CB293887

Overview
NameCB293887
Unique NameCB293887
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC42_ARATH (NAC domain-containing protein 42 OS=Arabidopsis thaliana GN=NAC042 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.904e-30
Identity = 78/228 (34.21%), Postives = 113/228 (49.56%), Query Frame = 2
Query:   14 VDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIY---------------RKSHVSLPTSAGAASDHDLEEEEEKFNLHDTLLPILRSPPSHNTTLNPQKSSSFSNLLDAMDYSMLSNFLSENQTSHTGSESNPLFN 652
            +DIYK+DPWDLP  ++ GEKEWYFF  R RKY N  RPNR   SG+WKATG DK      V ++ + +G+KK+LV+Y G   KG KT+W+MHE+RL    K            + + + W LCRI+               RK  ++L  +    S  D +        H T+  +   PP       PQ  + + N           + +  NQ ++TG+++N L +
Sbjct:   53 IDIYKYDPWDLPRVSSVGEKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDK-----PVYSNLDCVGLKKSLVYYLGSAGKGTKTDWMMHEFRLPSTTKT--------DSPAQQAEVWTLCRIFKRVTSQRNPTILPPNRKPVITLTDTCSKTSSLDSDHTS-----HRTVDSMSHEPPL------PQPQNPYWN----------QHIVGFNQPTYTGNDNNLLMS 246          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC76_ORYSJ (NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 5.526e-28
Identity = 64/152 (42.11%), Postives = 86/152 (56.58%), Query Frame = 2
Query:   11 DVDIYKFDPWDLPAKAAFG---EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHVSL---PTSAGAASDHDL 448
            ++D+ K +PWDL  +   G   + EWYFFS +D+KYP G R NRA  +G+WKATG DK I      A+   IG++K LVFY GR P G KT+WIMHEYRL ++            +  ++ D WV+CR++ K        P    A  D DL
Sbjct:   44 EIDLNKLEPWDLKDRCRIGTGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFL----ANACRIGMRKTLVFYVGRAPHGKKTDWIMHEYRLDQD------------NVDVQEDGWVVCRVFMKKSYQRGLNPADMAAVDDDDL 179          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC7_ARATH (NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 7.217e-28
Identity = 59/132 (44.70%), Postives = 81/132 (61.36%), Query Frame = 2
Query:   11 DVDIYKFDPWDLPAKAAFGEKE---WYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRK 397
            D+D+YK +PWDL      G +E   WYFFS +D+KYP G R NRA  +G+WKATG DK I           IG++K LVFYKGR P G K++WIMHEYRL  +           ++ + + + WV+CR+++K
Sbjct:   41 DIDLYKIEPWDLQELCKIGHEEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIY-----LRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETD-----------ENGTPQEEGWVVCRVFKK 156          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC78_ARATH (NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 4.678e-27
Identity = 66/152 (43.42%), Postives = 90/152 (59.21%), Query Frame = 2
Query:   17 DIYKFDPWDLPAKAAFGEK--EWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHVSLPTSAGAASDHDLEEEEEK 466
            DIYK +PWDLP K+    +  EWYFFS  D+KY NG++ NRA   GYWK TG D+ I   S       +G+KK LV++KGR P+G +TNW+MHEYRL++            K + +  + +VLCRI++KS    P +        LEEE E+
Sbjct:   45 DIYKSEPWDLPDKSKLKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGS-----RVVGMKKTLVYHKGRAPRGERTNWVMHEYRLSDEDL---------KKAGVPQEAYVLCRIFQKSGTG-PKNGEQYGAPYLEEEWEE 181          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC74_ORYSJ (NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.979e-27
