CB293923

Overview
NameCB293923
Unique NameCB293923
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length784
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293923 vs. ExPASy Swiss-Prot
Match: CATA_BACFR (Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.516e-22
Identity = 70/196 (35.71%), Postives = 99/196 (50.51%), Query Frame = -1
Query:  221 QPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQC*IFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSR-YDPTRHGERYPIPSDVIPGRREKACIVKENN-------FKQPGERFRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVFYWSQADRSLGQKVASGLNV 784
            Q VG L LN+N +N+FAE E  AFNP  +V GI +S DKMLQ  +F+YGD QR+RLG N   +PVN P+CP    H DG M       + +Y  ++ Y+P  +GE    P    P  +    +   N        + QPG+ FR    D Q+       +A+ D  +  + R +   Y  +AD + G  VA  L +
Sbjct:  290 QDVGILELNRNPENYFAEVEQSAFNPMNIVEGIGFSPDKMLQGRLFSYGDAQRYRLGVNSEQIPVNKPRCPFHAFHRDGAMRV-----DGNYGSAKGYEPNSYGEWQDSPEKKEPPLKVHGDVFNYNEREYDDDYYSQPGDLFRLMPADEQQLLFENTARAMGDAELFIKQRHVRNCY--KADPAYGTGVAQALGI 478          
BLAST of CB293923 vs. ExPASy Swiss-Prot
Match: CATA_METBF (Catalase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=kat PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.410e-22
Identity = 69/190 (36.32%), Postives = 100/190 (52.63%), Query Frame = -1
Query:  221 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQC*IFAYGDTQRHRLGPNYLMLPVNAPK-CPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHGERYPIPSDVIPGRREKACIVKEN-NFKQPGERFRSWAPD-RQERFLNRWIKALCDPRVTHEVRSIWVFYWSQADRSLGQKVASGLNV 778
            +G+LVLN+N  N+FAE E  AF+P  +VPGI  S DKMLQ  +F+Y DT  HRLGPNY ++PVNAPK  P  +   DGFM    +     +Y+P+ +        Y  P   + G   +      N +F Q G  +R    D  +E  +   +  L   +   ++R   +F+  +ADR  G +VA GL +
Sbjct:  296 IGKLVLNRNPTNYFAEVEQAAFSPANLVPGIGISPDKMLQGRVFSYHDTHIHRLGPNYNLIPVNAPKYSPENSYQRDGFMRVDANGGSGPNYWPNSFGGPSPDSVYLEPPFGVSGLAARTLYTHPNDDFVQAGNLYRDVMTDYDRENLVGNIVSHLSAAQKRIQLRQTALFF--KADRDYGSRVAKGLEL 483          
BLAST of CB293923 vs. ExPASy Swiss-Prot
Match: CATA_BORPE (Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.522e-22
Identity = 66/190 (34.74%), Postives = 101/190 (53.16%), Query Frame = -1
Query:  218 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQC*IFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHGERYPIPSDVIPGRREKAC--IVKENNFKQPGERFRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVFYWSQADRSLGQKVASGLNVR 778
            VG L LNKN +N+FAE E  AF P  VVPGI +S DKMLQ  +F+YGDT R+RLG N+  +PVNAP+CP  + H DG      +    ++Y P+ +   R  +    P   + G+        V E+ + QPG  FR    D++++      + +    V  E++   + ++ +AD +    VA  L ++
Sbjct:  295 VGVLELNKNPENYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDTHRYRLGINHHQIPVNAPRCPFHSFHRDGMGRVDGNGGATLNYEPNSFGEWREAKHAAEPPLALDGQAADRWNHRVDEDYYSQPGALFRLMNDDQKQQLFGNIGRHMAG--VPEEIQRRQLEHFRRADPAYAAGVAKALGLK 482          
BLAST of CB293923 vs. ExPASy Swiss-Prot
Match: CATA_BORPA (Catalase OS=Bordetella parapertussis GN=katA PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.522e-22
Identity = 66/190 (34.74%), Postives = 101/190 (53.16%), Query Frame = -1
Query:  218 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQC*IFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHGERYPIPSDVIPGRREKAC--IVKENNFKQPGERFRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVFYWSQADRSLGQKVASGLNVR 778
            VG L LNKN +N+FAE E  AF P  VVPGI +S DKMLQ  +F+YGDT R+RLG N+  +PVNAP+CP  + H DG      +    ++Y P+ +   R  +    P   + G+        V E+ + QPG  FR    D++++      + +    V  E++   + ++ +AD +    VA  L ++
Sbjct:  295 VGVLELNKNPENYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDTHRYRLGINHHQIPVNAPRCPFHSFHRDGMGRVDGNGGATLNYEPNSFGEWREAKHAAEPPLALDGQAADRWNHRVDEDYYSQPGALFRLMNDDQKQQLFGNIGRHMAG--VPEEIQRRQLEHFRRADPAYAAGVAKALGLK 482          
