CB293972

Overview
NameCB293972
Unique NameCB293972
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB293972_ssr23 microsatellite CB293972_ssr23:23..32. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13557 contig Csv1_Contig13557:14..768. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293972 vs. ExPASy Swiss-Prot
Match: ENO_CRYPA (Enolase OS=Cryphonectria parasitica GN=ENO1 PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.045e-65
Identity = 137/228 (60.09%), Postives = 167/228 (73.25%), Query Frame = 2
Query:   83 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE 754
            I+ + AR ++DSRGNPTVEVD+ T  G + RA VPSGASTG +EA ELRDG  S +LGKGV KAV NVN ++GP L  AG D  +QTA+D ++++ LDGT N     K KLGANAIL VSLAV KAGA  K +PLY H+++L+G K   VLPVP  NV+NGGSHAG +LA QEFMI+P  A SF E ++ G E YH LK++ KKKYGQ A NVGDEGG AP+IQ  +E
Sbjct:    3 ISKIHARYVYDSRGNPTVEVDLVTETG-LHRAIVPSGASTGQHEACELRDGDKSKWLGKGVLKAVENVNTVLGPELIKAGLDVKDQTAVDEFLIK-LDGTAN-----KTKLGANAILGVSLAVAKAGAAEKGVPLYAHVSDLAGTKKPYVLPVPFQNVLNGGSHAGGRLAFQEFMIVPSAAPSFSEGLRWGAETYHQLKSLAKKKYGQSAGNVGDEGGVAPDIQTAEE 223          
BLAST of CB293972 vs. ExPASy Swiss-Prot
Match: ERR1_YEAST (Enolase-related protein 1/2 OS=Saccharomyces cerevisiae GN=ERR1 PE=1 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.782e-65
Identity = 139/226 (61.50%), Postives = 169/226 (74.78%), Query Frame = 2
Query:   77 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKD--PTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNI 739
            ++IT V AR ++DSRGNPTVEV++TT +G + RA VPSGASTGI+EA+ELRDG  S+++GKGV+KAVSNVN+IIGPAL   +   T Q  ID  M+  LDGT N     K +LGANAIL VSL V +A A  K I LYK+IAEL+  +    V+PVP FNV+NGG+HAG  LAMQEF I PVGA SF EAM+MG EVYHHLK + K++YG  A NVGDEGG AP+I
Sbjct:    1 MSITKVHARTVYDSRGNPTVEVEITTENG-LFRAIVPSGASTGIHEAVELRDGNKSEWMGKGVTKAVSNVNSIIGPALIKSELCVTNQKGIDELMIS-LDGTSN-----KSRLGANAILGVSLCVARAAAAQKGITLYKYIAELADARQDPFVIPVPFFNVLNGGAHAGGSLAMQEFKIAPVGAQSFAEAMRMGSEVYHHLKILAKEQYGPSAGNVGDEGGVAPDI 219          
BLAST of CB293972 vs. ExPASy Swiss-Prot
Match: ENO1_DEBHA (Enolase 1 OS=Debaryomyces hansenii GN=ENO1 PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.782e-65
Identity = 139/231 (60.17%), Postives = 171/231 (74.03%), Query Frame = 2
Query:   77 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE 754
            +TI+ V +R ++DSRGNPTVEVDVTT +G + RA VPSGASTGI EA+ELRDG  S + GKGV+KAV NVN  I P L  +G D   Q  ID+++++ LDGT N     K+ LGANAIL VSLAV KAGA  K++PLY+HIA++S +K    VLPVP  NV+NGGSHAG  LA QEFMI P  A SF EA+++G EVYHHLK++ K KYGQ A NVGDEGG AP+I+  +E
Sbjct:    1 MTISKVHSRYVYDSRGNPTVEVDVTTENG-LFRAIVPSGASTGINEAMELRDGDKSKWQGKGVTKAVDNVNKTIAPHLIKSGLDEKNQEEIDSFLLK-LDGTPN-----KRSLGANAILGVSLAVAKAGAAAKQVPLYRHIADISKSKQDKYVLPVPFQNVLNGGSHAGGSLAFQEFMIAPTNAPSFSEALRIGSEVYHHLKSLTKSKYGQSAGNVGDEGGVAPDIETPEE 224          
BLAST of CB293972 vs. ExPASy Swiss-Prot
Match: ENO_RHORB (Enolase OS=Rhodotorula rubra GN=ENO PE=1 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.039e-65
Identity = 139/231 (60.17%), Postives = 169/231 (73.16%), Query Frame = 2
Query:   77 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE 754
            + I+ + +R ++DSRGNPTVEV++TT  G   R+ VPSGASTG++EALELRDG  S +LGKGV KAV+NVN  I PAL  A  D  +Q  ID ++++ LDGT N     K KLGANAIL VSLA  KAGA  K +PLYKHIA++S  K    VLPVP  NV+NGGSHAG  LA QEFMI+P GA SF E +++G EVYHHLK++ KKKYGQ A NVGDEGG AP+I+  KE
Sbjct:    1 MAISKIHSRYVYDSRGNPTVEVELTTEKG-TFRSIVPSGASTGVHEALELRDGDKSKWLGKGVLKAVANVNDTIAPALIEANIDVADQAKIDEFLLK-LDGTPN-----KAKLGANAILGVSLAAAKAGAAQKDVPLYKHIADISKAKEGKFVLPVPFQNVLNGGSHAGGDLAFQEFMIVPSGAPSFSEGLRIGSEVYHHLKSLTKKKYGQSAGNVGDEGGVAPDIKTAKE 224          
BLAST of CB293972 vs. ExPASy Swiss-Prot
Match: ENO1_CANGA (Enolase 1 OS=Candida glabrata GN=ENO1 PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.508e-64
Identity = 138/226 (61.06%), Postives = 167/226 (73.89%), Query Frame = 2
Query:   77 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNI 739
            +++T V AR ++DSRGNPTVEV+V T DG + RA VPSGASTG +EALELRDG  S + GKGV+KAVSNVN IIGP L     D  +Q AID +M++ LDGT N     K KLGANAIL VSLAV +AGA  K +PLY+HIAEL+  K    V+P P FNV+NGG HAG  LA+QEF+I PVGA SF EA+++G EVYH LKA+ KK+ G  A NVGDEGG AP++
Sbjct:    1 MSVTKVHARTVYDSRGNPTVEVEVYTKDG-MFRAIVPSGASTGSHEALELRDGDKSKWEGKGVTKAVSNVNDIIGPKLIESKLDVKDQKAIDEFMIK-LDGTKN-----KSKLGANAILGVSLAVARAGAAAKGVPLYQHIAELADMKKEPYVIPCPFFNVLNGGVHAGGNLALQEFLIAPVGAESFHEALRLGSEVYHKLKALAKKRIGSSAGNVGDEGGIAPSL 219          
BLAST of CB293972 vs. ExPASy Swiss-Prot
Match: ENO2_CANGA (Enolase 2 OS=Candida glabrata GN=ENO2 PE=3 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.970e-64
Identity = 134/231 (58.01%), Postives = 169/231 (73.16%), Query Frame = 2
Query:   77 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE 754
            + ++ V AR ++DSRGNPTVEV++TT  G V R+ VPSGASTGI+EALE+RDG  S +LGKGV  AV NVN +I PA   A  D  +Q A+D+ ++  LDGT N     K KLGANAIL VS+A  +A A  K +PLY+H+A+LS +K    VLPVP  NV+NGGSHAG  LA+QEFMI P GA SF+EAM++G EVYH+LK++ KK+YG  A NVGDEGG AP+IQ  +E
Sbjct:    1 MAVSKVYARSVYDSRGNPTVEVELTTEKG-VFRSIVPSGASTGIHEALEMRDGDKSKWLGKGVENAVKNVNDVIAPAFVKANVDIKDQKAVDDLLLS-LDGTAN-----KSKLGANAILGVSMAAARAAAAEKNVPLYQHLADLSDSKTSPFVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAKSFREAMRIGSEVYHNLKSLTKKRYGSSAGNVGDEGGVAPDIQTAEE 224          
BLAST of CB293972 vs. ExPASy Swiss-Prot
Match: ENO_TUBBO (Enolase OS=Tuber borchii GN=eno-1 PE=1 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.573e-64
Identity = 139/228 (60.96%), Postives = 165/228 (72.37%), Query Frame = 2
Query:   83 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE 754
            IT + AR ++DSRGNPTVEVD+TT+D  + RA VPSGASTG +EA+ELRD   + + GKGV KAV NVN II PAL  +  D  +Q  ID +++  LDGT N     K KLGANAIL VSLAV KAGA  KK+PLY H+A+L+G K   VLPVP  NVINGGSHAG +LA QEFMI+P  A SF EAM+ G EVY  LK + KKKYGQ A NVGDEGG+ P+IQ  +E
Sbjct:    2 ITKIHARSVYDSRGNPTVEVDLTTTDTGLHRAIVPSGASTGQHEAIELRDKDKTKWAGKGVLKAVENVNTIIAPALIKEKFDVKDQATIDKFLID-LDGTPN-----KAKLGANAILGVSLAVAKAGAAAKKVPLYAHVADLAGTKKPFVLPVPFMNVINGGSHAGGRLAFQEFMIVPSEAPSFTEAMRQGAEVYQILKTLTKKKYGQSAGNVGDEGGW-PDIQTVEE 222          
BLAST of CB293972 vs. ExPASy Swiss-Prot
Match: ENO_CLAHE (Enolase OS=Cladosporium herbarum GN=ENO PE=1 SV=2)

HSP 1 Score: 245.358 bits (625), Expect = 2.573e-64
Identity = 135/228 (59.21%), Postives = 167/228 (73.25%), Query Frame = 2
Query:   83 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE 754
            I+ + +R ++DSRGNPTVEVD+ T  G + RA VPSGASTG +EA ELRDG  S + GKGV+KAV+NVN II PAL  +  D  +Q A+D ++  +LDGT N     K K+GANAIL VS+AV KA A  K++PLY HI++LSG K   VLPVP  NV+NGGSHAG +LA QEFMI+P GA SF EAM+ G EVY  LK++ KK+YGQ A NVGDEGG AP+IQ  +E
Sbjct:    3 ISKIHSRYVYDSRGNPTVEVDIVTETG-LHRAIVPSGASTGSHEACELRDGDKSKWAGKGVTKAVANVNEIIAPALIKENLDVKDQAAVDAFL-NKLDGTTN-----KTKIGANAILGVSMAVAKAAAAEKRVPLYAHISDLSGTKKPFVLPVPFMNVVNGGSHAGGRLAFQEFMIVPSGAPSFTEAMRQGAEVYQKLKSLTKKRYGQSAGNVGDEGGVAPDIQTAEE 223          
BLAST of CB293972 vs. ExPASy Swiss-Prot
Match: ENO1_YEAST (Enolase 1 OS=Saccharomyces cerevisiae GN=ENO1 PE=1 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 3.360e-64
Identity = 133/231 (57.58%), Postives = 169/231 (73.16%), Query Frame = 2
Query:   77 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE 754
            + ++ V AR ++DSRGNPTVEV++TT  G V R+ VPSGASTG++EALE+RDG  S ++GKGV  AV NVN +I PA   A  D  +Q A+D++++  LDGT N     K KLGANAIL VSLA  +A A  K +PLYKH+A+LS +K    VLPVP  NV+NGGSHAG  LA+QEFMI P GA +F EA+++G EVYH+LK++ KK+YG  A NVGDEGG APNIQ  +E
Sbjct:    1 MAVSKVYARSVYDSRGNPTVEVELTTEKG-VFRSIVPSGASTGVHEALEMRDGDKSKWMGKGVLHAVKNVNDVIAPAFVKANIDVKDQKAVDDFLIS-LDGTAN-----KSKLGANAILGVSLAASRAAAAEKNVPLYKHLADLSKSKTSPYVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAKTFAEALRIGSEVYHNLKSLTKKRYGASAGNVGDEGGVAPNIQTAEE 224          
BLAST of CB293972 vs. ExPASy Swiss-Prot
Match: ENO1_CANAL (Enolase 1 OS=Candida albicans GN=ENO1 PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 4.389e-64
Identity = 139/228 (60.96%), Postives = 164/228 (71.93%), Query Frame = 2
Query:   86 TAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKE 754
