CB293991
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U4972_SORBI (UPF0497 membrane protein Sb02g009660 OS=Sorghum bicolor GN=Sb02g009660 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.232e-27 Identity = 65/146 (44.52%), Postives = 86/146 (58.90%), Query Frame = -3 Query: 310 RENYFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIP-IRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYCRHIGSA 744 R ++ G D+ LR LLF+ TL +IV+ATAKQT + IP + VS AKF SPA IY + A V C YS++T L SL ++S + K L L DV+ +IGLKGN+H+ WTKICN+Y +CRHIGS+ Sbjct: 30 RSSFSGADLALRALLFAVTLAGLIVLATAKQTVSIPVPEIPGLLVSRPAKFNHSPALIYLLVAQCVTCFYSLLTALTSLKLISGSSPTKTLFL-LVLLDVLYAAIMASATGSAGGVAWIGLKGNTHTNWTKICNIYGNFCRHIGSS 174
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U4974_MAIZE (UPF0497 membrane protein 4 OS=Zea mays PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.535e-25 Identity = 65/165 (39.39%), Postives = 90/165 (54.55%), Query Frame = -3 Query: 310 GTHTMASEAPAKYEDQRAVRENYFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIP-IRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYCRHIGSA 801 G+ AP+ A + G D+ LRVLLF+ TL ++V+ATA+QT V IP + +S+ AKF DSPA IY + AL V C YS+++ + + +S R L +DV +IGLKGNSH+ W KICN+Y K+CRHIGS+ Sbjct: 11 GSGKQTDAAPSPPAAAAAACRSLSGADLALRVLLFAVTLSGLVVLATAEQTVRVPVPQIPGLVLSLPAKFKDSPALIYLLVALCVTCFYSLLSTAFTSLKLLFGSSPSRTLFLLVLFDVFYAAIMASATGSAGGVAWIGLKGNSHTNWNKICNIYGKFCRHIGSS 175
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U4971_PICSI (UPF0497 membrane protein 1 OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.636e-20 Identity = 48/139 (34.53%), Postives = 80/139 (57.55%), Query Frame = -3 Query: 322 NYFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYCRH 738 ++F +D LR+L+ +T + IVM T KQT + +PI + AK+ SPAF++FV A +VAC Y++++++ S+ K S + + D+VM+ Y+G KGNSH++W K+C +YD++C H Sbjct: 36 SFFVVDFSLRLLVIGSTFTAAIVMGTNKQTAI-----LPIVGPLSAKYQYSPAFVFFVIANAVACGYTLLSLI--FSITGKFTSTPLSVFLLSVTDLVMVALVSAGVSAAAAIAYVGYKGNSHTQWGKVCGIYDRFCHH 167
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U497B_SOYBN (UPF0497 membrane protein 11 OS=Glycine max PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.476e-17 Identity = 53/145 (36.55%), Postives = 83/145 (57.24%), Query Frame = -3 Query: 301 DVGLRVLLFSATLVSVIVMATAKQTELV----SPAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYCRHIGSATGV 723 D+ LR+L F+ TLV+ IV+A KQT+LV S + P+ V + AK+ AF+YF+ ++AC Y+ +++L L++V++ S K L A D M+ G +G KGNSH W K+CNV+ K+C + ++ GV Sbjct: 24 DLLLRLLAFTVTLVAAIVIAVDKQTKLVPIQLSDSFPPLNVPLTAKWHQMSAFVYFLVTNAIACTYAAMSLL--LALVNRGKS-KGLWTLIAVLDTFMVALLFSGNGAAAAVGILGYKGNSHVNWNKVCNVFGKFCDQMAASIGV 165
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U497A_SOYBN (UPF0497 membrane protein 10 OS=Glycine max PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.901e-16 Identity = 51/145 (35.17%), Postives = 83/145 (57.24%), Query Frame = -3 Query: 301 DVGLRVLLFSATLVSVIVMATAKQTELV----SPAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYCRHIGSATGV 723 D+ LR+L F+ TLV+ IV+A KQT++V S + P+ V + AK+ A +YF+ ++AC Y+++++L L++V++ S K L A D M+ G +G KGNSH W K+CNV+ K+C + ++ GV Sbjct: 23 DLLLRLLAFTVTLVAAIVIAVDKQTKVVPIQLSDSLPPLDVPLTAKWHQMSAIVYFLVTNAIACTYAVLSLL--LALVNRGKS-KGLWTLIAVLDAFMVALLFSGNGAAAAVGVLGYKGNSHVNWNKVCNVFGKFCDQMAASIGV 164
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U4974_VITVI (UPF0497 membrane protein 4 OS=Vitis vinifera GN=GSVIVT00019813001 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.440e-15 Identity = 50/145 (34.48%), