CB293984

Overview
NameCB293984
Unique NameCB293984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB293984_ssr12 microsatellite CB293984_ssr12:12..39. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8379 contig Csv1_Contig8379:67..856. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 1433_OENEH (14-3-3-like protein OS=Oenothera elata subsp. hookeri PE=2 SV=2)

HSP 1 Score: 340.887 bits (873), Expect = 4.808e-93
Identity = 170/230 (73.91%), Postives = 201/230 (87.39%), Query Frame = 3
Query:   99 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            RE+ VYLAKLAEQAERYEEMVEFM+K V  +  + ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R N++HVS +++YRSK+E ELS++C  IL+LL++ LIPSA + +SKVFYLKMKGDYHRY+AEFK G ERK A E T+ +Y+AAQDIA A+LAPTHPIRLGLALNFSVFYYEILN  D+AC++A +AF+EAIAELDTL EESYKDSTLIMQLLR+ LTL
Sbjct:    8 REENVYLAKLAEQAERYEEMVEFMEK-VCAAADSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSTIRDYRSKIETELSNICGGILKLLDSRLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLANEAFDEAIAELDTLEEESYKDSTLIMQLLRDNLTL 236          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 14333_SOLLC (14-3-3 protein 3 OS=Solanum lycopersicum GN=TFT3 PE=2 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 6.279e-93
Identity = 175/240 (72.92%), Postives = 204/240 (85.00%), Query Frame = 3
Query:   69 MATTVPDHLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            MA   P    RE+ VY+AKLA++AE  EEMVEFM+K V  S  + ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NEEHV+ ++EYRSK+E ELS +C  IL+LL++ LIPSAT+ +SKVFYLKMKGDYHRY+AEFK G ERK A E T+ +Y+AAQDIA A+LAPTHPIRLGLALNFSVFYYEILN  D+AC++AKQAF+EAIAELDTLGEESYKDSTLIMQLLR+ LTL
Sbjct:    1 MAVVAPT--AREENVYMAKLADRAESDEEMVEFMEK-VSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDSKLIPSATSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIASAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTL 237          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 14335_ORYSJ (14-3-3-like protein GF14-E OS=Oryza sativa subsp. japonica GN=GF14E PE=2 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 1.071e-92
Identity = 172/235 (73.19%), Postives = 204/235 (86.81%), Query Frame = 3
Query:   84 PDHLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            P  L+RE+ VY+AKLAEQAERYEEMVEFM+K V  +  + ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NE+  +L+KEYR K+E ELS +C  IL+LL+++L+PS+TA ESKVFYLKMKGDY+RY+AEFK G ERK A E+TM +Y+AAQDIA A+L PTHPIRLGLALNFSVFYYEILN  D+AC++AKQAF+EAI+ELDTL EESYKDSTLIMQLLR+ LTL
Sbjct:    4 PAELSREENVYMAKLAEQAERYEEMVEFMEK-VAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTL 237          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 14334_ORYSJ (14-3-3-like protein GF14-D OS=Oryza sativa subsp. japonica GN=GF14D PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.399e-92
Identity = 171/238 (71.85%), Postives = 203/238 (85.29%), Query Frame = 3
Query:   84 PDHLTREQYVYLAKLAEQAERYEEMVEFMQKLVV---GSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            P   TRE+ VY AKLAEQAERYEEMVE+M+++     G++   ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEEGR N+ H + ++ YR K+E EL+ +C  IL LL+++L+PSA A+ESKVFYLKMKGDYHRY+AEFK GDERK A E TM +Y+AAQDIA ADLAPTHPIRLGLALNFSVFYYEILN  D+AC++AKQAF+EAI+ELD+LGEESYKDSTLIMQLLR+ LTL
Sbjct:    3 PAEPTREESVYKAKLAEQAERYEEMVEYMERVARAAGGASGGEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAELARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLRDNLTL 240          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 1433A_HORVU (14-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 1.827e-92
