CB293880
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293880 vs. ExPASy Swiss-Prot
Match: GBB1_RAT (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus GN=Gnb1 PE=1 SV=4) HSP 1 Score: 70.0922 bits (170), Expect = 1.594e-11 Identity = 52/179 (29.05%), Postives = 83/179 (46.37%), Query Frame = -3 Query: 240 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYC--TSLNWSVDGSPLFSGYTDGVIRVW 764 HT ++SC RF + IV++S D T +W++ + T GHTG V +++++PD L SG D LWD+ EG R + I+A+CF PN + + + + +++DL + + D NI C TS+++S G L +GY D VW Sbjct: 142 HTGYLSCCRFLDDN---QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD--------------------NIICGITSVSFSKSGRLLLAGYDDFNCNVW 297
BLAST of CB293880 vs. ExPASy Swiss-Prot
Match: GBB1_PONAB (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Pongo abelii GN=GNB1 PE=2 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.594e-11 Identity = 52/179 (29.05%), Postives = 83/179 (46.37%), Query Frame = -3 Query: 240 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYC--TSLNWSVDGSPLFSGYTDGVIRVW 764 HT ++SC RF + IV++S D T +W++ + T GHTG V +++++PD L SG D LWD+ EG R + I+A+CF PN + + + + +++DL + + D NI C TS+++S G L +GY D VW Sbjct: 142 HTGYLSCCRFLDDN---QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD--------------------NIICGITSVSFSKSGRLLLAGYDDFNCNVW 297
BLAST of CB293880 vs. ExPASy Swiss-Prot
Match: GBB1_MOUSE (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Mus musculus GN=Gnb1 PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.594e-11 Identity = 52/179 (29.05%), Postives = 83/179 (46.37%), Query Frame = -3 Query: 240 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYC--TSLNWSVDGSPLFSGYTDGVIRVW 764 HT ++SC RF + IV++S D T +W++ + T GHTG V +++++PD L SG D LWD+ EG R + I+A+CF PN + + + + +++DL + + D NI C TS+++S G L +GY D VW Sbjct: 142 HTGYLSCCRFLDDN---QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD--------------------NIICGITSVSFSKSGRLLLAGYDDFNCNVW 297
BLAST of CB293880 vs. ExPASy Swiss-Prot
Match: GBB1_HUMAN (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Homo sapiens GN=GNB1 PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.594e-11 Identity = 52/179 (29.05%), Postives = 83/179 (46.37%), Query Frame = -3 Query: 240 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYC--TSLNWSVDGSPLFSGYTDGVIRVW 764 HT ++SC RF + IV++S D T +W++ + T GHTG V +++++PD L SG D LWD+ EG R + I+A+CF PN + + + + +++DL + + D NI C TS+++S G L +GY D VW Sbjct: 142 HTGYLSCCRFLDDN---QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD--------------------NIICGITSVSFSKSGRLLLAGYDDFNCNVW 297
BLAST of CB293880 vs. ExPASy Swiss-Prot
Match: GBB1_DANRE (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Danio rerio GN=gnb1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.594e-11 Identity = 54/179 (30.17%), Postives = 85/179 (47.49%), Query Frame = -3 Query: 240 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYC--TSLNWSVDGSPLFSGYTDGVIRVW 764 HT ++SC RF + IV++S D T +W++ + T AGHTG V +++++PD L SG D LWD+ EG R + I+A+CF PN + + + + +++DL + ++L V NI C TS+ +S G L +GY D VW Sbjct: 142 HTGYLSCCRFLDDN---QIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD---QELMV-----------------YSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVW 297
BLAST of CB293880 vs. ExPASy Swiss-Prot
Match: GBB1_CANFA (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Canis familiaris GN=GNB1 PE=2 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.594e-11 Identity = 52/179 (29.05%), Postives = 83/179 (46.37%), Query Frame = -3 Query: 240 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYC--TSLNWSVDGSPLFSGYTDGVIRVW 764 HT ++SC RF + IV++S D T +W++ + T GHTG V +++++PD L SG D LWD+ EG R + I+A+CF PN + + + + +++DL + + D NI C TS+++S G L +GY D VW Sbjct: 142 HTGYLSCCRFLDDN---QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD--------------------NIICGITSVSFSKSGRLLLAGYDDFNCNVW 297
