CB293973

Overview
NameCB293973
Unique NameCB293973
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293973 vs. ExPASy Swiss-Prot
Match: TCTP_PEA (Translationally-controlled tumor protein homolog OS=Pisum sativum GN=TCTP PE=2 SV=2)

HSP 1 Score: 243.817 bits (621), Expect = 7.486e-64
Identity = 121/168 (72.02%), Postives = 138/168 (82.14%), Query Frame = 3
Query:   87 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIDDTFRLQEQPAFDKKPFVTYMKRFIKLLTPELSEERQDIFKRNIEGATKFLLSKLSDLQFFVGESMRDDGCLVFAYYKEGATDPTFLYMADALKEVKC 590
            MLVYQDLLTGDELLSDS+PYKEIENG+LWEVEGKWVV+GAVDV+IGANPS               KVVDI D FRLQEQP FDKK F+ ++K++IKLLTP+L  E+Q+ FK+NIEGATK+LL KL DLQFFVGESM DDG LVFAYYK+GA DPTFLY + ALKE+KC
Sbjct:    1 MLVYQDLLTGDELLSDSYPYKEIENGMLWEVEGKWVVKGAVDVNIGANPSAEGGEDEGVDDTAV-KVVDIVDVFRLQEQPPFDKKQFLGFVKKYIKLLTPKLEAEKQEHFKKNIEGATKYLLGKLKDLQFFVGESMHDDGSLVFAYYKDGAADPTFLYFSFALKEIKC 167          
BLAST of CB293973 vs. ExPASy Swiss-Prot
Match: TCTP_HORVU (Translationally-controlled tumor protein homolog OS=Hordeum vulgare GN=TCTP PE=2 SV=2)

HSP 1 Score: 243.432 bits (620), Expect = 9.777e-64
Identity = 119/168 (70.83%), Postives = 133/168 (79.17%), Query Frame = 3
Query:   87 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIDDTFRLQEQPAFDKKPFVTYMKRFIKLLTPELSEERQDIFKRNIEGATKFLLSKLSDLQFFVGESMRDDGCLVFAYYKEGATDPTFLYMADALKEVKC 590
            MLVYQD L+GDELLSDSFPY+E+ENG+LWEV+G WVVQGAVDVDIGANPS               KVVDI DTFRLQEQPAFDKK F+ Y+KR+IK LT +L  E  D FK+N+E ATK+LLSKL DLQFFVGESM DDG +VFAYY+EGA DPTFLY A  LKEVKC
Sbjct:    1 MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFIAYIKRYIKNLTAKLEGEELDAFKKNVESATKYLLSKLKDLQFFVGESMHDDGSVVFAYYREGAADPTFLYFAHGLKEVKC 168          
BLAST of CB293973 vs. ExPASy Swiss-Prot
Match: TCTP_TOBAC (Translationally-controlled tumor protein homolog OS=Nicotiana tabacum GN=TCTP PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.668e-63
Identity = 119/168 (70.83%), Postives = 137/168 (81.55%), Query Frame = 3
Query:   87 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIDDTFRLQEQPAFDKKPFVTYMKRFIKLLTPELSEERQDIFKRNIEGATKFLLSKLSDLQFFVGESMRDDGCLVFAYYKEGATDPTFLYMADALKEVKC 590
            MLVYQDLL+GDEL SDSF Y E+ NG+LWEV+GKWVVQGAVDV+IGANPS               KVVDI DTFRLQEQP+FDKK FV YMK++IK LTP+L  E++++FK NI+GATK+LLSKLSDLQFFVGESM DD  +VFAYYK+GATDPTFLY+A  LKEVKC
Sbjct:    1 MLVYQDLLSGDELPSDSFSYTELGNGVLWEVQGKWVVQGAVDVNIGANPSAEGADEDEGVDDQAIKVVDIVDTFRLQEQPSFDKKQFVAYMKKYIKNLTPKLGAEQEEVFKNNIQGATKYLLSKLSDLQFFVGESMADDTGMVFAYYKDGATDPTFLYLAHGLKEVKC 168          
BLAST of CB293973 vs. ExPASy Swiss-Prot
