CB293990

Overview
NameCB293990
Unique NameCB293990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length764
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293990 vs. ExPASy Swiss-Prot
Match: GALP_ECOL6 (Galactose-proton symporter OS=Escherichia coli O6 GN=galP PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.850e-15
Identity = 49/167 (29.34%), Postives = 88/167 (52.69%), Query Frame = 1
Query:  262 LASMTSI*LGYDIGVMSGAALYIKDDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGIGVGYALVIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLSWRMMLGIGAIPSVLL 762
            LA++  +  G DIGV++GA  +I D+ +++    E ++  +   + +G++ +G  S  +GR+ +++                 N   L+  R + G+ VG A   AP+Y +E++P   RG + S  ++ I  GIL  Y+S+  FS      +WR MLG+  IP++LL
Sbjct:   21 LAALAGLLFGLDIGVIAGALPFIADEFQITSHTQEWVVSSMMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAAPNVEVLILSRVLLGLAVGVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLSDTAFSYTG---AWRWMLGVIIIPAILL 184          
BLAST of CB293990 vs. ExPASy Swiss-Prot
Match: HXT10_YEAST (Hexose transporter HXT10 OS=Saccharomyces cerevisiae GN=HXT10 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.567e-15
Identity = 51/176 (28.98%), Postives = 82/176 (46.59%), Query Frame = 1
Query:  250 GAAILASMTSI*LGYDIGVMSG-----------AALYIKDDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTN--YAFLMGGRFVAGIGVGYALVIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLSWRMMLGI 738
            G  ++ +      G+D G +SG             L      ++SD +  +++GI NI   +G L  GR  D  GR+  ++                ++  Y + +G R V+G+GVG   V++P   +E+SP   RG   SF ++ I  GI LGY +NYG  K    + WR+ LG+
Sbjct:   51 GLCLMIAFGGFIFGWDTGTISGFINQTDFKRRFGELQRDGSFQLSDVRTGLIVGIFNIGCALGGLTLGRLGDIYGRKIGLMCVILVYVVGIVIQIASSDKWYQYFIG-RIVSGMGVGGVAVLSPTLISEISPKHLRGTCVSFYQLMITLGIFLGYCTNYGTKKYSNSIQWRVPLGL 225          
BLAST of CB293990 vs. ExPASy Swiss-Prot
Match: YD387_YEAST (Probable metabolite transport protein YDR387C OS=Saccharomyces cerevisiae GN=YDR387C PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.120e-14
Identity = 51/169 (30.18%), Postives = 84/169 (49.70%), Query Frame = 1
Query:  265 ASMTSI*LGYDIGVMSGAALYIK-DDLKV---SDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGIGVGYALVIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLSWRMMLGIGAIPSVL 759
            A++  +  GYD GV+SG  L +K +DL +   +D + E++    ++ S  GS+ A   +D  GRR T+                     FL+ GR + GI VG +    P++ +E+SP+  RGF+ +   + I GG L+ YV         +  SWR +  + AIP++L
Sbjct:   46 ATIGGLLFGYDTGVISGVLLSLKPEDLSLVVLTDVQKELITSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRGFMLTLNIIAITGGQLVSYV--IASLMKEIDNSWRYLFALSAIPAIL 212          
BLAST of CB293990 vs. ExPASy Swiss-Prot
Match: ITR1_SCHPO (Myo-inositol transporter 1 OS=Schizosaccharomyces pombe GN=itr1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.559e-14
Identity = 54/208 (25.96%), Postives = 97/208 (46.63%), Query Frame = 1
Query:  139 MAAGLGTESNNNTDPQNQKTLADFDPQKKPKRNLYASGAAILASMTSI*LGYDIGVMSGAALYIKDDL---KVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGIGVGYALVIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLSWRMMLGIGAIPS 753
            ++ G  + SN+N        L D    +   + ++    A  A +  +  GYD GV+SGA + I   L   ++++   E +    ++ +L+G + AG  +D+ GR+  I                  +   ++ GRFV G GVG A +I P+Y +E++P+  RG L     + I  G ++ Y  +  F    +H  WR M+G+  +P+
Sbjct:   54 LSNGARSRSNSNISLSEPHALNDTVEDQPVSKWVWV--LAFAAGIGGLLFGYDTGVISGALVVIGTSLGGHELTNGGKEFITSATSLGALLGGIIAGALADFFGRKPVIAIASIIIIVGSIVQVTAHHLWHMIVGRFVIGWGVGIASLIIPLYLSEIAPSKIRGRLVIIYVLLITAGQVIAYGIDTAFEH--VHNGWRWMVGLAMVPA 257          
