CB293972

Overview
NameCB293972
Unique NameCB293972
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB293972_ssr23 microsatellite CB293972_ssr23:23..32. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13557 contig Csv1_Contig13557:14..768. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293972 vs. ExPASy Swiss-Prot
Match: ENOA_DICDI (Enolase A OS=Dictyostelium discoideum GN=enoA PE=3 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 7.217e-75
Identity = 155/228 (67.98%), Postives = 180/228 (78.95%), Query Frame = 2
Query:   83 ITAVKARQIFDSRGNPTVEVDV-TTSDGHVA--RAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE 754
            I ++KAR+I +SRGNPTVEVD+ T  DG V+  RAAVPSGASTGIYEA+ELRDG  S YLGKGV KA+ N+  +I PA+ GK  ++Q AID  M+  LDGT N     K KLGANAILAVSLAVC+AGA  + +PLYK+I+E++G K + LPVPAFNVINGGSHAGNKLAMQEFMILPVGA  F EA +MG EVYH+LK VI  +YGQDA NVGDEGGFAP IQ NKE
Sbjct:    4 IKSIKAREILNSRGNPTVEVDLYTEKDGVVSSFRAAVPSGASTGIYEAVELRDGDKSRYLGKGVLKAIKNILEVIQPAVIGKSVSDQAAIDKLMID-LDGTPN-----KGKLGANAILAVSLAVCRAGAADRNLPLYKYISEIAGTK-MRLPVPAFNVINGGSHAGNKLAMQEFMILPVGAKDFNEAYRMGSEVYHNLKNVISGRYGQDAINVGDEGGFAPPIQSNKE 224          
BLAST of CB293972 vs. ExPASy Swiss-Prot
Match: ENO_HOMGA (Enolase OS=Homarus gammarus PE=1 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.505e-72
Identity = 151/228 (66.23%), Postives = 173/228 (75.88%), Query Frame = 2
Query:   80 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE 754
            +IT V AR IFDSRGNPTVEVD+ TS G + RAAVPSGASTG++EALE+RDG  S Y GK V  AV NVN +I P +  +G   T+Q   D +M + LDGT N     K  LGANAIL VSLA+CKAGA    IPLY+HIA L+    ++LPVPAFNVINGGSHAGNKLAMQEFMILP GA+SF EAM+MG EVYHHLKAVIK ++G DAT VGDEGGFAPNI  NK+
Sbjct:    1 SITKVFARTIFDSRGNPTVEVDLYTSKG-LFRAAVPSGASTGVHEALEMRDGDKSKYHGKSVFNAVKNVNDVIVPEIIKSGLKVTQQKECDEFMCK-LDGTEN-----KSSLGANAILGVSLAICKAGAAELGIPLYRHIANLANYDEVILPVPAFNVINGGSHAGNKLAMQEFMILPTGATSFTEAMRMGTEVYHHLKAVIKARFGLDATAVGDEGGFAPNILNNKD 221          
BLAST of CB293972 vs. ExPASy Swiss-Prot
Match: ENO1_ENTHI (Enolase 1 OS=Entamoeba histolytica GN=ENL-1 PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.840e-70
Identity = 138/227 (60.79%), Postives = 171/227 (75.33%), Query Frame = 2
Query:   77 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE 754
            ++I  V AR+I DSRGNPT+EV++TT  G + R+ VPSGASTG++EA+ELRDG    Y GKGV KAV NVN IIGPAL GK+   Q  +D  M++ LDGT N     K KLGANAIL  S+++C+A A  K +PLYK++AEL+G+K + +PVP FNVINGG+HAGN LAMQEFMI P GA++F EA++M  E Y  LK VIK KYGQDATNVGDEGGFAPN+   +E
Sbjct:    1 MSIQKVHAREILDSRGNPTIEVEITTGKG-MFRSCVPSGASTGVHEAVELRDGDKKRYGGKGVLKAVENVNTIIGPALLGKNVLNQAELDEMMIK-LDGTNN-----KGKLGANAILGCSMSICRAAAAEKGLPLYKYLAELTGHKEMTMPVPCFNVINGGAHAGNALAMQEFMICPTGATNFHEALRMAAETYQCLKVVIKAKYGQDATNVGDEGGFAPNVSGARE 220          
