CB293960
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293960 vs. ExPASy Swiss-Prot
Match: PPR44_ARATH (Pentatricopeptide repeat-containing protein At1g15480, mitochondrial OS=Arabidopsis thaliana GN=At1g15480 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 8.873e-14 Identity = 49/185 (26.49%), Postives = 92/185 (49.73%), Query Frame = 3 Query: 171 LGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM-ESRKIHFSYTDFAVYLDLTAKTKGIAAAEEYFNGLSEYAKNRYTYGALLNCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERV 722 + +G SV AL+ ++ +GK + E + LRK + AL++ EW+ E+++ D+A LDL +K +G E Y + E + Y LL + A A+F KM +L F +T N + +Y R+ + +K+ ++ +++ N+ + TY + + + NDI G+E++ Sbjct: 135 VSVSGLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDYACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGFPLSTFTCNQMLILYKRVDK-KKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQI 318
BLAST of CB293960 vs. ExPASy Swiss-Prot
Match: PP234_ARATH (Pentatricopeptide repeat-containing protein At3g15590, mitochondrial OS=Arabidopsis thaliana GN=At3g15590 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.582e-13 Identity = 56/202 (27.72%), Postives = 95/202 (47.03%), Query Frame = 3 Query: 123 PFPTGNEDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWM-ESRKIHFSYTDFAVYLDLTAKTKGIAAAEEYFNGLSEYAKNRYTYGALL-NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERV 722 P + +LY+ + A SV L ++ EGK + + + + +LRK Y L++ EW+ + + F+ ++A LDL AK + AE + + E ++ Y LL NC K +A +F KM ELKF + A N L +Y + +K+ ++ M++ NI TY + S DI G+E++ Sbjct: 138 PTKKRGQSELYESIVAYK----SVKHVLEKWVKEGKDLSQAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQLDLVAKVHSLQKAEIFLKDIPESSRGEVVYRTLLANCVLKH-HVNKAEDIFNKMKELKFPTSVFACNQLLLLY-SMHDRKKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKI 333
BLAST of CB293960 vs. ExPASy Swiss-Prot
Match: PP135_ARATH (Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana GN=At1g80270 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.810e-13 Identity = 53/196 (27.04%), Postives = 100/196 (51.02%), Query Frame = 3 Query: 141 EDKLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMES-RKIHFSYTDFAVYLDLTAKTKGIAAAEEYFNGLSEYAKNRYTYGALL-NCYCKELMTERALALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSYSHLNDIDGVERV 722 + +L+K + + A G S+ AL+ ++ EG + + + + LR+ Y AL++ EW+E+ +KI + D+A LDLT K +G+ E + + K Y LL NC + + L +F KM +L F + + + ++ R+ + +K+ ++ M++ NI LTY + + NDI G+E++ Sbjct: 129 QSELFKTI--VSAPGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSEL-VFNKMKDLGFPLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGMEQI 320 The following BLAST results are available for this feature:
BLAST of CB293960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293960 ID=CB293960; Name=CB293960; organism=Citrus sinensis; type=EST; length=737bpback to top |