BLAST of CB293923 vs. ExPASy Swiss-Prot
Match: CATA_BORBR (Catalase OS=Bordetella bronchiseptica GN=katA PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.522e-22
Identity = 66/190 (34.74%), Postives = 101/190 (53.16%), Query Frame = -1
Query:  218 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQC*IFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHGERYPIPSDVIPGRREKAC--IVKENNFKQPGERFRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVFYWSQADRSLGQKVASGLNVR 778
            VG L LNKN +N+FAE E  AF P  VVPGI +S DKMLQ  +F+YGDT R+RLG N+  +PVNAP+CP  + H DG      +    ++Y P+ +   R  +    P   + G+        V E+ + QPG  FR    D++++      + +    V  E++   + ++ +AD +    VA  L ++
Sbjct:  295 VGVLELNKNPENYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDTHRYRLGINHHQIPVNAPRCPFHSFHRDGMGRVDGNGGATLNYEPNSFGEWREAKHAAEPPLALDGQAADRWNHRVDEDYYSQPGALFRLMNDDQKQQLFGNIGRHMAG--VPEEIQRRQLEHFRRADPAYAAGVAKALGLK 482          
BLAST of CB293923 vs. ExPASy Swiss-Prot
Match: CATA_VIBF1 (Catalase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=katA PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.283e-21
Identity = 72/195 (36.92%), Postives = 98/195 (50.26%), Query Frame = -1
Query:  221 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQC*IFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVD-YFPSR--YDPTRHGERYPIPSDVIPGRREKACIV------KENNFKQPGERFRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVFYWSQADRSLGQKVASGLNV 778
            VG   LN+N  NFFAE E  AFNP  VVPGI +S DKMLQ  +FAYGD QR+RLG N+  +PVNAP+CP  + H DG M        VD  F S   Y+P   G+    P    P                E+ F QPG+ FR    ++Q    +   + L    V  E++   + +  +AD + G+ +   L++
Sbjct:  291 VGEFELNRNPQNFFAEVEQSAFNPANVVPGISFSPDKMLQGRLFAYGDAQRYRLGVNHQHIPVNAPRCPVHSYHRDGAM-------RVDGNFGSTLGYEPNNEGQWAEQPDFAEPALNLDGAAAHWDHREDEDYFSQPGDLFRLMTAEQQAILFDNTARNL--NGVPKEIQLRHLRHCYKADPAYGEGIGKLLDI 476          
BLAST of CB293923 vs. ExPASy Swiss-Prot
Match: CATE_ECOLI (Catalase HPII OS=Escherichia coli (strain K12) GN=katE PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.859e-21
Identity = 52/108 (48.15%), Postives = 72/108 (66.67%), Query Frame = -1
Query:  464 QPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQC*IFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHGERYP 784
            Q VG++VLN+N DNFFAENE  AF+PG +VPG+ ++ND +LQ  +F+Y DTQ  RL GPN+  +P+N P CP+ N   DG    MHR   +D  P+ Y+P    + +P
Sbjct:  368 QRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDG----MHR-MGIDTNPANYEPNSINDNWP 470          
BLAST of CB293923 vs. ExPASy Swiss-Prot
Match: CATA_HELPY (Catalase OS=Helicobacter pylori GN=katA PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 4.876e-21
Identity = 69/193 (35.75%), Postives = 101/193 (52.33%), Query Frame = -1
Query:  227 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQC*IFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHGERYPIPSDVIPGRREKACIV--------KENNFKQPGERFRSWAPDRQERFLNRWIKALCDPRVTH-EVRSIWVFYWSQADRSLGQKVASGL 778
            VG + LNKN +N+FAE E  AF+P  VVPGI YS D+MLQ  +F+YGDT R+RLG NY  +PVN P+CP  ++  DG+M   +     +Y PS     +  +    P   +    EK   V          + + QPG+ +RS   D +ER  +   ++L    VTH E+    + ++ +AD    + V   L
Sbjct:  294 VGIVELNKNPENYFAEVEQAAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDPKFNL-AHIEKEFEVWNWDYRADDSDYYTQPGDYYRSLPADEKERLHDTIGESLA--HVTHKEIVDKQLEHFKKADPKYAEGVKKAL 483          
BLAST of CB293923 vs. ExPASy Swiss-Prot
Match: CATA_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.368e-21
Identity = 64/190 (33.68%), Postives = 100/190 (52.63%), Query Frame = -1
