CB293897

Overview
NameCB293897
Unique NameCB293897
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1496 contig Csv1_Contig1496:31..778. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 2.540e-32
Identity = 79/178 (44.38%), Postives = 100/178 (56.18%), Query Frame = 3
Query:  210 NKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRL----PKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 731
            NKAY + +E   R+  FK N+               G+ Q +DL+  E+R  YLG R  ++L     ++       P    P + DWREK AV PVKDQG CGSC+SFSTTG++EG   + TGKLVSLSEQ ++DC      E       GCNGGLM +AFEY +K  GL  EE YPY
Sbjct:   42 NKAY-THKEFMPRYEEFKKNMDYVHNWNSKGSKTVLGLNQHADLSNEEYRLNYLGTRAHIKLNGYHKRNLGLRLNRPQFKQPLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDCSSSFGNE-------GCNGGLMTNAFEYIIKNNGLNSEEQYPY 211          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.317e-32
Identity = 91/217 (41.94%), Postives = 111/217 (51.15%), Query Frame = 3
Query:  102 IRQVTDGGDEILSHHESTNNDLLGAEH---HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 743
            IR VTD     L   EST    LG       F+ F  +  K Y    E  RRF IF  +L       +       G+ +F+D++  EF+ + LG  +       A    +     LP   DWRE G V PVKDQG CGSCW+FSTTG+LE A   ATGK VSLSEQQLVDC    +       + GC+GGL + AFEY    GGL  EE YPYTG +
Sbjct:   34 IRSVTDHAASAL---ESTVIAALGRTRDALRFARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRRGLPYRLGINRFADMSWEEFQASRLGAAQNCSATL-AGNHRMRDAAALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYN-------NFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVN 239          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CYSP7_DICDI (Cysteine proteinase 7 OS=Dictyostelium discoideum GN=cprG PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.317e-32
Identity = 78/183 (42.62%), Postives = 101/183 (55.19%), Query Frame = 3
Query:  210 NKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTN---DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGK--LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 743
            ++ + S EE + R+ IFKAN+               G+  F+D++  E+R TYLG       P DA    +  ++   D  A  DWR +GAV P+K+QG CG CWSFSTTGA EGA +LA GK  LVSLSEQ L+DC            ++GC GGLM  AFEY +   G+  E  YPYT  D
Sbjct:   37 HQRHYSSEEFNGRYNIFKANMDYVNEWNTKGSETVLGLNVFADISNEEYRATYLGT------PFDASSLEMTESDKIFDASAQVDWRTQGAVTPIKNQGQCGGCWSFSTTGATEGAQYLANGKKNLVSLSEQNLIDCSGSYG-------NNGCEGGLMTLAFEYIINNKGIDTESSYPYTAED 206          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.317e-32
Identity = 84/184 (45.65%), Postives = 101/184 (54.89%), Query Frame = 3
Query:  186 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG 737
            F+ F  +  K Y S EE  +RF IF  NL+      +   S   G+ +F+DLT  EFR+  LG  +        +    L    LP   DWR+ G V PVK QG CGSCW+FSTTGALE A   A GK +SLSEQQLVDC    +       + GCNGGL + AFEY    GGL  EE YPYTG
Sbjct:   57 FARFAIRHRKRYDSVEEIKQRFEIFLDNLKMIRSHNRKGLSYKLGINEFTDLTWDEFRKHKLGASQNCSATTKGNLK--LTNVVLPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFN-------NFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTG 231          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.317e-32
Identity = 76/191 (39.79%), Postives = 108/191 (56.54%), Query Frame = 3
Query:  162 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 731
            DLL A ++F  F  +FNK Y S+ E  RRF IF+ NL     + + D SA + + +FSDL+  E    Y GL   ++         +  P    P +FDWR    V  VK+QG CG+CW+F+T  +LE    +   +L++LSEQQ++DCD           D+GCNGGL+++AFE  +K GG+  E DYPY
Sbjct:   20 DLLKAPNYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIINKNQND-SAKYEINKFSDLSKDETIAKYTGLSLPIQTQNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPY 200          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.317e-32
Identity = 81/193 (41.97%), Postives = 104/193 (53.89%), Query Frame = 3
Query:  177 EHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQ----FSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 743
            E  ++ +K   N+ Y   EE  RR  +++ N++      +      H  T     F D+T  EFR+   G + +        Q P+    + P   DWREKG V PVK+QG CGSCW+FS TGALEG  F  TGKLVSLSEQ LVDC     P+     + GCNGGLM+ AF+Y    GGL  EE YPY  T+
Sbjct:   26 EAQWTKWKAMHNRLYGMNEEGWRR-AVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLF--YEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCS---GPQG----NEGCNGGLMDYAFQYVADNGGLDSEESYPYEATE 208          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.659e-32
Identity = 79/185 (42.70%), Postives = 102/185 (55.14%), Query Frame = 3
Query:  186 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMREEDYPY 731
