CB293971
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293971 vs. ExPASy Swiss-Prot
Match: VAM7B_DICDI (Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum GN=vamp7B PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.072e-32 Identity = 72/189 (38.10%), Postives = 117/189 (61.90%), Query Frame = 3 Query: 111 LIYSFVARGTVILAEYTEFTGNFTGIAAQCLQKLPSSNNKFTYNCDGHTFNYLVDDGFTYCVVAVESVGRQVPIAFLERVKEDFIKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNI-EKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMK 674 +IYS VARG+ +LAE+T GNF I + L +P ++ K +Y + + F+YLV D TY +A E GR++P FL+ VK F Y G K TA+A G+N +F L+ M + + + +++ A++ EVK +++ +I ++L RGEKIE+LV+RT+ L Q+ F++Q Q++ MW++N+K Sbjct: 3 IIYSLVARGSSVLAEFTSTNGNFVTITRRILDLIPPNDTKMSYVYEKYIFHYLVSDTLTYLCMADEEFGRRIPFTFLDDVKNRFKSMY-GDKGKTAIAYGMNSDFSRTLENLMDH-YSNTTRVDTMSRTMAEIDEVKNILVSDIAPQLLKRGEKIEMLVERTDTLNQQSFKFKKQSKQLKCAMWWKNVK 189
BLAST of CB293971 vs. ExPASy Swiss-Prot
Match: VA712_ARATH (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana GN=VAMP712 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.235e-30 Identity = 67/190 (35.26%), Postives = 119/190 (62.63%), Query Frame = 3 Query: 108 SLIYSFVARGTVILAEYTEFTGNFTGIAAQCLQKLPSSNNKF-TYNCDGHTFNYLVDDGFTYCVVAVESVGRQVPIAFLERVKEDFIKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMK 674 S++Y+ VARGTV+LAE + + N + IA Q L+K+P + + +Y+ D + F+ DG T +A E GR++P +FLE + + F++ YG +A A +N EF L + ++Y + P ++++K ++++V+ VM++NI+ +LDRGE++ELLVD+T N++ FR+Q + +W++N K Sbjct: 2 SILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRA-IHSAQAYAMNDEFSRVLNQQIEYYSNDPNA-DTISRIKGEMNQVRDVMIENIDNILDRGERLELLVDKTANMQGNTFRFRKQTRRFNNTVWWRNCK 189
BLAST of CB293971 vs. ExPASy Swiss-Prot
Match: VAMP7_MOUSE (Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.506e-29 Identity = 67/189 (35.45%), Postives = 110/189 (58.20%), Query Frame = 3 Query: 108 SLIYSFVARGTVILAEYTEFTGNFTGIAAQCLQKLPSSNNKFTYNCDGHTFNYLVDDGFTYCVVAVESVGRQVPIAFLERVKEDFIKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMK 674 +++++ VARGT ILA++ GNF + Q L K+PS NNK TY+ + F+Y+ D Y + + R +FL VK+ F Y G +A TA+ +N EF L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+D+TENL + F+ + R M +N+K Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KSLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNIK 188
BLAST of CB293971 vs. ExPASy Swiss-Prot
Match: VAMP7_CHICK (Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.506e-29 Identity = 70/191 (36.65%), Postives = 108/191 (56.54%), Query Frame = 3 Query: 108 SLIYSFVARGTVILAEYTEFTGNFTGIAAQCLQKLPSSNNKFTYNCDGHTFNYLVDDGFTYCVVAVESVGRQVPIAFLERVKEDFIKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEE--ISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMK 674 +++++ VARGT ILA++ GNF + Q L K+PS NNK TY+ + F+Y+ D Y + + R FL +K+ F Y G +A TA+ +N EF L ++Y H E ++A+ +AQV E+KG+M+ NI+ V RGEK+ELL+D+TENL + F+ + R M +N+K Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIIYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKY---HSESKGTDQVAETQAQVDELKGIMVRNIDLVAQRGEKLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLK 188
BLAST of CB293971 vs. ExPASy Swiss-Prot
