CB293897

Overview
NameCB293897
Unique NameCB293897
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1496 contig Csv1_Contig1496:31..778. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.544e-34
Identity = 83/186 (44.62%), Postives = 108/186 (58.06%), Query Frame = 3
Query:  186 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDP-SATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG 737
            F  F   +N+ Y S+EE   R T+F  N+ RA + Q LD  +A +G+T+FSDLT  EF   YL     L+       +P    NDL P ++DWR+KGAV  VK+QG CGSCW+FS TG +EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+DY Y G
Sbjct:  165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEFHTIYLN--PLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCD---------KVDKACLGGLPSNAYAAIKNLGGLETEDDYGYQG 339          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.629e-34
Identity = 80/203 (39.41%), Postives = 110/203 (54.19%), Query Frame = 3
Query:  162 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKL--RLPKDADQ--------APILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGT 740
            D+  A+H+F  F   +NK Y   +  + RF IFK NL     + KL+ SA + + +FSDL+  E    Y GL  K    + +            AP    ++LP +FDWR    +  VKDQG+CGSCW+ +  G LE    +    L++LSEQQL+DCD         S +  C+GGLM++AFE  + AGGLM E DYPY GT
Sbjct:   24 DIHDAQHYFETFIINYNKQYPDTKTKNYRFKIFKQNLEDINEKNKLNDSAIYNINKFSDLSKNELLTKYTGLTSKKPSNMVRSTSNFCNVIHLDAPPDVHDELPQNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCD---------SANMACDGGLMHTAFEQLMNAGGLMEEIDYPYQGT 217          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 6.046e-34
Identity = 75/173 (43.35%), Postives = 103/173 (59.54%), Query Frame = 3
Query:  234 EHDRRFTIFKANLRRA-ARRQKLDPSATH--GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 743
            EH+RRF +F  NL+   A   + D       G+ +F+DLT  EFR T+LG +   R     ++       +LP   DWREKGAV PVK+QG CGSCW+FS    +E  N L TG++++LSEQ+LV+C            +SGCNGGLM+ AF++ +K GG+  E+DYPY   D
Sbjct:   70 EHERRFLVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNEEFRATFLGAKVAERSRAAGERYRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVEC-------STNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVD 235          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.046e-34
Identity = 77/191 (40.31%), Postives = 109/191 (57.07%), Query Frame = 3
Query:  162 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 731
            DLL A  +F  F  KFNK Y+S+ E  RRF IF+ NL     + + D SA + + +FSDL+  E    Y GL   L+     +   +  P +  P +FDWR    V  VK+QG CG+CW+F+T G+LE    +   +L++LSEQQL+DCD           D GC+GGL+++A+E  +  GG+  E DYPY
Sbjct:   20 DLLKAPSYFEEFLHKFNKNYSSESEKLRRFKIFQHNLEEIINKNQNDTSAQYEINKFSDLSKDETISKYTGLSLPLQKQNFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDF---------VDVGCDGGLLHTAYEAVMNMGGIQAENDYPY 201          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 7.896e-34
Identity = 83/199 (41.71%), Postives = 110/199 (55.28%), Query Frame = 3
Query:  156 NNDLLGAEHHFSLFKK--KFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLR----RKLR-LPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 731
            + DL   E  + L+++    +    S  E  +RF +FKANL       K+D      + +F+D+T  EFR TY G +    R  R  P +           +P   DWR+KGAV  VKDQG CGSCW+FST  A+EG N + T KLV+LSEQ+LVDCD E         + GCNGGLM SAFE+  + GG+  E +YPY
Sbjct:   27 DKDLASEESLWDLYERWRSHHTVSRSLGEKHKRFNVFKANLMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHPRMFRGTPHENGAFMYEKVVSVPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVDCDKE--------ENQGCNGGLMESAFEFIKQKGGITTESNYPY 217          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.896e-34
Identity = 84/191 (43.98%), Postives = 101/191 (52.88%), Query Frame = 3
Query:  195 FKKKFNKAYASQEEHDRRFTIFKANLR----RAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLR----LPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 743
            FK KF K YA+ EE   R ++F   L+       R  K + +    +  FSDLT  E   T  G+ R+      LPK A      PT  + AD DWR KGAV PVKDQG CGSCW+FS   ALEGA+FL TG LVSLSEQ LVDC            + GCNGG    A++Y +   G+  E  YPY   D
Sbjct:   23 FKTKFGKKYANSEEESHRMSVFMDKLKFIQEHNERYDKGEVTYWLKINNFSDLTHEEVLATKTGMTRRRHPLSVLPKSA------PTTPMAADVDWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCSSSYG-------NQGCNGGWPYQAYQYIIANRGIDTESSYPYKAID 200          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.031e-33
Identity = 74/191 (38.74%), Postives = 110/191 (57.59%), Query Frame = 3
Query:  162 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 731
