CB293984

Overview
NameCB293984
Unique NameCB293984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB293984_ssr12 microsatellite CB293984_ssr12:12..39. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8379 contig Csv1_Contig8379:67..856. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 1433A_TOBAC (14-3-3-like protein A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 1.601e-88
Identity = 164/230 (71.30%), Postives = 195/230 (84.78%), Query Frame = 3
Query:   99 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            RE+ VYLAKLAEQAERYEEMVEFM+K+V       ELT+EERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NE+HV+ +K YRSK+E EL+ +C  IL+LL++ LI +A   +SKVFYLKMKGDY+RY+AEFK G ERK A E+T+ +Y++AQDIA  +LAPTHPIRLGLALNFSVFYYEILN  D+AC++AKQAF+EAIAEL TLGEESYKDSTLIMQL  + LTL
Sbjct:    5 REENVYLAKLAEQAERYEEMVEFMEKVVGAGDD--ELTIEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKTYRSKIESELTSICNGILKLLDSKLIGTAATGDSKVFYLKMKGDYYRYLAEFKTGAERKEAAENTLSAYKSAQDIANGELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELGTLGEESYKDSTLIMQLFCDNLTL 232          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 14332_SOLTU (14-3-3-like protein RA215 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.730e-88
Identity = 161/230 (70.00%), Postives = 197/230 (85.65%), Query Frame = 3
Query:   99 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            RE+ VY+A +A +AERYEEMVEFM+K+V       ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NE+HV+ +K+YRS++E EL+ +C  IL+LL++ LI SA   +SKVFYLKMKGDY+RY+AEFK G ERK A E+T+ +Y++AQDIA  +LAPTHPIRLGLALNFSVFYYEILN  D+AC++AKQAF+EAIA++DTLGEESYKDSTLIMQLLR+ LTL
Sbjct:    5 REENVYMANVAARAERYEEMVEFMEKVVAALD--TELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKKYRSQIENELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYYRYLAEFKTGTERKEAAENTLSAYKSAQDIANGELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIADVDTLGEESYKDSTLIMQLLRDNLTL 232          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 1433_CHLRE (14-3-3-like protein OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 4.657e-88
Identity = 166/230 (72.17%), Postives = 197/230 (85.65%), Query Frame = 3
Query:   99 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            RE+ VY+AKLAEQAERY+EMVE M+K V       EL+VEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE + NEEHV  +++YR+ VE+ELS +CASIL+LL+ +LIP+A+  ESKVFYLKMKGDYHRY+AEFK G +RK A E T+ +Y+AAQDIA  DL PTHPIRLGLALNFSVFYYEILN  ++AC +AKQAF+EAIAELD+LGEESYKDSTLIMQLLR+ LTL
Sbjct:    5 REECVYMAKLAEQAERYDEMVEEMKK-VAKLVHDQELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEEAKGNEEHVQRIRKYRTVVEEELSKICASILQLLDDHLIPTASTGESKVFYLKMKGDYHRYLAEFKTGADRKEAAEHTLLAYKAAQDIALVDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLGEESYKDSTLIMQLLRDNLTL 233          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 1433_DICDI (14-3-3-like protein OS=Dictyostelium discoideum GN=fttB PE=1 SV=2)

HSP 1 Score: 311.612 bits (797), Expect = 3.124e-84
Identity = 158/232 (68.10%), Postives = 192/232 (82.76%), Query Frame = 3
Query:   93 LTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            +TRE+ VY+AKLAEQAERYEEMVE M+K+   +    ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE + NE HV  +KEY+ KVEKEL+D+C  IL +LE++LI S+ + ESKVFY KMKGDY RY+AEF  G+ RK + E ++ +Y+AA DIA  +L PTHPIRLGLALNFSVFYYEILN  D+AC++AK AF++AIAELDTL E+SYKDSTLIMQLLR+ LTL
Sbjct:    1 MTREENVYMAKLAEQAERYEEMVEAMKKV---AELDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESKGNENHVKKIKEYKCKVEKELTDICNDILEVLESHLIVSSASGESKVFYYKMKGDYFRYLAEFATGNPRKTSAESSLIAYKAASDIAVTELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKTAFDDAIAELDTLSEDSYKDSTLIMQLLRDNLTL 229          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 1433E_DROME (14-3-3 protein epsilon OS=Drosophila melanogaster GN=14-3-3epsilon PE=1 SV=2)

HSP 1 Score: 309.301 bits (791), Expect = 1.550e-83
Identity = 158/230 (68.70%), Postives = 189/230 (82.17%), Query Frame = 3
Query:   99 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            RE  VY AKLAEQAERY+EMVE M+K+   ++   ELTVEERNLLSVAYKNVIG+ RA+WRI++SIEQKEE +  EE + ++K YR +VEKEL D+C+ IL +LE +LIP AT+ ESKVFY KMKGDYHRY+AEF  G +RK A E+++ +Y+AA DIA  DL PTHPIRLGLALNFSVFYYEILN  D+AC +AK AF++AIAELDTL EESYKDSTLIMQLLR+ LTL
Sbjct:    4 RENNVYKAKLAEQAERYDEMVEAMKKV---ASMDVELTVEERNLLSVAYKNVIGARRASWRIITSIEQKEENKGAEEKLEMIKTYRGQVEKELRDICSDILNVLEKHLIPCATSGESKVFYYKMKGDYHRYLAEFATGSDRKDAAENSLIAYKAASDIAMNDLPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTL 230          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: RAD24_SCHPO (DNA damage checkpoint protein rad24 OS=Schizosaccharomyces pombe GN=rad24 PE=1 SV=2)

HSP 1 Score: 307.375 bits (786), Expect = 5.891e-83
Identity = 158/231 (68.40%), Postives = 192/231 (83.12%), Query Frame = 3
Query:   96 TREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            +RE  VYLAKLAEQAERYE MVE M+   V ST   ELTVEERNLLSVAYKNVIG+ RA+WRIVSSIEQKEE + N   V L+KEYR K+E+EL  +C  IL +LE +LIP+A ++ESKVFY KMKGDY+RY+AEF +G++R+ + + +++ Y+AA +IA A+LAPTHPIRLGLALNFSVFYYEILN  D+AC +AKQAF+EAI+ELD+L EESYKDSTLIMQLLR+ LTL
Sbjct:    5 SREDAVYLAKLAEQAERYEGMVENMKS--VASTDQ-ELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKGNTAQVELIKEYRQKIEQELDTICQDILTVLEKHLIPNAASAESKVFYYKMKGDYYRYLAEFAVGEKRQHSADQSLEGYKAASEIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACYLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTL 232          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 1433B_VICFA (14-3-3-like protein B OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.312e-82
Identity = 152/230 (66.09%), Postives = 190/230 (82.61%), Query Frame = 3
Query:   99 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            RE +VY+AKLAEQAERYEEMV+ M+ +   +    ELT+EERNLLSV YKNVIG+ RA+WRI+SSIEQKEE + N+ +   +KEYR KVE ELS++C  ++R+++ +LIPSA A ES VFY KMKGDY+RY+AEFK G+E+K AG+ +M++YE+A   A A+L PTHPIRLGLALNFSVFYYEILN  ++AC +AKQAF+EAI+ELDTL EESYKDSTLIMQLLR+ LTL
Sbjct:    7 RENFVYIAKLAEQAERYEEMVDSMKNV---ANLDVELTIEERNLLSVGYKNVIGARRASWRILSSIEQKEESKGNDVNAKRIKEYRHKVETELSNICIDVMRVIDEHLIPSAAAGESTVFYYKMKGDYYRYLAEFKTGNEKKEAGDQSMKAYESATTAAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTL 233          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 1433D_SOYBN (14-3-3-like protein D OS=Glycine max GN=GF14D PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.714e-82
Identity = 155/230 (67.39%), Postives = 189/230 (82.17%), Query Frame = 3
Query:   99 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            RE +VY+AKLAEQAERYEEMVE M+ +   +    ELTVEERNLLSV YKNVIG+ RA+WRI+SSIEQKEE + NE +   +KEYR KVE ELS++C  ++R+++ +LIPSA A ES VFY KMKGDY+RY+AEFK G+E+K A + +M++YE+A   A ADL PTHPIRLGLALNFSVFYYEILN  ++AC +AKQAF+EAI+ELDTL EESYKDSTLIMQLLR+ LTL
Sbjct:    7 RENFVYIAKLAEQAERYEEMVESMKNV---ANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEETKGNELNAKRIKEYRQKVELELSNICNDVMRVIDEHLIPSAAAGESTVFYYKMKGDYYRYLAEFKSGNEKKEAADQSMKAYESATAAAEADLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTL 233          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: 1433_TRIHA (14-3-3 protein homolog OS=Trichoderma harzianum PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.924e-82
Identity = 154/229 (67.25%), Postives = 189/229 (82.53%), Query Frame = 3
Query:  102 EQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            E  VYLAKLAEQAERYEEMVE M+   + ++   +LTVEERNLLSVAYKNVIG+ RA+WRIV+SIEQKEE + N   V+L+KEYR K+E EL+ +C  IL +L+ +LIPSA + ESKVFY K+KGDYHRY+AEF IGD RK + + ++++Y+AA ++A  +L PTHPIRLGLALNFSVFYYEILN  D+AC +AKQAF++AIAELDTL EESYKDSTLIMQLLR+ LTL
Sbjct:    4 EDAVYLAKLAEQAERYEEMVENMK---IVASEDRDLTVEERNLLSVAYKNVIGARRASWRIVTSIEQKEESKGNSSQVTLIKEYRQKIENELAKICDDILEVLDQHLIPSAKSGESKVFYHKIKGDYHRYLAEFAIGDRRKDSADKSLEAYKAATEVAQTELPPTHPIRLGLALNFSVFYYEILNAPDQACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTL 229          
BLAST of CB293984 vs. ExPASy Swiss-Prot
Match: BMH2_YEAST (Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 PE=1 SV=3)