Match: VAMP7_RAT (Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.227e-28 Identity = 66/189 (34.92%), Postives = 109/189 (57.67%), Query Frame = 3 Query: 108 SLIYSFVARGTVILAEYTEFTGNFTGIAAQCLQKLPSSNNKFTYNCDGHTFNYLVDDGFTYCVVAVESVGRQVPIAFLERVKEDFIKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMK 674 +++++ VARGT ILA++ GNF + Q L K+PS NNK TY+ + F+Y+ D Y + + R FL VK+ F Y G +A TA+ +N EF L +++ ++ + + ++ + +AQV E+KG+M+ NI+ V RGE++ELL+D+TENL + F+ + R M +N+K Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFGFLNEVKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-QSLDRVTETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCVKNVK 188
BLAST of CB293971 vs. ExPASy Swiss-Prot
Match: VAMP7_HUMAN (Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 2.092e-28 Identity = 66/189 (34.92%), Postives = 109/189 (57.67%), Query Frame = 3 Query: 108 SLIYSFVARGTVILAEYTEFTGNFTGIAAQCLQKLPSSNNKFTYNCDGHTFNYLVDDGFTYCVVAVESVGRQVPIAFLERVKEDFIKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMK 674 +++++ VARGT ILA++ GNF + Q L K+PS NNK TY+ + F+Y+ D Y + + R FL +K+ F Y G +A TA+ +N EF L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+D+TENL + F+ + R M +N+K Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLK 188
BLAST of CB293971 vs. ExPASy Swiss-Prot
Match: VAMP7_BOVIN (Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.092e-28 Identity = 66/189 (34.92%), Postives = 109/189 (57.67%), Query Frame = 3 Query: 108 SLIYSFVARGTVILAEYTEFTGNFTGIAAQCLQKLPSSNNKFTYNCDGHTFNYLVDDGFTYCVVAVESVGRQVPIAFLERVKEDFIKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMK 674 +++++ VARGT ILA++ GNF + Q L K+PS NNK TY+ + F+Y+ D Y + + R FL +K+ F Y G +A TA+ +N EF L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+D+TENL + F+ + R M +N+K Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLK 188
BLAST of CB293971 vs. ExPASy Swiss-Prot
Match: VAMP7_PONAB (Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2 SV=3) HSP 1 Score: 124.79 bits (312), Expect = 4.661e-28 Identity = 66/189 (34.92%), Postives = 108/189 (57.14%), Query Frame = 3 Query: 108 SLIYSFVARGTVILAEYTEFTGNFTGIAAQCLQKLPSSNNKFTYNCDGHTFNYLVDDGFTYCVVAVESVGRQVPIAFLERVKEDFIKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMK 674 +++++ VARGT ILA++ GNF + Q L K+PS NNK TY + F+Y+ D Y + + R FL +K+ F Y G +A TA+ +N EF L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+D+TENL + F+ + R M +N+K Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYPHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLK 188
BLAST of CB293971 vs. ExPASy Swiss-Prot
Match: VAM7A_DICDI (Vesicle-associated membrane protein 7A OS=Dictyostelium discoideum GN=vamp7A PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.340e-26 Identity = 65/193 (33.68%), Postives = 110/193 (56.99%), Query Frame = 3 Query: 96 MGQQSLIYSFVARGTVILAEYTEFTGNFTGIAAQCLQKLPSSNNKFTYNCDGHTFNYLVDDGFTYCVVAVESVGRQVPIAFLERVKEDFIKRYGGGKAATAVANGLNKEFGPKLKEHMQYCIDHPEEISKLAKVKAQVSEVKGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMK 674 M Q ++Y+ V+ V L E+ GNF +A + + K+P ++ K Y + H F+Y+ ++ + + E +G Q+P FL +++ FI+ YG + + F L+E M+Y +P+ +K+ V QVSE KG + D IEK + RGEKIE++VD+TE L+S++ F+ ++RK+W+QN K Sbjct: 1 MSQTDILYACVSYKGVCLVEHKIANGNFIDLARRLITKIPPTSKKI-YTSENHNFHYISENDLAFLCLCHEKLGVQIPSEFLSDIRQQFIRSYGQSFSQNS-PTATYDPFIRVLEERMKY-YSNPKS-NKMNLVMDQVSEAKGALTDAIEKTIHRGEKIEIIVDKTERLQSESFVFKSNSVALKRKLWWQNKK 189 The following BLAST results are available for this feature:
BLAST of CB293971 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293971 ID=CB293971; Name=CB293971; organism=Citrus sinensis; type=EST; length=722bpback to top |