BLAST of CB293880 vs. ExPASy Swiss-Prot
Match: GBB1_BOVIN (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Bos taurus GN=GNB1 PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.594e-11 Identity = 52/179 (29.05%), Postives = 83/179 (46.37%), Query Frame = -3 Query: 240 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYC--TSLNWSVDGSPLFSGYTDGVIRVW 764 HT ++SC RF + IV++S D T +W++ + T GHTG V +++++PD L SG D LWD+ EG R + I+A+CF PN + + + + +++DL + + D NI C TS+++S G L +GY D VW Sbjct: 142 HTGYLSCCRFLDDN---QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD--------------------NIICGITSVSFSKSGRLLLAGYDDFNCNVW 297
BLAST of CB293880 vs. ExPASy Swiss-Prot
Match: TAF5L_MOUSE (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.081e-11 Identity = 41/127 (32.28%), Postives = 67/127 (52.76%), Query Frame = -3 Query: 414 YTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGA-VIHALCFSPNRYWLCAAT-EQSIKIWDLES 788 Y ++ H V CV+F PN+ + + S D+TV++W+ GH G V +++ SP+G AS G+D + LWDLA G L I +L FSP+ + +A+ + S+++WD+ S Sbjct: 417 YPLRIYAGHLADVDCVKFHPNSNY--LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRS 541 HSP 2 Score: 69.3218 bits (168), Expect = 2.718e-11 Identity = 54/186 (29.03%), Postives = 83/186 (44.62%), Query Frame = -3 Query: 234 IQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK--RLYSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSPLFSGYTDGVIRVWGI 782 + +G A+ W V SP +L S S DRT ++W+ AGH V+ V P+ + A+G D + LW +G RL++ G V+ +L FSPN +Y A +Q +K+WDL S ++ ++L+ TSL +S D + S D +RVW I Sbjct: 379 LYQGHAYPVWD--VDISPFSLY--FASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVL-SLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELR--------------------GHTDSITSLAFSPDSGLIASASMDNSVRVWDI 539
BLAST of CB293880 vs. ExPASy Swiss-Prot
Match: Y1491_SYNY3 (Uncharacterized WD repeat-containing protein sll1491 OS=Synechocystis sp. (strain PCC 6803) GN=sll1491 PE=4 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.718e-11 Identity = 48/172 (27.91%), Postives = 81/172 (47.09%), Query Frame = -3 Query: 234 VRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV-IHALCFSPNRYWLCAAT-EQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSPLFSGYTDGVIRVWGI 743 V F+P+ Q + DRT+K W+ + +L T G++N +AV+PDG G + W+LA+ K L+S+ ++ I+ + SPN W+ A E +I I+DL + V L+ + SL +S DG+ L+SG D +++W + Sbjct: 193 VVFTPDGSQFITGAIGQDRTIKFWDANTFELLGTSPQQPGFINGLAVTPDGRKLV-GAVRNFVKAWNLADAKELFSVRGPSLEINTIAVSPNNRWVATANKEGTIMIFDLANGKQVTTLR--------------------GHQGWVLSLAFSPDGNTLYSGAEDKTVKIWDL 343
BLAST of CB293880 vs. ExPASy Swiss-Prot
Match: GBB1_CRIGR (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Cricetulus griseus GN=GNB1 PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 2.718e-11 Identity = 52/179 (29.05%), Postives = 83/179 (46.37%), Query Frame = -3 Query: 240 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYC--TSLNWSVDGSPLFSGYTDGVIRVW 764 HT ++SC RF + IV++S D T +W++ + T GHTG V +++++PD L SG D LWD+ EG R + I+A+CF PN + + + + +++DL + + D NI C TS+++S G L +GY D VW Sbjct: 142 HTGYLSCCRFLNDN---QIVTSSEDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD--------------------NIICGITSVSFSKSGRLLLAGYDDFNCNVW 297 The following BLAST results are available for this feature:
BLAST of CB293880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293880 ID=CB293880; Name=CB293880; organism=Citrus sinensis; type=EST; length=793bpback to top |