            D+L A ++F  F  KFNK+Y+S+ E  RRF IF+ NL     +   D +A + + +F+DL+  E    Y GL   L+     +   +  P +  P +FDWR    V  VK+QG CG+CW+F+T G+LE    +   + ++LSEQQL+DCD           D+GC+GGL+++AFE  +  GG+  E DYPY
Sbjct:   20 DVLKAPNYFEDFLHKFNKSYSSESEKLRRFQIFRHNLEEIINKNHNDSTAQYEINKFADLSKDETISKYTGLSLPLQTQNFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNQFINLSEQQLIDCDF---------VDAGCDGGLLHTAFEAVMNMGGIQAESDYPY 201          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 1.031e-33
Identity = 80/187 (42.78%), Postives = 103/187 (55.08%), Query Frame = 3
Query:  195 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQ----FSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 743
            +K    + Y + EE  RR  +++ N+R          +  HG T     F D+T  EFR+   G R +        Q P++    +P   DWREKG V PVK+QG CGSCW+FS +G LEG  FL TGKL+SLSEQ LVDC H+         + GCNGGLM+ AF+Y  + GGL  EE YPY   D
Sbjct:   32 WKSTHRRLYGTNEEEWRR-AVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKGRLFQEPLML--QIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHD-------QGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKD 208          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.759e-33
Identity = 91/217 (41.94%), Postives = 112/217 (51.61%), Query Frame = 3
Query:  102 IRQVTDGGDEILSHHESTNNDLLGAEHH---FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 743
            IR VTD     L   ES     LG   H   F+ F  ++ K+Y S  E  RRF IF  +L       +       G+ +FSD++  EF+ T LG  +        +   +     LP   DWRE G V PVK+Q  CGSCW+FSTTGALE A   ATGK +SLSEQQLVDC         G  + GCNGGL + AFEY    GG+  EE YPY G +
Sbjct:   33 IRPVTDRAASTL---ESAVLGALGRTRHALRFARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKGLPYRLGINRFSDMSWEEFQATRLGAAQTCSATLAGNHL-MRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDC-------AGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVN 238          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.297e-33
Identity = 82/181 (45.30%), Postives = 111/181 (61.33%), Query Frame = 3
Query:  213 KAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH--GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGP-VKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 743
            K Y    E +RRF IFK NL+R       DP+ ++  G+ +FSDLT  EF+ +YLG + + +   D  +       D LP + DWRE+GAV P VK QG CGSCW+F+ TGA+EG N + TG+LVSLSEQ+L+DCD        G+ + GC GG    AFE+  + GG++ +E Y YTG D
Sbjct:   50 KNYNGLGEKERRFKIFKDNLKRIEEHNS-DPNRSYERGLNKFSDLTADEFQASYLGGKMEKKSLSDVAERYQYKEGDVLPDEVDWRERGAVVPRVKRQGECGSCWAFAATGAVEGINQITTGELVSLSEQELIDCDR-------GNDNFGCAGGGAVWAFEFIKENGGIVSDEVYGYTGED 222          
The following BLAST results are available for this feature:
BLAST of CB293897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
CATF_MOUSE3.544e-3444.62Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
CATV_NPVAH4.629e-3439.41Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
ORYB_ORYSJ6.046e-3443.35Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CATV_NPVAP6.046e-3440.31Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
CYSEP_PHAVU7.896e-3441.71Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CRUST_PANBO7.896e-3443.98Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CATV_NPVCF1.031e-3338.74Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CATL1_RAT1.031e-3342.78Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
ALEU_HORVU1.759e-3341.94Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CPR2_ARATH2.297e-3345.30Probable cysteine proteinase At3g43960 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06de08_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06de08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293897 ID=CB293897; Name=CB293897; organism=Citrus sinensis; type=EST; length=748bp
GCACTAGGATGGGATCTAAAACAGTAGTTTTCTTTCTGGTCTCTCTCGTC
GTCGTCTCCGCCGTTTCATCAGGGACGTTGATCGACGATGTTGATCAGCT
GATCAGGCAAGTAACGGACGGCGGTGACGAGATCCTAAGCCACCACGAGA
GCACCAACAACGACCTCTTGGGCGCAGAGCACCACTTCTCCCTATTCAAG
AAGAAGTTCAATAAAGCGTACGCTTCGCAGGAGGAGCACGACCGTAGGTT
CACTATTTTCAAGGCCAACTTGCGACGCGCCGCGCGTCGCCAGAAGCTCG
ACCCGAGCGCCACCCACGGCGTCACTCAGTTCTCCGACTTGACTCCGGCC
GAGTTCCGCCGGACGTACCTTGGCCTCAGGAGGAAGCTGAGGCTGCCTAA
GGATGCGGATCAGGCGCCGATCTTGCCTACGAATGATTTGCCGGCGGATT
TTGATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTTAAAGATCAGGGTTCA
TGCGGATCATGCTGGAGTTTCAGTACAACAGGGGCCTTGGAAGGTGCTAA
CTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTGAGCAACAGCTTGTGG
ATTGCGATCATGAGTGTGATCCTGAGGAACCAGGTTCTTGTGATTCTGGA
TGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTACACACTCAAGGCTGG
TGGGCTTATGCGGGAGGAAGACTATCCTTACACCGGCACTGATCGTGG
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