CB293887

Overview
NameCB293887
Unique NameCB293887
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.769e-42
Identity = 79/132 (59.85%), Postives = 96/132 (72.73%), Query Frame = 2
Query:    8 ADVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSH 403
            A+VD+YK DPWDLP KA FG KEWYFF+PRDRKYPNG+RPNRAA  GYWKATG DK +   +       +G+KKALVFY G+ P+GVKT+WIMHEYRLA+  +         K  S +LD+WVLCR+Y K +
Sbjct:   54 AEVDLYKLDPWDLPEKALFGRKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPV---APKGSARTVGIKKALVFYSGKAPRGVKTDWIMHEYRLADADR-----APGGKKGSQKLDEWVLCRLYNKKN 177          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC77_ORYSJ (NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 5.513e-36
Identity = 92/265 (34.72%), Postives = 131/265 (49.43%), Query Frame = 2
Query:   11 DVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIIL-----------ATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLN-HTKMRPKDSSMRLDDWVLCRIYRKSH---------------------VSLPTS-AGAASDHDLEEEEEKFNLHDTLLP----------ILRSPPSHNTTLNPQKSSSFSNLLDAMDYSMLSNFLSENQTSHTGSESNPLFNSGILEQH 673
            +VD+ K +PWDLP+KA  GEKEWYFFS +D KYP G R NRA   GYWKATG D+ I              S    ++ +G+KK LVFY GR PKG KTNW+MHE+RL  N  N + + ++ PK      D+WV+C+++ K                          P S +      D++  ++ F L D + P          IL +PP++N  +    +S+ +    A+ +    N+ S    S + S SN    S  L+QH
Sbjct:   53 EVDLNKCEPWDLPSKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRLHANLHNHHPNLRLNPK------DEWVVCKVFHKKQGDEAINNQQQQPQYAAVDQYSAETPNSGSSVVQAGDIDGGDDFFQLDDIIDPSIYFVSNSSNILSAPPNNNNAVYSVSASTTTTNTTAVSFQQQPNYYSLINKSSSSSSSN---YSAPLQQH 308          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC9_ARATH (Putative NAC domain-containing protein 9 OS=Arabidopsis thaliana GN=NAC009 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.951e-34
Identity = 77/191 (40.31%), Postives = 110/191 (57.59%), Query Frame = 2
Query:   14 VDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHV--------SLPTSAGAASDHDLEEEEEKFNLHDTLLPILRSPPS----HNTTLNPQKSSS 550
            +DIYK+DPWDLP  A  GEKEWYF+ PRDRKY N +RPNR   +G+WKATGTD+ I ++      + IG+KK+LVFYKGR  KGVKT+W+MHE+RL    +    +K          D W +CRI++K++         S  +S    +  D    +++ N +      +  P S    H+  +N  K+S+
Sbjct:   51 LDIYKYDPWDLPKFAMTGEKEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSE---GNKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLSEPSPPSKRFFDSPVSPNDSWAICRIFKKTNTTTLRALSHSFVSSLPPETSTDTMSNQKQSNTYHFSSDKILKPSSHFQFHHENMNTPKTSN 238          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.951e-34
Identity = 84/222 (37.84%), Postives = 115/222 (51.80%), Query Frame = 2
Query:    2 H*ADVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIY-----RKSHVSLPTSAGAASDHDLEEEEEKFNLHDTLLPILRSPPSHNTTLNPQKSSSFSNLLDAMDYSMLSNFLSENQTSHTGSESNPLFN 652
            H ++VD+ + +PW+LP  A  GE+EWYF+S RDRKYP G R NRA  +GYWKATG DK + +   G   + +G+KK LVFYKGR P+G+KT W+MHEYRL EN  +  HT           ++WV+CR++     RK+   +        +H L         H   LP+L  P +   T  P      S L D    +  +N      + H   E   L N
Sbjct:   53 HISEVDLNRCEPWELPEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFS---GGGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRL-ENDHSHRHTCK---------EEWVICRVFNKTGDRKNVGLIHNQISYLHNHSLSTTHHH---HHEALPLLIEPSNKTLTNFP------SLLYDDPHQNYNNNNFLHGSSGHNIDELKALIN 252          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC94_ARATH (Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.739e-34