HSP 1 Score: 303.523 bits (776), Expect = 8.506e-82
Identity = 157/232 (67.67%), Postives = 188/232 (81.03%), Query Frame = 3
Query:   96 TREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEH-VSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAGEDTMQSYEAAQDIAGADLAPTHPIRLGLALNFSVFYYEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLREYLTL 788
            TRE  VYLAKLAEQAERYEEMVE M+ +   ++   EL+VEERNLLSVAYKNVIG+ RA+WRIVSSIEQKEE ++  EH V L++ YRSK+E EL+ +   IL +L+++LIPSAT  ESKVFY KMKGDYHRY+AEF  GD R+ A   ++++Y+ A +IA  +L PTHPIRLGLALNFSVFYYEI N  DKAC +AKQAF++AIAELDTL EESYKDSTLIMQLLR+ LTL
Sbjct:    4 TREDSVYLAKLAEQAERYEEMVENMKAV---ASSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKEKSEHQVELIRSYRSKIETELTKISDDILSVLDSHLIPSATTGESKVFYYKMKGDYHRYLAEFSSGDAREKATNSSLEAYKTASEIATTELPPTHPIRLGLALNFSVFYYEIQNSPDKACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTL 232          
The following BLAST results are available for this feature:
BLAST of CB293984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433A_TOBAC1.601e-8871.3014-3-3-like protein A OS=Nicotiana tabacum PE=2 SV... [more]
14332_SOLTU2.730e-8870.0014-3-3-like protein RA215 OS=Solanum tuberosum PE=... [more]
1433_CHLRE4.657e-8872.1714-3-3-like protein OS=Chlamydomonas reinhardtii P... [more]
1433_DICDI3.124e-8468.1014-3-3-like protein OS=Dictyostelium discoideum GN... [more]
1433E_DROME1.550e-8368.7014-3-3 protein epsilon OS=Drosophila melanogaster ... [more]
RAD24_SCHPO5.891e-8368.40DNA damage checkpoint protein rad24 OS=Schizosacch... [more]
1433B_VICFA1.312e-8266.0914-3-3-like protein B OS=Vicia faba PE=2 SV=1[more]
1433D_SOYBN1.714e-8267.3914-3-3-like protein D OS=Glycine max GN=GF14D PE=2... [more]
1433_TRIHA2.924e-8267.2514-3-3 protein homolog OS=Trichoderma harzianum PE... [more]
BMH2_YEAST8.506e-8267.67Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_04af04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_04af04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293984 ID=CB293984; Name=CB293984; organism=Citrus sinensis; type=EST; length=790bp
GCCCGATGCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTATCACACTT
TCAGAGCCTGTGAAAAAGATGGCGACAACAGTTCCGGACCACCTGACGAG
AGAGCAGTACGTGTACTTAGCCAAGCTAGCCGAGCAAGCCGAGCGTTACG
AAGAGATGGTGGAGTTCATGCAGAAGCTGGTTGTCGGCTCGACTCCAGCC
GCCGAGCTGACGGTCGAGGAGCGAAACCTCCTCTCAGTGGCCTACAAGAA
CGTAATCGGCTCACTCCGCGCCGCGTGGCGCATCGTGTCGTCGATCGAGC
AGAAGGAGGAGGGGAGGAAGAACGAGGAACACGTGTCGCTCGTGAAAGAG
TACAGATCGAAGGTGGAGAAGGAGCTTTCGGATGTGTGCGCGAGTATTTT
GAGGTTGTTGGAAGCGAATTTGATTCCGTCGGCTACGGCGAGTGAGTCGA
AAGTGTTTTATTTGAAAATGAAGGGAGATTATCATCGTTACATGGCCGAG
TTTAAGATTGGCGATGAGCGGAAAGCCGCCGGTGAAGACACTATGCAATC
TTACGAAGCTGCTCAGGATATTGCTGGGGCTGATCTCGCGCCGACGCATC
CGATAAGGCTGGGATTAGCTCTCAATTTCTCGGTGTTTTACTACGAGATT
CTCAATCAATCTGATAAGGCATGCAGCATGGCTAAGCAGGCATTTGAGGA
AGCAATTGCTGAGCTAGACACTTTGGGAGAAGAATCCTACAAGGACAGCA
CCCTCATTATGCAACTCCTAAGGGAGTACCTCACTCTTTG
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