BLAST of CB293990 vs. ExPASy Swiss-Prot
Match: ITR2_YEAST (Myo-inositol transporter 2 OS=Saccharomyces cerevisiae GN=ITR2 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 7.261e-14
Identity = 49/172 (28.49%), Postives = 85/172 (49.42%), Query Frame = 1
Query:  262 LASMTSI*LGYDIGVMSGAALYIKDDLKVSDTKI------EILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGIGVGYALVIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLSWRMMLGIGAIPSVL 759
            +AS++    GYD G +S A + I  DL   D K+      E++    ++ +LI S+ AG  +D  GRR  ++                  +  +  GR + G GVG   +I+P++ +E++P   RG LT    +++ GG L+ Y    G +   +   WR+++G+  IP+VL
Sbjct:  115 VASISGFMFGYDTGYISSALISINRDL---DNKVLTYGEKELITAATSLGALITSVGAGTAADVFGRRPCLMFSNLMFLIGAILQITAHKFWQMAAGRLIMGFGVGIGSLISPLFISEIAPKMIRGRLTVINSLWLTGGQLIAYGCGAGLNH--VKNGWRILVGLSLIPTVL 281          
BLAST of CB293990 vs. ExPASy Swiss-Prot
Match: ERDL4_ARATH (Sugar transporter ERD6-like 4 OS=Arabidopsis thaliana GN=At1g19450 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.261e-14
Identity = 43/168 (25.60%), Postives = 86/168 (51.19%), Query Frame = 1
Query:  259 ILASMTSI*LGYDIGVMSGAALYIKDDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGIGVGYALVIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLSWRMMLGIGAIPSVLL 762
            ++ ++  I  G+  G  S     I  DL ++ ++  +   + N+ +++G++A+G+ ++++GR+ +++                 + +FL  GR + G GVG      PVY AE++P + RG L S  ++ +  GI+L Y+       L L + WR++  +G +P  LL
Sbjct:   54 LIVALGPIQFGFTCGYSSPTQAAITKDLGLTVSEYSVFGSLSNVGAMVGAIASGQIAEYVGRKGSLMIAAIPNIIGWLSISFAKDTSFLYMGRLLEGFGVGIISYTVPVYIAEIAPQTMRGALGSVNQLSVTIGIMLAYL-------LGLFVPWRILAVLGVLPCTLL 214          
BLAST of CB293990 vs. ExPASy Swiss-Prot
Match: ERDL6_ARATH (Sugar transporter ERD6-like 6 OS=Arabidopsis thaliana GN=At1g75220 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.483e-14
Identity = 44/168 (26.19%), Postives = 86/168 (51.19%), Query Frame = 1
Query:  259 ILASMTSI*LGYDIGVMSGAALYIKDDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGIGVGYALVIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLSWRMMLGIGAIPSVLL 762
            ++ ++  I  G+  G  S     I  DL ++ ++  +   + N+ +++G++A+G+ +++IGR+ +++                 + +FL  GR + G GVG      PVY AE++P + RG L S  ++ +  GI+L Y+       L L + WR++  +G +P  LL
Sbjct:   53 LIVALGPIQFGFTCGYSSPTQAAITKDLGLTVSEYSVFGSLSNVGAMVGAIASGQIAEYIGRKGSLMIAAIPNIIGWLCISFAKDTSFLYMGRLLEGFGVGIISYTVPVYIAEIAPQNMRGGLGSVNQLSVTIGIMLAYL-------LGLFVPWRILAVLGILPCTLL 213          
BLAST of CB293990 vs. ExPASy Swiss-Prot
Match: IOLT_BACSU (Major myo-inositol transporter iolT OS=Bacillus subtilis GN=iolT PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.238e-13
Identity = 53/172 (30.81%), Postives = 84/172 (48.84%), Query Frame = 1
Query:  259 ILASMTSI*LGYDIGVMSGAALYI--KDDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGIGVGYALVIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSN--YGFSKLPLHLSWRMMLGIGAIPSVLL 762
            ++++   +  GYD GV++GA  Y+   D L ++     ++   L   + +G++  GR SD+ GRR  I+                 N   ++  RFV GI VG A V  P Y AE+SP  +RG + +  E+ I  G LL +V N   G +       WR ML I ++P++ L
Sbjct:   16 LVSTFGGLLFGYDTGVLNGALPYMGEPDQLNLNAFTEGLVTSSLLFGAALGAVFGGRMSDFNGRRKNILFLAVIFFISTIGCTFAPNVTVMIISRFVLGIAVGGASVTVPAYLAEMSPVESRGRMVTQNELMIVSGQLLAFVFNAILGTTMGDNSHVWRFMLVIASLPALFL 187          
BLAST of CB293990 vs. ExPASy Swiss-Prot
Match: GTR10_HUMAN (Solute carrier family 2, facilitated glucose transporter member 10 OS=Homo sapiens GN=SLC2A10 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.617e-13
