CB293897

Overview
NameCB293897
Unique NameCB293897
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1496 contig Csv1_Contig1496:31..778. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.325e-24
Identity = 71/194 (36.60%), Postives = 99/194 (51.03%), Query Frame = 3
Query:  186 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND----LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 743
            + L+KK   K Y S+ +   R  I++ NL++ +          H     +    D+T  E  +   GLR     P  +     L T +    +P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E         + GC GG M +AF+Y  + GG+  E+ YPY G D
Sbjct:   26 WELWKKTHGKQYNSKVDEISRRLIWEKNLKKISVHNLEASLGAHTYELAMNHLGDMTSEEVVQKMTGLRVP---PSRSFSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVSE---------NYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQD 207          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 3.325e-24
Identity = 71/194 (36.60%), Postives = 99/194 (51.03%), Query Frame = 3
Query:  186 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND----LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 743
            + L+KK   K Y S+ +   R  I++ NL++ +          H     +    D+T  E  +   GLR     P  +     L T +    +P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E         + GC GG M +AF+Y  + GG+  E+ YPY G D
Sbjct:   26 WELWKKTHQKQYNSKVDEISRRLIWEKNLKQISAHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLRIP---PSRSYSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTE---------NYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQD 207          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.325e-24
Identity = 70/192 (36.46%), Postives = 96/192 (50.00%), Query Frame = 3
Query:  183 HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 743
            H+ L+KK   K Y ++ +   R  I++ NL+  +          H     +    D+T  E  +   GL+  L   +  D   I       P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E D         GC GG M +AF+Y  K  G+  E+ YPY G +
Sbjct:   25 HWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQE 207          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.343e-24
Identity = 70/191 (36.65%), Postives = 95/191 (49.74%), Query Frame = 3
Query:  186 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 743
            + L+KK + K Y S+ +   R  I++ NL+  +          H     +    D+T  E  +   GL+      +  D   I       P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E D         GC GG M +AF+Y  K  G+  E+ YPY G D
Sbjct:   27 WELWKKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSHSRSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQD 208          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.672e-24
Identity = 70/191 (36.65%), Postives = 95/191 (49.74%), Query Frame = 3
Query:  186 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 743
            + L+KK + K Y S+ +   R  I++ NL+  +          H     +    D+T  E  +   GL+      +  D   I       P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E D         GC GG M +AF+Y  K  G+  E+ YPY G D
Sbjct:   27 WDLWKKTYRKQYNSKVDELSRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSHSRSNDTLYIPDWESRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQD 208          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 5.672e-24
Identity = 68/187 (36.36%), Postives = 95/187 (50.80%), Query Frame = 3
Query:  195 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVT----QFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 743
            +K K+ K+Y+ +EE  RR  +++ N+R      K +    +  T    +F D T  EFR++   +     +     Q  +  +  LP   DWRE+G V PV++QG CGSCW+F+  GA+EG  F  TG L  LS Q L+DC            + GC  G  + AFEY LK  GL  E  YPY G D
Sbjct:   32 WKTKYAKSYSPKEEALRR-AVWEENMRMIKLHNKENSLGKNNFTMKMNKFGDQTSEEFRKSIDNIPIPAAMTDPHAQNHV--SIGLPDYKDWREEGYVTPVRNQGKCGSCWAFAAAGAIEGQMFWKTGNLTPLSVQNLLDCSKTVG-------NKGCQSGTAHQAFEYVLKNKGLEAEATYPYEGKD 208          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 5.672e-24
Identity = 64/188 (34.04%), Postives = 95/188 (50.53%), Query Frame = 3
Query:  186 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAAR-RQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDL-----PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 731