Query:  218 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQC*IFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF--MHRDEEVDYFPSRYDPTRHGERYPIPSDVIPGRREK-ACIVKENNFKQPGERFRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVFYWSQADRSLGQKVASGLNVR 778
            VG   LN+N DN+FAE E  AF P  VVPGI +S DKMLQ  +F+YGD  R+RLG N+  +PVNA +CPH+  H DG M     +  + V Y P+ ++  +    +  P   + G  +     V ++ + QP   F  +  ++++R      + + D     + R I +F   + D + G+ VA  L ++
Sbjct:  293 VGFFELNRNPDNYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAARCPHQVYHRDGGMRVDGNNAHQRVTYEPNSFNQWQEQPDFSEPPLSLEGAADHWNHRVDDDYYSQPAALFHLFTDEQKQRLFANIAEDIRDVPEQIQRRQIGLFL--KVDPAYGKGVADALGLK 480          
BLAST of CB293923 vs. ExPASy Swiss-Prot
Match: CATA_STAES (Catalase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=katA PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.317e-21
Identity = 68/198 (34.34%), Postives = 102/198 (51.52%), Query Frame = -1
Query:  221 VGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQC*IFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPSR---YDPTRHGERYPIPSDVIPGRREKACIVKENNFKQPGERFRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVFYWSQADRSLGQKVASGLNV 778
            VG   LN+N +N+F + E  AF P  +VPG+ YS DKMLQ  +F+YGD QR+RLG N+  +PVN PK       CP      DG M F+  ++     Y+P+    Y+     ++ P P+D   G         +N F+QPG+ FR  + D +ER       A+    V+ +V+   + +  +AD   G+ VA  L +
Sbjct:  294 VGEFELNRNPENYFLDVEQAAFTPTNIVPGLDYSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGVENLCPFSR---DGQMRFLDNNQGGGPHYYPNNQGIYESQPEHKKPPFPTDG-DGYEYNYRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAM--DGVSKDVKVRHIRHCYKADPEYGKGVAKALGI 485          
The following BLAST results are available for this feature:
BLAST of CB293923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
CATA_BACFR1.516e-2235.71Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1[more]
CATA_METBF4.410e-2236.32Catalase OS=Methanosarcina barkeri (strain Fusaro ... [more]
CATA_BORPE7.522e-2234.74Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1[more]
CATA_BORPA7.522e-2234.74Catalase OS=Bordetella parapertussis GN=katA PE=3 ... [more]
CATA_BORBR7.522e-2234.74Catalase OS=Bordetella bronchiseptica GN=katA PE=3... [more]
CATA_VIBF11.283e-2136.92Catalase OS=Vibrio fischeri (strain ATCC 700601 / ... [more]
CATE_ECOLI2.859e-2148.15Catalase HPII OS=Escherichia coli (strain K12) GN=... [more]
CATA_HELPY4.876e-2135.75Catalase OS=Helicobacter pylori GN=katA PE=1 SV=2[more]
CATA_PSEAE6.368e-2133.68Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV... [more]
CATA_STAES8.317e-2134.34Catalase OS=Staphylococcus epidermidis (strain ATC... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06df10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06df10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293923 ID=CB293923; Name=CB293923; organism=Citrus sinensis; type=EST; length=784bp
TTATTTTTTTTTTTAAAAAACAGACTTTTATTAATTGAAACAACCTTAAA
AAAGTCCCATAACATGCAAGTTTATTTTCTATATCTACAATATACAACAG
CAAACATAGGATCGAAATTCTTCACATAGCTGCACCCTTGGTGTTCACTC
CTTGCTCACTCTTGGCAAGTCAAAAGCATCCAGTGTTCCAGTTCAAGTGA
CACCTTCAAATGCTTGGCCTCACATTGAGACCAGAAGCTACCTTCTGACC
CAGAGATCTGTCGGCCTGAGACCAATAAAAGACCCATATGCTGCGAACCT
CATGGGTGACACGAGGGTCACATAAAGCCTTAATCCATCGATTAAGGAAC
CTCTCTTGCCTGTCTGGGGCCCAGGATCGGAATCTCTCTCCAGGCTGCTT
GAAGTTGTTTTCCTTCACAATGCAAGCCTTCTCACGCCTTCCTGGAATTA
CATCAGAAGGAATGGGATATCTCTCACCATGACGAGTAGGATCATACCTC
GAAGGAAAGTAATCGACCTCCTCATCCCTGTGCATGAAATTCATGAAACC
ATCATAATGATTGTTGCGATGAGGACATTTGGGTGCATTAACTGGAAGCA
TCAAGTAGTTGGGGCCAAGGCGATGCCTCTGGGTATCACCATAGGCAAAG
ATTCAACATTGGAGCATCTTATCATTTGAGTAGTAGATCCCAGGAACCAC
GATACCAGGGTTAAATGCAAGCATTTCATTTTCCGCAAAGAAATTATCGA
TGTTCTTGTTCAAAACCAAGCGTCCAACTGGCTG
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