Identity = 171/231 (74.03%), Postives = 203/231 (87.88%), Query Frame = 3
Query:   96 TREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            TRE+ VY+AKLAEQAERYEEMVEFM+K V  +    ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NE +V+ +KEYR+++E ELS +C  IL+LL+++L+PSATA+ESKVFYLKMKGDYHRY+AEFK G ERK A E+T+ +Y++AQDIA ADL  THPIRLGLALNFSVFYYEILN  D+AC++AKQAF+EAIAELD+LGEESYKDSTLIMQLLR+ LTL
Sbjct:    7 TREENVYMAKLAEQAERYEEMVEFMEK-VAKTADVGELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRTRIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKAGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDSLGEESYKDSTLIMQLLRDNLTL 236          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 14332_ORYSJ (14-3-3-like protein GF14-B OS=Oryza sativa subsp. japonica GN=GF14B PE=1 SV=2)

HSP 1 Score: 338.576 bits (867), Expect = 2.386e-92
Identity = 171/232 (73.71%), Postives = 204/232 (87.93%), Query Frame = 3
Query:   93 LTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            L+RE+ VY+AKLAEQAERYEEMVEFM+K V  +  + ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NE+ V+L+K+YR K+E EL+ +C  IL+LLE++L+PS+TA ESKVFYLKMKGDY+RY+AEFK G ERK A E+TM +Y+AAQDIA A+L PTHPIRLGLALNFSVFYYEILN  D+AC++AKQAF+EAI+ELDTL EESYKDSTLIMQLLR+ LTL
Sbjct:    7 LSREENVYMAKLAEQAERYEEMVEFMEK-VAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTL 237          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 14331_SOLTU (14-3-3-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 1.184e-91
Identity = 172/232 (74.14%), Postives = 201/232 (86.64%), Query Frame = 3
Query:   96 TREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIG-DERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            +RE+ VY+AKLAEQAERYEEMVEFM+K  V      ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NE+HVS +KEYR K+E ELS +C  IL LLE++L+PSA+ +ESKVFYLKMKGDYHRY+AEFK G  ERK A E+T+ +Y++AQDIA A+L PTHPIRLGLALNFSVFYYEILN  D+AC++AKQAF++AIAELDTLGEESYKDSTLIMQLLR+ LTL
Sbjct:    4 SREENVYMAKLAEQAERYEEMVEFMEK--VAKVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSSIKEYRVKIEAELSKICDGILSLLESHLVPSASTAESKVFYLKMKGDYHRYLAEFKTGARERKEAAENTLLAYKSAQDIALAELTPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTL 233          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 1433B_HORVU (14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 2.020e-91
Identity = 169/235 (71.91%), Postives = 204/235 (86.81%), Query Frame = 3
Query:   84 PDHLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            P  L+RE+ VY+AKLAEQAERYEEMVEFM+K V  +  + ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NE+ V+L+K+YR K+E EL+ +C  IL+LL+++L+PS+TA ESKVFYLKMKGDY+RY+AEFK G ERK A E+TM +Y+AAQ+IA A+L PTHPIRLGLALNFSVFYYEILN  D+AC +AKQAF+EAI+ELD+L EESYKDSTLIMQLLR+ LTL
Sbjct:    4 PAELSREENVYMAKLAEQAERYEEMVEFMEK-VAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIEVELTKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKSGTERKDAAENTMVAYKAAQEIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACDLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTL 237          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 14331_ORYSJ (14-3-3-like protein GF14-A OS=Oryza sativa subsp. japonica GN=GF14A PE=2 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 3.809e-90
Identity = 167/233 (71.67%), Postives = 198/233 (84.98%), Query Frame = 3
Query:   96 TREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAA--ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            TRE+ VY+AKLAEQAERYEEMVEFM+K+V  +      ELTVEERNLLSVAYKNVIG+ RA+WRIVSSIEQKEEGR    H +  + YR++VE ELS++CA ILRLL+  L+P+A A ++KVFYLKMKGDYHRY+AEFK G ERK A + T+ +Y+AAQDIA  +L+PTHPIRLGLALNFSVFYYEILN  D+AC++AKQAF+EAI+ELDTLGEESYKDSTLIMQLLR+ LTL
Sbjct:    9 TREEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAKVFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTL 241          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 14335_SOLLC (14-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 PE=3 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 6.498e-90
Identity = 164/230 (71.30%), Postives = 199/230 (86.52%), Query Frame = 3
Query:   99 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            RE+ VY+A +A++AERYEEMVEFM+K VV +    ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NE+HV+ +K+YRS++E EL+ +C  IL+LL++ LI SA   +SKVFYLKMKGDY+RY+AEFK G ERK A E+T+ +Y++AQDIA  +LAPTHPIRLGLALNFSVFYYEILN  D+AC++AKQAF+EAIAELDTLGEESYKDSTLIMQLLR+ LTL
Sbjct:    5 REENVYMANVADEAERYEEMVEFMEK-VVAALNGEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKKYRSQIENELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYYRYLAEFKTGTERKEAAENTLSAYKSAQDIANGELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTL 233          
The following BLAST results are available for this feature:
BLAST of CB293984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433_OENEH4.808e-9373.9114-3-3-like protein OS=Oenothera elata subsp. hook... [more]
14333_SOLLC6.279e-9372.9214-3-3 protein 3 OS=Solanum lycopersicum GN=TFT3 P... [more]
14335_ORYSJ1.071e-9273.1914-3-3-like protein GF14-E OS=Oryza sativa subsp. ... [more]
14334_ORYSJ1.399e-9271.8514-3-3-like protein GF14-D OS=Oryza sativa subsp. ... [more]
1433A_HORVU1.827e-9274.0314-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1[more]
14332_ORYSJ2.386e-9273.7114-3-3-like protein GF14-B OS=Oryza sativa subsp. ... [more]
14331_SOLTU1.184e-9174.1414-3-3-like protein OS=Solanum tuberosum PE=2 SV=1[more]
1433B_HORVU2.020e-9171.9114-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1[more]
14331_ORYSJ3.809e-9071.6714-3-3-like protein GF14-A OS=Oryza sativa subsp. ... [more]
14335_SOLLC6.498e-9071.3014-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_04af04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_04af04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293984 ID=CB293984; Name=CB293984; organism=Citrus sinensis; type=EST; length=790bp
GCCCGATGCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTATCACACTT
TCAGAGCCTGTGAAAAAGATGGCGACAACAGTTCCGGACCACCTGACGAG
AGAGCAGTACGTGTACTTAGCCAAGCTAGCCGAGCAAGCCGAGCGTTACG
AAGAGATGGTGGAGTTCATGCAGAAGCTGGTTGTCGGCTCGACTCCAGCC
GCCGAGCTGACGGTCGAGGAGCGAAACCTCCTCTCAGTGGCCTACAAGAA
CGTAATCGGCTCACTCCGCGCCGCGTGGCGCATCGTGTCGTCGATCGAGC
AGAAGGAGGAGGGGAGGAAGAACGAGGAACACGTGTCGCTCGTGAAAGAG
TACAGATCGAAGGTGGAGAAGGAGCTTTCGGATGTGTGCGCGAGTATTTT
GAGGTTGTTGGAAGCGAATTTGATTCCGTCGGCTACGGCGAGTGAGTCGA
AAGTGTTTTATTTGAAAATGAAGGGAGATTATCATCGTTACATGGCCGAG
TTTAAGATTGGCGATGAGCGGAAAGCCGCCGGTGAAGACACTATGCAATC
TTACGAAGCTGCTCAGGATATTGCTGGGGCTGATCTCGCGCCGACGCATC
CGATAAGGCTGGGATTAGCTCTCAATTTCTCGGTGTTTTACTACGAGATT
CTCAATCAATCTGATAAGGCATGCAGCATGGCTAAGCAGGCATTTGAGGA
AGCAATTGCTGAGCTAGACACTTTGGGAGAAGAATCCTACAAGGACAGCA
CCCTCATTATGCAACTCCTAAGGGAGTACCTCACTCTTTG
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