CB293970
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293970 vs. ExPASy Swiss-Prot
Match: H2A_MYTGA (Histone H2A OS=Mytilus galloprovincialis PE=3 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 4.045e-25 Identity = 64/108 (59.26%), Postives = 78/108 (72.22%), Query Frame = 3 Query: 255 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSSKE 575 SRSSRAGLQFPVGR+HRLL++ Y AA+LEYL AEVLELAGNA++D K RI PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K +++ Sbjct: 16 SRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPV-YLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTQK 122
BLAST of CB293970 vs. ExPASy Swiss-Prot
Match: H2A_MYTED (Histone H2A OS=Mytilus edulis PE=3 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 4.045e-25 Identity = 64/108 (59.26%), Postives = 78/108 (72.22%), Query Frame = 3 Query: 255 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSSKE 575 SRSSRAGLQFPVGR+HRLL++ Y AA+LEYL AEVLELAGNA++D K RI PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K +++ Sbjct: 16 SRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPV-YLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTQK 122
BLAST of CB293970 vs. ExPASy Swiss-Prot
Match: H2A_MYTCH (Histone H2A OS=Mytilus chilensis PE=3 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 4.045e-25 Identity = 64/108 (59.26%), Postives = 78/108 (72.22%), Query Frame = 3 Query: 255 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSSKE 575 SRSSRAGLQFPVGR+HRLL++ Y AA+LEYL AEVLELAGNA++D K RI PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K +++ Sbjct: 16 SRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPV-YLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTQK 122
BLAST of CB293970 vs. ExPASy Swiss-Prot
Match: H2A_MYTCA (Histone H2A OS=Mytilus californianus PE=3 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 4.045e-25 Identity = 64/108 (59.26%), Postives = 78/108 (72.22%), Query Frame = 3 Query: 255 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSSKE 575 SRSSRAGLQFPVGR+HRLL++ Y AA+LEYL AEVLELAGNA++D K RI PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K +++ Sbjct: 16 SRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPV-YLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTQK 122
BLAST of CB293970 vs. ExPASy Swiss-Prot
Match: H2AX_XENLA (Histone H2A.x OS=Xenopus laevis GN=h2afx PE=1 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 4.045e-25 Identity = 64/106 (60.38%), Postives = 77/106 (72.64%), Query Frame = 3 Query: 255 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSS 569 +RSSRAGLQFPVGRVHRLL++ Y AA+LEYLTAE+LELAGNA++D K RI PRHLQLA+R DEEL+ L+ G TIA GGV+P+I L+ K S Sbjct: 17 TRSSRAGLQFPVGRVHRLLRKGNYAHRVGAGAPV-YLAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKS 121
BLAST of CB293970 vs. ExPASy Swiss-Prot
Match: H2AX_HUMAN (Histone H2A.x OS=Homo sapiens GN=H2AFX PE=1 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 4.045e-25 Identity = 65/106 (61.32%), Postives = 77/106 (72.64%), Query Frame = 3 Query: 255 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSS 569 SRSSRAGLQFPVGRVHRLL++ Y AA+LEYLTAE+LELAGNA++D K RI PRHLQLAIR DEEL+ L+ G TIA GGV+P+I L+ K + Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPV-YLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CB293970 vs. ExPASy Swiss-Prot
Match: H2A2B_MOUSE (Histone H2A type 2-B OS=Mus musculus GN=Hist2h2ab PE=1 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 4.045e-25 Identity = 64/107 (59.81%), Postives = 78/107 (72.90%), Query Frame = 3 Query: 255 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSSK 572 SRSSRAGLQFPVGRVHRLL++ Y AA+LEYLTAE+LELAGNA++D K RI PRHLQLA+R DEEL+ L+ G TIA GGV+P+I L+ K ++ Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPV-YMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTE 122
BLAST of CB293970 vs. ExPASy Swiss-Prot
Match: H2A2B_HUMAN (Histone H2A type 2-B OS=Homo sapiens GN=HIST2H2AB PE=1 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 4.045e-25 Identity = 64/107 (59.81%), Postives = 78/107 (72.90%), Query Frame = 3 Query: 255 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSSK 572 SRSSRAGLQFPVGRVHRLL++ Y AA+LEYLTAE+LELAGNA++D K RI PRHLQLA+R DEEL+ L+ G TIA GGV+P+I L+ K ++ Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPV-YLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTE 122
BLAST of CB293970 vs. ExPASy Swiss-Prot
Match: H2AJ_MACFA (Histone H2A.J OS=Macaca fascicularis GN=H2AFJ PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.283e-25 Identity = 65/107 (60.75%), Postives = 78/107 (72.90%), Query Frame = 3 Query: 255 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLI-KGTIAGGGVIPHIHKSLINKSSK 572 SRSSRAGLQFPVGRVHRLL++ Y AA+LEYLTAE+LELAGNA++D K RI PRHLQLAIR DEEL+ L+ K TIA GGV+P+I L+ K ++ Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPV-YLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTE 122
BLAST of CB293970 vs. ExPASy Swiss-Prot
Match: H2AJ_HUMAN (Histone H2A.J OS=Homo sapiens GN=H2AFJ PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.283e-25 Identity = 65/107 (60.75%), Postives = 78/107 (72.90%), Query Frame = 3 Query: 255 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLI-KGTIAGGGVIPHIHKSLINKSSK 572 SRSSRAGLQFPVGRVHRLL++ Y AA+LEYLTAE+LELAGNA++D K RI PRHLQLAIR DEEL+ L+ K TIA GGV+P+I L+ K ++ Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPV-YLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTE 122 The following BLAST results are available for this feature:
BLAST of CB293970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 241
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293970 ID=CB293970; Name=CB293970; organism=Citrus sinensis; type=EST; length=760bpback to top |