            F  +  ++ + Y   +E   RF IFK N+        +   S T G+ QF+D+T  EF   Y GL     LP +  + P++  +D+     P   DWR+ GAV  VK+QG CGSCW+F++   +E    +  G LVSLSEQQ++DC          +   GC GG +N A+ + +   G+     YPY
Sbjct:   37 FEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIETFNNRNGNSYTLGINQFTDMTNNEFVAQYTGLS----LPLNIKREPVVSFDDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDC----------AVSYGCKGGWINKAYSFIISNKGVASAAIYPY 210          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CYSP_THEPA (Cysteine proteinase OS=Theileria parva GN=TP03_0285 PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 7.408e-24
Identity = 72/213 (33.80%), Postives = 100/213 (46.95%), Query Frame = 3
Query:  186 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEF-------------------------RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR 746
            F  F  K+N+ +A+Q+E   R   F++N     + QK D     G+ +FSDLT  EF                          +TYL  L++ L   +D D A +   N      DWR   +V  VKDQ +CG CW+FST G++EG       K   LS Q+L+DCD         S  +GC GGL+ SA+EY  K  GL+  +D P+    R
Sbjct:  125 FEEFNSKYNRRHATQQERLNRLVTFRSNYLEV-KEQKGDEPYVKGINRFSDLTEREFYKLFPVMKPPKATYSNGYYLLSHMANKTYLKNLKKALNTDEDVDLAKLTGEN-----LDWRRSSSVTSVKDQSNCGGCWAFSTVGSVEGYYMSHFDKSYELSVQELLDCD---------SFSNGCQGGLLESAYEYVRKY-GLVSAKDLPFVDKAR 321          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.408e-24
Identity = 70/192 (36.46%), Postives = 95/192 (49.48%), Query Frame = 3
Query:  183 HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 743
            H+ L+KK   K Y S+ +   R  I++ NL+  +          H     +    D+T  E  +   GL+      +  D   I       P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E D         GC GG M +AF+Y  K  G+  E+ YPY G +
Sbjct:   25 HWELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQE 207          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.408e-24
Identity = 70/192 (36.46%), Postives = 95/192 (49.48%), Query Frame = 3
Query:  183 HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 743
            H+ L+KK   K Y S+ +   R  I++ NL+  +          H     +    D+T  E  +   GL+      +  D   I       P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E D         GC GG M +AF+Y  K  G+  E+ YPY G +
Sbjct:   25 HWELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQE 207          
The following BLAST results are available for this feature:
BLAST of CB293897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
CATK_RAT3.325e-2436.60Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CATK_MOUSE3.325e-2436.60Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CATK_HUMAN3.325e-2436.46Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]
CATK_PIG4.343e-2436.65Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CATK_CANFA5.672e-2436.65Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CATJ_MOUSE5.672e-2436.36Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
ANAN_ANACO5.672e-2434.04Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
CYSP_THEPA7.408e-2433.80Cysteine proteinase OS=Theileria parva GN=TP03_028... [more]
CATK_MACMU7.408e-2436.46Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA7.408e-2436.46Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06de08_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06de08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293897 ID=CB293897; Name=CB293897; organism=Citrus sinensis; type=EST; length=748bp
GCACTAGGATGGGATCTAAAACAGTAGTTTTCTTTCTGGTCTCTCTCGTC
GTCGTCTCCGCCGTTTCATCAGGGACGTTGATCGACGATGTTGATCAGCT
GATCAGGCAAGTAACGGACGGCGGTGACGAGATCCTAAGCCACCACGAGA
GCACCAACAACGACCTCTTGGGCGCAGAGCACCACTTCTCCCTATTCAAG
AAGAAGTTCAATAAAGCGTACGCTTCGCAGGAGGAGCACGACCGTAGGTT
CACTATTTTCAAGGCCAACTTGCGACGCGCCGCGCGTCGCCAGAAGCTCG
ACCCGAGCGCCACCCACGGCGTCACTCAGTTCTCCGACTTGACTCCGGCC
GAGTTCCGCCGGACGTACCTTGGCCTCAGGAGGAAGCTGAGGCTGCCTAA
GGATGCGGATCAGGCGCCGATCTTGCCTACGAATGATTTGCCGGCGGATT
TTGATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTTAAAGATCAGGGTTCA
TGCGGATCATGCTGGAGTTTCAGTACAACAGGGGCCTTGGAAGGTGCTAA
CTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTGAGCAACAGCTTGTGG
ATTGCGATCATGAGTGTGATCCTGAGGAACCAGGTTCTTGTGATTCTGGA
TGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTACACACTCAAGGCTGG
TGGGCTTATGCGGGAGGAAGACTATCCTTACACCGGCACTGATCGTGG
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