Match: TCTP_WHEAT (Translationally-controlled tumor protein homolog OS=Triticum aestivum GN=TCTP PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.845e-63
Identity = 118/168 (70.24%), Postives = 135/168 (80.36%), Query Frame = 3
Query:   87 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIDDTFRLQEQPAFDKKPFVTYMKRFIKLLTPELSEERQDIFKRNIEGATKFLLSKLSDLQFFVGESMRDDGCLVFAYYKEGATDPTFLYMADALKEVKC 590
            MLVYQD L+GDELLSDSFPY+E+ENG+LWEV+G WVVQGAVDVDIGANPS               KVVDI DTFRLQEQPAFDKK F+++MKR+IK L+ +L  +  D+FK+N+E ATK+LLSKL DLQFFVGESM DDG +VFAYYKEGA DPTFLY A  LKEVKC
Sbjct:    1 MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGDDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFISHMKRYIKNLSAKLEGDDLDVFKKNVESATKYLLSKLKDLQFFVGESMHDDGGVVFAYYKEGAADPTFLYFAHGLKEVKC 168          
BLAST of CB293973 vs. ExPASy Swiss-Prot
Match: TCTP_MEDSA (Translationally-controlled tumor protein homolog OS=Medicago sativa GN=TCTP PE=2 SV=2)

HSP 1 Score: 241.891 bits (616), Expect = 2.845e-63
Identity = 120/168 (71.43%), Postives = 137/168 (81.55%), Query Frame = 3
Query:   87 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIDDTFRLQEQPAFDKKPFVTYMKRFIKLLTPELSEERQDIFKRNIEGATKFLLSKLSDLQFFVGESMRDDGCLVFAYYKEGATDPTFLYMADALKEVKC 590
            MLVYQDLLTGDELLSDS+PYKEIENG+LWEVEGKWV +G V+VDIGAN S               KVVDI D FRLQEQPAFDKK F+ ++KR+IKLLTP+L  E+Q++FK++IEGATK+LL KL DLQFFVGESM DDG LVFAYYK+GA DPTFLY A ALKE+KC
Sbjct:    1 MLVYQDLLTGDELLSDSYPYKEIENGMLWEVEGKWVTKGVVEVDIGANASAEGGEDEGVDDTAV-KVVDIVDVFRLQEQPAFDKKQFLGFVKRYIKLLTPKLDAEKQELFKKHIEGATKYLLCKLKDLQFFVGESMHDDGSLVFAYYKDGAADPTFLYFAYALKEIKC 167          
BLAST of CB293973 vs. ExPASy Swiss-Prot
Match: TCTP_BRAOL (Translationally-controlled tumor protein homolog OS=Brassica oleracea GN=TCTP PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.081e-62
Identity = 117/168 (69.64%), Postives = 132/168 (78.57%), Query Frame = 3
Query:   87 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIDDTFRLQEQPAFDKKPFVTYMKRFIKLLTPELSEERQDIFKRNIEGATKFLLSKLSDLQFFVGESMRDDGCLVFAYYKEGATDPTFLYMADALKEVKC 590
            MLVY DLLTGDELLSDSFPYKEIENGILWEVEGKW  +G V+V+IGANPS               KVVDI DTFRLQEQP +DKK F+ Y+K++IKLLTP+L+ E+Q+ FK+ IEGATKFLL KL D QFFVGE M DD  +VFAYYKEGAT+PTFLY A  LKEVKC
Sbjct:    1 MLVYTDLLTGDELLSDSFPYKEIENGILWEVEGKWTTKGCVEVNIGANPSAEEGGEDEGVDDSVEKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLTPEQQEEFKKGIEGATKFLLPKLKDFQFFVGEGMHDDSTIVFAYYKEGATNPTFLYFAHGLKEVKC 168          
BLAST of CB293973 vs. ExPASy Swiss-Prot
Match: TCTP_CUCME (Translationally-controlled tumor protein homolog OS=Cucumis melo GN=TCTP PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 5.365e-62
Identity = 117/168 (69.64%), Postives = 134/168 (79.76%), Query Frame = 3
Query:   87 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIDDTFRLQEQPAFDKKPFVTYMKRFIKLLTPELSEERQDIFKRNIEGATKFLLSKLSDLQFFVGESMRDDGCLVFAYYKEGATDPTFLYMADALKEVKC 590
            MLVYQDL++GDELLSDSFPYKEIENG++WEVEGKWVV+GAVDVDIGANPS               KVVDI DTFRLQEQP+ DKK F++ +K++IK LTP L  E+Q+ FK  IEGA K+LL K+ DLQFFVGESM DD  +VFAYYKEGATDPTFLY+A  LKEVKC
Sbjct:    1 MLVYQDLVSGDELLSDSFPYKEIENGMIWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPSMDKKVFLSCIKKYIKKLTPLLQGEQQEAFKNKIEGAVKYLLPKVKDLQFFVGESMADDSAMVFAYYKEGATDPTFLYIAPGLKEVKC 168          
BLAST of CB293973 vs. ExPASy Swiss-Prot
Match: TCTP_MAIZE (Translationally-controlled tumor protein homolog OS=Zea mays GN=TCTP PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 8.565e-60
Identity = 115/168 (68.45%), Postives = 131/168 (77.98%), Query Frame = 3
Query:   87 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIDDTFRLQEQPAFDKKPFVTYMKRFIKLLTPELSEERQDIFKRNIEGATKFLLSKLSDLQFFVGESMRDDGCLVFAYYKEGATDPTFLYMADALKEVKC 590
            MLVYQDLL+GDELLSDSF YKE+ENG+LWEVEGKWV QG VDVDIGANPS               KVVDI DTFRLQEQP FDKK FV+Y+K++IK LT  L  E+ D FK+ +EGATKFLLSKL DLQFFVGESM+DD  + FAYYK+GAT+ TFLY +  LKE+KC
Sbjct:    1 MLVYQDLLSGDELLSDSFTYKELENGVLWEVEGKWVTQGPVDVDIGANPSAEGGEDESVDDTAV-KVVDIVDTFRLQEQPPFDKKSFVSYIKKYIKNLTAVLEPEKADEFKKGVEGATKFLLSKLKDLQFFVGESMKDDASVAFAYYKDGATNSTFLYFSHGLKEIKC 167          
BLAST of CB293973 vs. ExPASy Swiss-Prot
Match: TCTP_CRYNE (Translationally-controlled tumor protein homolog OS=Cryptococcus neoformans GN=CNM01460 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.292e-23
Identity = 63/170 (37.06%), Postives = 97/170 (57.06%), Query Frame = 3
Query:   87 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIDDTFRLQEQPAFDKKPFVTYMKRFIKLLTPELSEERQD---IFKRNIEGATKFLLSKLSDLQFFVGESMRDDGCLVFAYYKEGATDPTFLYMADALKEVK 587
            ML+YQD+LTGDE++SD+FP KEI + I +EV+   ++    DVDIG NPS               +V ++  +FRLQ   +FDKK ++TY+K ++K +  +L E   D    F++  +   K +++   D +F++GESM  DG +    Y+E    P F    D LKE+K
Sbjct:    1 MLIYQDVLTGDEMISDAFPIKEIGD-IAYEVDCANIIIKEGDVDIGGNPSAEEAAEALEEGAQ--QVNNVVHSFRLQST-SFDKKSYLTYLKGYMKAIKSKLQESNPDRVAAFEKGAQDFAKKIVANFKDYEFYIGESMNPDGMVCLLNYREDGVTPYFTMWKDGLKEIK 166          
BLAST of CB293973 vs. ExPASy Swiss-Prot
Match: TCTP_GIBZE (Translationally-controlled tumor protein homolog OS=Gibberella zeae GN=FG02523 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.088e-22
Identity = 66/174 (37.93%), Postives = 99/174 (56.90%), Query Frame = 3
Query:   87 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIDDTFRLQEQPAFDKKPFVTYMKRFIKLLTPELSEE---RQDIFKRNIEGATKF----LLSKLSDLQFFVGESMRDDGCLVFAYYKEGATDPTFLYMADALKEVK 587
            ML+Y D+L GDEL+SDS+  KE++ GI++E +   + +GAV+V+IGAN S               KV +I ++FRLQ    FDKK ++ Y+K ++K +  +L E     +DI K    GA+KF    ++ K  D +F+ GESM  DG +V   Y+E    P  ++    LKE K
Sbjct:    1 MLIYNDILNGDELISDSYDLKEVD-GIVYEADCAMIEEGAVEVNIGANASAEEAAEDLDDGAV--KVNNIVNSFRLQST-TFDKKSYLAYLKGYMKAIKAKLQENGSSAEDI-KAFETGASKFVKDTIVPKFKDFEFYTGESMDPDGMVVLLNYREDGVTPYTIFWKHGLKETK 169          
The following BLAST results are available for this feature:
BLAST of CB293973 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
TCTP_PEA7.486e-6472.02Translationally-controlled tumor protein homolog O... [more]
TCTP_HORVU9.777e-6470.83Translationally-controlled tumor protein homolog O... [more]
TCTP_TOBAC1.668e-6370.83Translationally-controlled tumor protein homolog O... [more]
TCTP_WHEAT2.845e-6370.24Translationally-controlled tumor protein homolog O... [more]
TCTP_MEDSA2.845e-6371.43Translationally-controlled tumor protein homolog O... [more]
TCTP_BRAOL1.081e-6269.64Translationally-controlled tumor protein homolog O... [more]
TCTP_CUCME5.365e-6269.64Translationally-controlled tumor protein homolog O... [more]
TCTP_MAIZE8.565e-6068.45Translationally-controlled tumor protein homolog O... [more]
TCTP_CRYNE1.292e-2337.06Translationally-controlled tumor protein homolog O... [more]
TCTP_GIBZE7.088e-2237.93Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02ac06_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ac06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293973 ID=CB293973; Name=CB293973; organism=Citrus sinensis; type=EST; length=755bp
TCCGCTGCGTCTCTCTCTCTCTCTCTCTCTCCAGTTTTCTCCGTTGATTA
TTTTTCTTTTTTGTGTTCGCGAGAGAGACTGCAATCATGTTGGTCTATCA
AGATCTCCTCACCGGTGATGAGCTTCTCTCCGATTCTTTTCCCTACAAGG
AAATTGAGAATGGGATTCTGTGGGAAGTTGAGGGAAAGTGGGTTGTACAA
GGAGCCGTTGATGTTGACATTGGTGCAAATCCTTCTGCCGAAGGAGCTGA
TGAGGATGAGGGTGTTGATGACCAAGCCGTGAAGGTGGTTGACATTGACG
ACACATTCAGGCTACAGGAGCAACCCGCTTTTGACAAGAAGCCGTTTGTA
ACATACATGAAGAGATTCATCAAGTTGCTGACGCCCGAGCTGAGTGAGGA
GAGGCAGGATATATTTAAGAGGAATATTGAGGGAGCGACCAAGTTCTTGC
TCTCCAAGCTCAGTGACCTTCAATTCTTTGTTGGGGAGAGCATGCGTGAT
GATGGCTGTCTTGTCTTTGCTTACTACAAGGAAGGTGCGACCGACCCAAC
ATTTTTGTATATGGCTGATGCATTGAAGGAGGTGAAGTGCTAAGCTGGGC
TTCGAAGAGGAAGTGCCTGCTGTAGTTCTAGTTTTAATTATTGCCCGCGG
TTATTTTTATGTATCGTTTGTGCTGGTTAACTCGGGACTTGCGCTTGCTG
CTTTTTAGTTTTTATTTTGACATATCCACTATGTTTTTCTGCTCTTAATT
ATTGG
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