Identity = 60/132 (45.45%), Postives = 83/132 (62.88%), Query Frame = 2
Query:   11 DVDIYKFDPWDLPAKAAFG--EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKS 400
            +VDIYK +PWDLPAK      + +W+FF+ RDRKYPNG+R NRA  +GYWK+TG D+     ++   ++ IG KK LVF++GRPP G +T WIMHEY + E            +      D +VLCRI +++
Sbjct:   43 EVDIYKHEPWDLPAKCDVPTQDNKWHFFAARDRKYPNGSRSNRATVAGYWKSTGKDR-----AIKMGKQTIGTKKTLVFHEGRPPTGRRTEWIMHEYYIDER---------ECQACPDMKDAYVLCRITKRN 160          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC66_ARATH (NAC domain-containing protein 66 OS=Arabidopsis thaliana GN=NAC066 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.322e-26
Identity = 57/139 (41.01%), Postives = 83/139 (59.71%), Query Frame = 2
Query:   11 DVDIYKFDPWDLPAKAAFG---EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAE----NPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHV 406
            D+D+ K +PWD+      G   + +WYF+S +D+KYP G R NRA   G+WKATG DK I         + IG++K LVFYKGR P G K++WIMHEYRL E    +    +   +   D     + WV+CR+++K+++
Sbjct:   45 DIDLNKLEPWDIQEMCKIGTTPQNDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIYTNG-----DRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDESVLISSCGDHDVNVETCDVIGSDEGWVVCRVFKKNNL 178          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC69_ARATH (NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.845e-16
Identity = 65/218 (29.82%), Postives = 96/218 (44.04%), Query Frame = 2
Query:    8 ADVDIYKFDPWDLPA--KAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRK------------------SHVSLPTSAGAASDHDLE---------------------EEEEKFNLHDTLLPILRSPPSHNTTLNPQ 538
            ++++I  +DP  LP+  K    +  WYFF P++          R  +SGYWKATG D+ I       ++  IG+KK LV+Y+GR PKGV T W+MHEY          H    P+D      ++V+C++  K                  S VS   +  A S   LE                      E+E F+L D L P +    ++N T++PQ
Sbjct:   38 SEINICSYDPIYLPSLSKIKSDDPVWYFFCPKEYTSAKKKVTKRTTSSGYWKATGVDRKI--KDKRGNRGEIGIKKTLVYYEGRVPKGVWTPWVMHEY----------HITCLPQDQR----NYVICQVMYKGEDGDVPSGGNNSSEPSQSLVSDSNTVRATSPTALEFEKPGQENFFGMSVDDLGTPKNEQEDFSLWDVLDPDMLFSDNNNPTVHPQ 239          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC90_ARATH (NAC domain-containing protein 90 OS=Arabidopsis thaliana GN=NAC090 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.844e-15
Identity = 44/130 (33.85%), Postives = 66/130 (50.77%), Query Frame = 2
Query:   14 VDIYKFDPWDLPAKAAF----GEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIY 391
            +D+++ +P  LP  A        ++W+FF PR  +   G RP+R   SGYWKATG+   + +       + IG KK +VFY G+ P G KT W M+EY   +   N +      ++ S       LCR+Y
Sbjct:   42 LDVFEVEPSHLPNVAGVRCRGDAEQWFFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSKD----NKMIGAKKTMVFYTGKAPTGRKTKWKMNEYHAVDETVNASTIPKLRREFS-------LCRVY 160          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC61_ARATH (Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana GN=NAC061 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.365e-15
