyces pombe GN=pof1 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.104e-12 Identity = 57/178 (32.02%), Postives = 79/178 (44.38%), Query Frame = -3 Query: 240 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAG-AVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSV--DGSPLFSGYTDGVIRVW 764 HT+ V C+ F L VS S D TVK+W+ S K R TL GHTG VN+V + D L SG D I +W L L++ A + +L + +R + C + + +IK WD+E K V L + W + D L SG DGV++VW Sbjct: 352 HTDSVLCLTFDSTLL----VSGSADCTVKLWHFSGGK-RITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSRLFSC-SLDGTIKQWDIEKKKCVHTLFGHIEGV------------------------WEIAADHLRLISGAHDGVVKVW 499 The following BLAST results are available for this feature:
BLAST of CB293880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293880 ID=CB293880; Name=CB293880; organism=Citrus sinensis; type=EST; length=793bpback to top |