Identity = 72/142 (50.70%), Postives = 93/142 (65.49%), Query Frame = 2
Query:   14 VDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLA-------ENPKNLNHTK--MRPKDSSMRL---DDWVLCRIYRKSH 403
            VDIYK+DPWDLP  AA GEKEWYF+ PRDRKY N  RPNR    G+WKATGTD+ I +         IG+KK+LVFY+GR  KGVKT+W+MHE+RL         +  N N+ K  +   ++S  L   D W +CRI++K++
Sbjct:   55 VDIYKYDPWDLPKLAAMGEKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLD---STRCIGLKKSLVFYRGRAAKGVKTDWMMHEFRLPSLSDSHHSSYPNYNNKKQHLNNNNNSKELPSNDAWAICRIFKKTN 193          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.345e-33
Identity = 72/144 (50.00%), Postives = 95/144 (65.97%), Query Frame = 2
Query:    8 ADVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHVSLPTSAGAASD 439
            A+VD+ K +PW LP +A  GEKEWYFFS RDRKYP G R NRA  +GYWKATG D+ I ++   A    +G+KK LVFYKGR PKG K+NW+MHEYRL E   + +      K      D+WV+ R+++K+ ++   S GA S+
Sbjct:   50 AEVDLNKCEPWQLPGRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCA---LVGMKKTLVFYKGRAPKGEKSNWVMHEYRL-EGKFSYHFISRSSK------DEWVISRVFQKTTLA---STGAVSE 180          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC22_ARATH (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 3.345e-33
Identity = 86/221 (38.91%), Postives = 117/221 (52.94%), Query Frame = 2
Query:   14 VDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHVSLPTSAGAASDHDLEEEEEKFNLHDTLLPILRSPPS-----HNTTLNPQKSSSFSNLLDAMDY-SMLSNFLSENQTSHTGSESNPLFNSG 658
            VD+ K +PWD+P  A  G K+WYF+S RDRKY  G R NRA A+GYWKATG D+ IL        + +G++K LVFY+GR P+G KT+W+MHE+RL  +    NH+   PK      +DWVLCR++ K+   +       S  D         L D  +   + P S     H+  +N +    FSNL       S L+N +SE +        NPLF  G
Sbjct:   55 VDLNKCEPWDIPKMACVGGKDWYFYSQRDRKYATGLRTNRATATGYWKATGKDRTILRKG-----KLVGMRKTLVFYQGRAPRGRKTDWVMHEFRLQGSHHPPNHSLSSPK------EDWVLCRVFHKNTEGVICRDNMGSCFDETASASLPPLMDPYINFDQEPSSYLSDDHHYIIN-EHVPCFSNLSQNQTLNSNLTNSVSELKI--PCKNPNPLFTGG 261          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.405e-31
Identity = 70/133 (52.63%), Postives = 88/133 (66.17%), Query Frame = 2
Query:    8 ADVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHV 406
            + VD+ K +PW+LP KA  GEKEWYFF+ RDRKYP G R NRA  +GYWKATG D+ I ++     +  +G+KK LVFYKGR PKG K+ W+MHEYRL  + K   H       SS   D+WVLC++  KS V
Sbjct:   53 SQVDLNKSEPWELPEKAKMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKT---KSLLGMKKTLVFYKGRAPKGEKSCWVMHEYRL--DGKFSYH-----YISSSAKDEWVLCKVCLKSGV 175          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC12_ARATH (NAC domain-containing protein 12 OS=Arabidopsis thaliana GN=NAC012 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.089e-31
Identity = 80/221 (36.20%), Postives = 119/221 (53.85%), Query Frame = 2
Query:   11 DVDIYKFDPWDLPAKAAFG---EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKD-SSMRLDDWVLCRIYRKSHV----SLPTSAGAASDHDLEEEEEKFNLHDTLLPILRSPPSHNTTLNPQKSSSFSNLLDAMDYSMLSNFLSENQTSHTGSESNPLF 649