BLAST of CB293972 vs. ExPASy Swiss-Prot
Match: ENO_ALLMI (Enolase (Fragment) OS=Alligator mississippiensis PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 3.138e-70
Identity = 144/207 (69.57%), Postives = 167/207 (80.68%), Query Frame = 2
Query:  143 DVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE 754
            D+ TS G + RAAVPSGASTGIYEALELRD     ++GKGVSKAV++VN  I PAL  K+ +  EQ  ID  M++ +DG+ N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLAMQEFMILPVGA SFKEAM++G EVYH+LK VIK+KYG+DATNVGDEGGFAPNI ENKE
Sbjct:    1 DLYTSKG-LFRAAVPSGASTGIYEALELRDNDKTRFMGKGVSKAVAHVNKTIAPALISKNISVVEQEKIDRLMLE-MDGSEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFKEAMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKE 200          
BLAST of CB293972 vs. ExPASy Swiss-Prot
Match: ENOB_DICDI (Enolase B OS=Dictyostelium discoideum GN=enoB PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.010e-68
Identity = 133/227 (58.59%), Postives = 171/227 (75.33%), Query Frame = 2
Query:   77 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE 754
            ++I ++KAR+I DSRGNPT+EV+V TS+G  + A VPSGASTGI+EA ELRDG  S Y G GV  A+ NVN +I P L G     Q AID+ M++ LDGT N     K KLG+NAI+ VS+AV +A A +K +PLY++I++L+GN N+ LPVP FNVINGG HAGN+L  QEFM++P+GA  FKEA++ G EVYH LK +IK++YG DATNVGDEGGFAPN+   +E
Sbjct:    1 MSIESIKAREILDSRGNPTLEVEVWTSEGMFS-AKVPSGASTGIHEAFELRDGDKSRYFGYGVLNAIVNVNNLISPTLKGMRVDNQKAIDDKMIE-LDGTKN-----KSKLGSNAIVGVSMAVARAAASIKGVPLYRYISQLAGNSNIRLPVPCFNVINGGKHAGNRLPFQEFMLVPIGAPKFKEALRYGSEVYHSLKEIIKERYGLDATNVGDEGGFAPNLTSPEE 220          
BLAST of CB293972 vs. ExPASy Swiss-Prot
Match: ENO_ASHGO (Enolase OS=Ashbya gossypii GN=ENO PE=3 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 6.543e-68
Identity = 143/231 (61.90%), Postives = 173/231 (74.89%), Query Frame = 2
Query:   77 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE 754
            + I+ V AR ++DSRGNPTVEV+VTT +G   R+ VPSGASTG++EALELRDG  S +LGKGV+KAVSNVN II PAL  A  D  +Q A+D  M+  LDGT N     K KLGANAIL VS+AV KA A  KK+PLY+H+A+L+G+     VLPVP  NV+NGGSHAG  LA+QEFMI P GA SF EA++MG EVYH+LK++ KK+YG  A NVGDEGG APNIQ  +E
Sbjct:    1 MAISKVYARSVYDSRGNPTVEVEVTTENG-TFRSIVPSGASTGVHEALELRDGDKSKWLGKGVTKAVSNVNDIIAPALLSANVDVKDQKAVDALMLT-LDGTPN-----KSKLGANAILGVSMAVAKAAAAEKKVPLYQHLADLAGSSTTPFVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAESFSEALRMGSEVYHNLKSLTKKRYGASAGNVGDEGGVAPNIQTAEE 224          
BLAST of CB293972 vs. ExPASy Swiss-Prot
Match: ENO11_SCHPO (Enolase 1-1 OS=Schizosaccharomyces pombe GN=eno101 PE=1 SV=2)

HSP 1 Score: 255.373 bits (651), Expect = 2.486e-67