Identity = 53/171 (30.99%), Postives = 80/171 (46.78%), Query Frame = 1
Query:  247 SGAAILASMTSI*LGYDIGVMSGAALYIKDDLKVSDTKIEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGIGVGYALVIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLSWRMMLGIGAIPSVL 759
            +  ++L  +T    GY++ V+SGA L ++ D  +S  + E L+G L + +L+ SL  G   D  GR+  I+                 + A+L+ GR V G  +  + +   +Y +EL     RG L S  E  I  GILL Y  NY  +  P    WR M G    P+VL
Sbjct:   12 ASVSLLGGLT---FGYELAVISGALLPLQLDFGLSCLEQEFLVGSLLLGALLASLVGGFLIDCYGRKQAILGSNLVLLAGSLTLGLAGSLAWLVLGRAVVGFAISLSSMACCIYVSELVGPRQRGVLVSLYEAGITVGILLSYALNYALAGTP--WGWRHMFGWATAPAVL 177          
BLAST of CB293990 vs. ExPASy Swiss-Prot
Match: STP9_ARATH (Sugar transport protein 9 OS=Arabidopsis thaliana GN=STP9 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.112e-13
Identity = 50/188 (26.60%), Postives = 90/188 (47.87%), Query Frame = 1
Query:  259 ILASMTSI*LGYDIGVMSGAA--------LYIKDDLKVSDTK------------IEILMGILNIYSLIGSLAAGRTSDWIGRRYTIVXXXXXXXXXXXXXXXXTNYAFLMGGRFVAGIGVGYALVIAPVYTAELSPASTRGFLTSFPEVFINGGILLGYVSNYGFSKLPLHLSWRMMLGIGAIPSVLL 762
            I+A+M  +  GYD+G+  G           + + D ++ + +            +++    L + +L  S  A   +   GR+ ++                 TN A L+ GR + G+GVG+A    PVY +E++PA  RG L    ++ I  GIL+  + NYG S++  +  WR+ LG+ A+P+V++
Sbjct:   30 IVAAMGGLLFGYDLGISGGVTSMEEFLSKFFPEVDKQMHEARRETAYCKFDNQLLQLFTSSLYLAALASSFVASAVTRKYGRKISMFVGGVAFLIGSLFNAFATNVAMLIVGRLLLGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQMAITIGILIANLINYGTSQMAKN-GWRVSLGLAAVPAVIM 216          
The following BLAST results are available for this feature:
BLAST of CB293990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
GALP_ECOL63.850e-1529.34Galactose-proton symporter OS=Escherichia coli O6 ... [more]
HXT10_YEAST6.567e-1528.98Hexose transporter HXT10 OS=Saccharomyces cerevisi... [more]
YD387_YEAST1.120e-1430.18Probable metabolite transport protein YDR387C OS=S... [more]
ITR1_SCHPO5.559e-1425.96Myo-inositol transporter 1 OS=Schizosaccharomyces ... [more]
ITR2_YEAST7.261e-1428.49Myo-inositol transporter 2 OS=Saccharomyces cerevi... [more]
ERDL4_ARATH7.261e-1425.60Sugar transporter ERD6-like 4 OS=Arabidopsis thali... [more]
ERDL6_ARATH9.483e-1426.19Sugar transporter ERD6-like 6 OS=Arabidopsis thali... [more]
IOLT_BACSU1.238e-1330.81Major myo-inositol transporter iolT OS=Bacillus su... [more]
GTR10_HUMAN1.617e-1330.99Solute carrier family 2, facilitated glucose trans... [more]
STP9_ARATH2.112e-1326.60Sugar transport protein 9 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_05ad01_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05ad01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293990 ID=CB293990; Name=CB293990; organism=Citrus sinensis; type=EST; length=764bp
GCACGTGTGGCTTCTTGTTTTTGTAGTAGTTTCATGGCAGCTTGAGTTTC
TATCTCTTCTTCCAAACCCTAGCTTACATAATTAAACACTCGCAGTCTCT
CTCTCTCTCGCTCTCTAGCTAGCTAGCTTAGCAACAACATGGCTGCAGGC
TTGGGAACCGAGAGCAACAACAATACTGACCCTCAAAACCAAAAAACTCT
TGCGGATTTTGATCCCCAAAAGAAACCAAAAAGAAATCTGTATGCCTCCG
GCGCTGCCATTTTGGCTTCCATGACTTCAATCTGACTAGGTTATGACATT
GGAGTAATGAGTGGAGCTGCACTCTACATCAAAGACGACTTGAAAGTCAG
TGACACAAAAATCGAGATCTTAATGGGAATCTTGAATATTTACTCACTCA
TCGGCTCACTGGCTGCCGGCAGAACCTCCGACTGGATTGGCCGCCGGTAC
ACTATCGTGTTAGCCGGGGCCATCTTCTTCGCCGGAGCGCTGCTCATGGG
GTTCGCCACAAACTACGCTTTCCTCATGGGGGGTCGCTTCGTCGCCGGTA
TCGGCGTCGGATACGCTCTCGTGATCGCTCCCGTTTACACAGCTGAACTT
TCTCCGGCTTCTACTCGAGGCTTTCTCACCTCATTTCCTGAGGTTTTCAT
TAACGGCGGGATATTACTTGGCTACGTCTCGAACTACGGATTCTCCAAAC
TACCCCTCCACTTAAGCTGGCGCATGATGCTCGGAATCGGCGCCATTCCG
TCGGTGCTTCTCGC
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