            F+ FK+K  + Y S  E   R ++F+ NL  A      +P AT GVT FSDLT  EFR  Y          ++  + P+ +     PA  DWR +GAV  VKDQG CGSCW+FS  G +E   FLA   L +LSEQ LV CD           DSGC+GGLMN+AFE+ ++   G +  E+ YPY
Sbjct:   38 FAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHNGAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCD---------KTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPY 213          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.659e-32
Identity = 76/204 (37.25%), Postives = 115/204 (56.37%), Query Frame = 3
Query:  147 ESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRR--AARRQKLD-PSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR 746
            E    +L  A  +F  F + +NK Y S  E ++R++IFK NL    A      D P+AT+ + +FSDL+ +E    + GL    R+        +  P +  P  FDWRE+  V  +K+QG+CG+CW+F+T  ++E    +   +L+ LSEQQL+DCD         S D GCNGGL+++AFE  ++ GG+  E DYP+ G +R
Sbjct:   43 EGAAYNLQRAPDYFESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYKINKFSDLSKSELIAKFTGLSIPERVSNFCKTIILNQPPDKGPLHFDWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCD---------SVDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVGRNR 237          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.390e-32
Identity = 76/191 (39.79%), Postives = 108/191 (56.54%), Query Frame = 3
Query:  162 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 731
            DLL A ++F  F  +FNK Y S+ E  RRF IF+ NL     + + D SA + + +FSDL+  E    Y GL   ++         +  P    P +FDWR    V  VK+QG CG+CW+F+T  +LE    +   +L++LSEQQ++DCD           D+GCNGGL+++AFE  +K GG+  E DYPY
Sbjct:   20 DLLKAPNYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIIIKNQND-SAKYEINKFSDLSKDETIAKYTGLSLPIQTQNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPY 200          
BLAST of CB293897 vs. ExPASy Swiss-Prot
Match: CATV_NPVBM (Viral cathepsin OS=Bombyx mori nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.390e-32
Identity = 77/196 (39.29%), Postives = 110/196 (56.12%), Query Frame = 3
Query:  147 ESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 731
            +S   D L A ++F  F  +FNK Y+S+ E  RRF IF+ NL     + + D SA + + +FSDL+  E    Y GL    +         +  P    P +FDWR    V  VK+QG CG+CW+F+T G+LE    +   +L++LSEQQ++DCD           D+GCNGGL+++AFE  +K GG+  E DYPY
Sbjct:   15 KSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQND-SAKYEINKFSDLSKDETIAKYTGLSLPTQTQNFCKVILLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPY 200          
The following BLAST results are available for this feature:
BLAST of CB293897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
CYSP3_DICDI2.540e-3244.38Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
ORYC_ORYSJ3.317e-3241.94Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CYSP7_DICDI3.317e-3242.62Cysteine proteinase 7 OS=Dictyostelium discoideum ... [more]
CYSP3_SOLLC3.317e-3245.65Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CATV_NPVAC3.317e-3239.79Viral cathepsin OS=Autographa californica nuclear ... [more]
CATL1_CERAE3.317e-3241.97Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CYSP_TRYCR5.659e-3242.70Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CATV_NPVLD5.659e-3237.25Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATV_NPVRO7.390e-3239.79Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
CATV_NPVBM7.390e-3239.29Viral cathepsin OS=Bombyx mori nuclear polyhedrosi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06de08_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06de08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293897 ID=CB293897; Name=CB293897; organism=Citrus sinensis; type=EST; length=748bp
GCACTAGGATGGGATCTAAAACAGTAGTTTTCTTTCTGGTCTCTCTCGTC
GTCGTCTCCGCCGTTTCATCAGGGACGTTGATCGACGATGTTGATCAGCT
GATCAGGCAAGTAACGGACGGCGGTGACGAGATCCTAAGCCACCACGAGA
GCACCAACAACGACCTCTTGGGCGCAGAGCACCACTTCTCCCTATTCAAG
AAGAAGTTCAATAAAGCGTACGCTTCGCAGGAGGAGCACGACCGTAGGTT
CACTATTTTCAAGGCCAACTTGCGACGCGCCGCGCGTCGCCAGAAGCTCG
ACCCGAGCGCCACCCACGGCGTCACTCAGTTCTCCGACTTGACTCCGGCC
GAGTTCCGCCGGACGTACCTTGGCCTCAGGAGGAAGCTGAGGCTGCCTAA
GGATGCGGATCAGGCGCCGATCTTGCCTACGAATGATTTGCCGGCGGATT
TTGATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTTAAAGATCAGGGTTCA
TGCGGATCATGCTGGAGTTTCAGTACAACAGGGGCCTTGGAAGGTGCTAA
CTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTGAGCAACAGCTTGTGG
ATTGCGATCATGAGTGTGATCCTGAGGAACCAGGTTCTTGTGATTCTGGA
TGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTACACACTCAAGGCTGG
TGGGCTTATGCGGGAGGAAGACTATCCTTACACCGGCACTGATCGTGG
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