Identity = 142/230 (61.74%), Postives = 171/230 (74.35%), Query Frame = 2
Query:   77 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE 754
            + I  V ARQI+DSRGNPTVEVD+TT  G + RA VPSGASTGI+EALE+RDG  + + GKGV KAV NVN II PA+  A  D T+Q A D ++++ LDGT N     K KLGANAIL VS+A+C+AGA  KK+PL+K+IAE  G K   VLPVP+FNV+NGGSHAG  LA QEFMILP GA SF EAM+ G E YH LK++ KK+YG  A NVGDEGG AP++Q  +E
Sbjct:    1 MAIQKVFARQIYDSRGNPTVEVDLTTETG-IHRAIVPSGASTGIWEALEMRDGDKTKWGGKGVLKAVGNVNNIIAPAVVKANLDVTDQKAADEFLLK-LDGTEN-----KSKLGANAILGVSMAICRAGAAQKKLPLWKYIAENFGTKGPYVLPVPSFNVLNGGSHAGGDLAFQEFMILPTGAPSFSEAMRWGAETYHTLKSIAKKRYGSSAGNVGDEGGIAPDLQTPQE 223          
BLAST of CB293972 vs. ExPASy Swiss-Prot
Match: ENO2_DEBHA (Enolase 2 OS=Debaryomyces hansenii GN=ENO2 PE=3 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.749e-66
Identity = 138/231 (59.74%), Postives = 173/231 (74.89%), Query Frame = 2
Query:   77 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE 754
            + +T + AR ++DSRGNPTVEVD+TT  G + R+ VPSGASTGI+EALELRDG  S +LGKGV+KAV+NVN +I PA   A  D T Q+A+D+++  +LDGT N     K KLGANAIL VSLA  KA A  K +PLY+H+A++SG+K    VLPVP  NV+NGGSHAG  LA QEFMI+P  A +F EA++MG EVYH+LK++ KKKYGQ A NVGDEGG AP+I   +E
Sbjct:    1 MAVTKLFARYVYDSRGNPTVEVDLTTDKG-LFRSIVPSGASTGIHEALELRDGDKSKWLGKGVTKAVANVNELIAPAFVKANLDVTNQSAVDDFL-NKLDGTPN-----KSKLGANAILGVSLATAKAAAAEKNVPLYQHLADISGSKQDKFVLPVPFQNVLNGGSHAGGALAFQEFMIVPTDAPTFSEALRMGSEVYHNLKSLTKKKYGQSAGNVGDEGGVAPDIGSPRE 224          
BLAST of CB293972 vs. ExPASy Swiss-Prot
Match: ENO_KLULA (Enolase OS=Kluyveromyces lactis GN=ENO PE=3 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 3.590e-66
Identity = 140/229 (61.14%), Postives = 168/229 (73.36%), Query Frame = 2
Query:   83 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE 754
            I+ V AR ++DSRGNPTVEV++TT  G   R+ VPSGASTG++EALELRDG  S +LGKGV  AVSNVN II PAL  A  D T Q  +D+ ++  LDGT N     K KLGANAIL VSLA  KAGA  K +PLY+H+A+L+G K    VLPVP  NV+NGGSHAG  LA+QEFMI P GA +F EA++MG EVYH+LK++ KK+YG  A NVGDEGG APNIQ  +E
Sbjct:    3 ISKVYARSVYDSRGNPTVEVELTTEKG-TFRSIVPSGASTGVHEALELRDGDKSKWLGKGVLTAVSNVNNIIAPALVKANVDVTNQQQVDDLLLS-LDGTAN-----KSKLGANAILGVSLAASKAGAAAKNVPLYQHLADLAGAKTQPFVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAETFAEALRMGSEVYHNLKSLTKKRYGASAGNVGDEGGVAPNIQTAEE 224          
BLAST of CB293972 vs. ExPASy Swiss-Prot
Match: ERR3_YEAST (Enolase-related protein 3 OS=Saccharomyces cerevisiae GN=ERR3 PE=1 SV=2)

HSP 1 Score: 250.751 bits (639), Expect = 6.124e-66
Identity = 140/226 (61.95%), Postives = 169/226 (74.78%), Query Frame = 2
Query:   77 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKD--PTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNI 739