            +VD+ K +PWD+  +   G   + +WYFFS +D+KYP G R NRA  +G+WKATG DKII +         IG++K LVFYKGR P G K++WIMHEYRL + P +  +  +  +D  S   + WV+CR++RK +       P    ++   D EEE              + P  HNT    Q  +   ++L  MD +  +  + E+QT+ T  + + LF
Sbjct:   50 EVDLNKLEPWDIQEECRIGSTPQNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKIICSC-----VRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRLDDTPMSNGYADVVTEDPMSYNEEGWVVCRVFRKKNYQKIDDCPKITLSSLPDDTEEE--------------KGPTFHNT----QNVTGLDHVLLYMDRTGSNICMPESQTT-TQHQDDVLF 246          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC43_ARATH (NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.554e-30
Identity = 68/151 (45.03%), Postives = 95/151 (62.91%), Query Frame = 2
Query:   11 DVDIYKFDPWDLPAKAAFG---EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAEN---PKNLN-HTKMRPKDSSMRLDDWVLCRIYRKS--HVSLPTSAGAAS 436
            DVD+ K +PWD+      G   + +WYFFS +D+KYP G R NRA A+G+WKATG DKII +         IG++K LVFYKGR P G K++WIMHEYRL +N   P+++  H  +     + + + WV+CRI++K   H +L +  G AS
Sbjct:   50 DVDLNKLEPWDIQEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSNG-----RRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNIISPEDVTVHEVVSIIGEASQDEGWVVCRIFKKKNLHKTLNSPVGGAS 195          
The following BLAST results are available for this feature:
BLAST of CB293887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
NAC68_ORYSJ1.769e-4259.85NAC domain-containing protein 68 OS=Oryza sativa s... [more]
NAC77_ORYSJ5.513e-3634.72NAC domain-containing protein 77 OS=Oryza sativa s... [more]
NAC9_ARATH3.951e-3440.31Putative NAC domain-containing protein 9 OS=Arabid... [more]
NAC31_ARATH3.951e-3437.84Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thal... [more]
NAC94_ARATH6.739e-3450.70Putative NAC domain-containing protein 94 OS=Arabi... [more]
NAC98_ARATH3.345e-3350.00Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thal... [more]
NAC22_ARATH3.345e-3338.91NAC domain-containing protein 21/22 OS=Arabidopsis... [more]
NAC54_ARATH1.405e-3152.63Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]
NAC12_ARATH4.089e-3136.20NAC domain-containing protein 12 OS=Arabidopsis th... [more]
NAC43_ARATH1.554e-3045.03NAC domain-containing protein 43 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06de03_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06de03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293887 ID=CB293887; Name=CB293887; organism=Citrus sinensis; type=EST; length=798bp
GCACTAGGCTGATGTTGATATTTACAAGTTTGATCCATGGGATTTACCAG
CCAAGGCTGCCTTCGGTGAGAAAGAGTGGTATTTTTTCAGTCCTAGAGAC
CGAAAGTACCCGAATGGAGCCAGGCCGAACAGGGCAGCTGCATCCGGGTA
TTGGAAGGCGACAGGCACGGATAAGATCATCTTGGCAACATCTGTGGGAG
CTCATCAAGAAAACATTGGTGTGAAGAAAGCTCTTGTGTTCTACAAAGGC
AGGCCTCCGAAGGGAGTTAAAACTAATTGGATTATGCATGAGTATCGCCT
TGCTGAAAACCCCAAGAATCTCAATCACACCAAGATGAGGCCCAAAGACT
CTTCCATGAGGTTGGATGATTGGGTTCTCTGCCGCATCTACCGCAAGTCC
CATGTCTCCCTGCCAACATCAGCCGGTGCAGCAAGTGATCATGATCTAGA
AGAAGAGGAGGAAAAATTTAACCTTCATGACACCCTGTTGCCGATCCTGA
GAAGTCCACCAAGCCACAACACTACTCTCAATCCTCAGAAATCTTCATCC
TTCTCCAACTTATTGGATGCAATGGACTACTCAATGCTGAGTAATTTTCT
ATCCGAGAACCAAACGAGTCATACCGGATCTGAATCCAACCCGCTGTTCA
ATTCAGGGATTTTAGAGCAGCACCATTCTTCATTCAACAATGGCAATGGC
AATGGCGCCAACACGAACACAAGTTGCACTAACAGTTTTCTGATTCAAAA
ACTACCTCAGTTGAACTATTCAGTTTTCAACAATATGGAGAACCAGCA
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