Identity = 47/125 (37.60%), Postives = 62/125 (49.60%), Query Frame = 2
Query:   14 VDIYKFDPWDLPAKAAFGEK------EWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDD 370
            +D++  +P  LP  A  GE+      +W FF PR  +   G RP+R   SGYWKATG+   + +         IGVKK +VFY G+ P G KT W M+EY+  E           PK  S R  D
Sbjct:   41 LDVFSVEPTQLPNLA--GERCRGDAEQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSPD----NRVIGVKKTMVFYTGKAPTGRKTKWKMNEYKAVETAS----VSTIPKSGSSRAFD 155          
BLAST of CB293887 vs. ExPASy Swiss-Prot
Match: NAC4_ARATH (NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 7.006e-15
Identity = 43/96 (44.79%), Postives = 58/96 (60.42%), Query Frame = 2
Query:   14 VDIYKFDPWDLPAKAAFGEKE--WYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEY 295
            VDI  F+PWDLP+K+    ++  WYFFS ++ KY  G +  R   SG+WK TG  K +       ++E IG K+ LVF K R   G KT+W+MHEY
Sbjct:   40 VDICSFEPWDLPSKSMIKSRDGVWYFFSVKEMKYNRGDQQRRRTNSGFWKKTG--KTMTVMRKRGNREKIGEKRVLVF-KNR--DGSKTDWVMHEY 130          
The following BLAST results are available for this feature:
BLAST of CB293887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
NAC42_ARATH5.904e-3034.21NAC domain-containing protein 42 OS=Arabidopsis th... [more]
NAC76_ORYSJ5.526e-2842.11NAC domain-containing protein 76 OS=Oryza sativa s... [more]
NAC7_ARATH7.217e-2844.70NAC domain-containing protein 7 OS=Arabidopsis tha... [more]
NAC78_ARATH4.678e-2743.42NAC domain-containing protein 78 OS=Arabidopsis th... [more]
NAC74_ORYSJ7.979e-2745.45NAC domain-containing protein 74 OS=Oryza sativa s... [more]
NAC66_ARATH2.322e-2641.01NAC domain-containing protein 66 OS=Arabidopsis th... [more]
NAC69_ARATH2.845e-1629.82NAC domain-containing protein 69 OS=Arabidopsis th... [more]
NAC90_ARATH1.844e-1533.85NAC domain-containing protein 90 OS=Arabidopsis th... [more]
NAC61_ARATH5.365e-1537.60Putative NAC domain-containing protein 61 OS=Arabi... [more]
NAC4_ARATH7.006e-1544.79NAC domain-containing protein 4 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06de03_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06de03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293887 ID=CB293887; Name=CB293887; organism=Citrus sinensis; type=EST; length=798bp
GCACTAGGCTGATGTTGATATTTACAAGTTTGATCCATGGGATTTACCAG
CCAAGGCTGCCTTCGGTGAGAAAGAGTGGTATTTTTTCAGTCCTAGAGAC
CGAAAGTACCCGAATGGAGCCAGGCCGAACAGGGCAGCTGCATCCGGGTA
TTGGAAGGCGACAGGCACGGATAAGATCATCTTGGCAACATCTGTGGGAG
CTCATCAAGAAAACATTGGTGTGAAGAAAGCTCTTGTGTTCTACAAAGGC
AGGCCTCCGAAGGGAGTTAAAACTAATTGGATTATGCATGAGTATCGCCT
TGCTGAAAACCCCAAGAATCTCAATCACACCAAGATGAGGCCCAAAGACT
CTTCCATGAGGTTGGATGATTGGGTTCTCTGCCGCATCTACCGCAAGTCC
CATGTCTCCCTGCCAACATCAGCCGGTGCAGCAAGTGATCATGATCTAGA
AGAAGAGGAGGAAAAATTTAACCTTCATGACACCCTGTTGCCGATCCTGA
GAAGTCCACCAAGCCACAACACTACTCTCAATCCTCAGAAATCTTCATCC
TTCTCCAACTTATTGGATGCAATGGACTACTCAATGCTGAGTAATTTTCT
ATCCGAGAACCAAACGAGTCATACCGGATCTGAATCCAACCCGCTGTTCA
ATTCAGGGATTTTAGAGCAGCACCATTCTTCATTCAACAATGGCAATGGC
AATGGCGCCAACACGAACACAAGTTGCACTAACAGTTTTCTGATTCAAAA
ACTACCTCAGTTGAACTATTCAGTTTTCAACAATATGGAGAACCAGCA
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