            ++IT V AR ++DSRGNPTVEV++TT +G + RA VPSGASTGI+EA+ELRDG  S+++GKGV+KAVSNVN+IIGPAL   D   T Q  ID  M+  LDGT N     K +LGANAIL VSL V +A A  K I LYK+IAEL+  +    V+PVP FNV+NGG+HAG  LAMQEF I PVGA SF EAM+MG EVYHHLK + K++YG  A NVGDEGG AP+I
Sbjct:    1 MSITKVHARTVYDSRGNPTVEVEITTENG-LFRAIVPSGASTGIHEAVELRDGNKSEWMGKGVTKAVSNVNSIIGPALIKSDLCVTNQKGIDELMIS-LDGTSN-----KSRLGANAILGVSLCVARAAAAQKGITLYKYIAELADARQDPFVIPVPFFNVLNGGAHAGGSLAMQEFKIAPVGAQSFAEAMRMGSEVYHHLKILAKEQYGPSAGNVGDEGGVAPDI 219          
The following BLAST results are available for this feature:
BLAST of CB293972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENOA_DICDI7.217e-7567.98Enolase A OS=Dictyostelium discoideum GN=enoA PE=3... [more]
ENO_HOMGA1.505e-7266.23Enolase OS=Homarus gammarus PE=1 SV=1[more]
ENO1_ENTHI1.840e-7060.79Enolase 1 OS=Entamoeba histolytica GN=ENL-1 PE=2 S... [more]
ENO_ALLMI3.138e-7069.57Enolase (Fragment) OS=Alligator mississippiensis P... [more]
ENOB_DICDI5.010e-6858.59Enolase B OS=Dictyostelium discoideum GN=enoB PE=3... [more]
ENO_ASHGO6.543e-6861.90Enolase OS=Ashbya gossypii GN=ENO PE=3 SV=1[more]
ENO11_SCHPO2.486e-6761.74Enolase 1-1 OS=Schizosaccharomyces pombe GN=eno101... [more]
ENO2_DEBHA2.749e-6659.74Enolase 2 OS=Debaryomyces hansenii GN=ENO2 PE=3 SV... [more]
ENO_KLULA3.590e-6661.14Enolase OS=Kluyveromyces lactis GN=ENO PE=3 SV=1[more]
ERR3_YEAST6.124e-6661.95Enolase-related protein 3 OS=Saccharomyces cerevis... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_01de09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01de09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293972 ID=CB293972; Name=CB293972; organism=Citrus sinensis; type=EST; length=755bp
GCACTAGGGTCGCACTCACAGACTCTCTCTCTCGTTCTAGATCTTTCTTC
GCTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACTGCCGTCAAAGCC
AGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCGACGTGAC
AACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGTGCATCCA
CCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGATTACCTA
GGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGCCATCATTGGCCC
TGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGACAACTATA
TGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGTTGGTGCAAACAG
AAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCTGCAAGGC
TGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCCGAACTCT
CTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGTCATTAAT
GGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGAGTTTATGATTCT
TCCTGTAGGAGCTTCCTCTTTCAAAGAAGCCATGAAGATGGGTGTAGAAG
TATATCACCATCTGAAGGCTGTGATTAAAAAGAAATACGGCCAGGATGCT
ACAAATGTTGGTGATGAAGGCGGTTTTGCTCCCAATATTCAGGAGAACAA
GGAAG
back to top