            T + AR ++DSRGNPTVEVD TT  G + R+ VPSGASTG++EALELRDG  S +LGKGV KAV+NVN II PAL  A  D  +Q  ID +++  LDGT N     K KLGANAIL VSLA   A A  + IPLYKHIA +S  K    VLPVP  NV+NGGSHAG  LA QEFMI P G S+F EA+++G EVYH+LK++ KKKYGQ A NVGDEGG AP+I+  KE
Sbjct:    5 TKIHARYVYDSRGNPTVEVDFTTDKG-LFRSIVPSGASTGVHEALELRDGDKSKWLGKGVLKAVANVNDIIAPALIKAKIDVVDQAKIDEFLLS-LDGTPN-----KSKLGANAILGVSLAAANAAAAAQGIPLYKHIANISNAKKGKFVLPVPFQNVLNGGSHAGGALAFQEFMIAPTGVSTFSEALRIGSEVYHNLKSLTKKKYGQSAGNVGDEGGVAPDIKTPKE 225          
The following BLAST results are available for this feature:
BLAST of CB293972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_CRYPA1.045e-6560.09Enolase OS=Cryphonectria parasitica GN=ENO1 PE=3 S... [more]
ERR1_YEAST1.782e-6561.50Enolase-related protein 1/2 OS=Saccharomyces cerev... [more]
ENO1_DEBHA1.782e-6560.17Enolase 1 OS=Debaryomyces hansenii GN=ENO1 PE=3 SV... [more]
ENO_RHORB3.039e-6560.17Enolase OS=Rhodotorula rubra GN=ENO PE=1 SV=1[more]
ENO1_CANGA1.508e-6461.06Enolase 1 OS=Candida glabrata GN=ENO1 PE=3 SV=1[more]
ENO2_CANGA1.970e-6458.01Enolase 2 OS=Candida glabrata GN=ENO2 PE=3 SV=1[more]
ENO_TUBBO2.573e-6460.96Enolase OS=Tuber borchii GN=eno-1 PE=1 SV=1[more]
ENO_CLAHE2.573e-6459.21Enolase OS=Cladosporium herbarum GN=ENO PE=1 SV=2[more]
ENO1_YEAST3.360e-6457.58Enolase 1 OS=Saccharomyces cerevisiae GN=ENO1 PE=1... [more]
ENO1_CANAL4.389e-6460.96Enolase 1 OS=Candida albicans GN=ENO1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01de09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01de09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293972 ID=CB293972; Name=CB293972; organism=Citrus sinensis; type=EST; length=755bp
GCACTAGGGTCGCACTCACAGACTCTCTCTCTCGTTCTAGATCTTTCTTC
GCTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACTGCCGTCAAAGCC
AGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCGACGTGAC
AACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGTGCATCCA
CCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGATTACCTA
GGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGCCATCATTGGCCC
TGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGACAACTATA
TGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGTTGGTGCAAACAG
AAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCTGCAAGGC
TGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCCGAACTCT
CTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGTCATTAAT
GGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGAGTTTATGATTCT
TCCTGTAGGAGCTTCCTCTTTCAAAGAAGCCATGAAGATGGGTGTAGAAG
TATATCACCATCTGAAGGCTGTGATTAAAAAGAAATACGGCCAGGATGCT
ACAAATGTTGGTGATGAAGGCGGTTTTGCTCCCAATATTCAGGAGAACAA
GGAAG
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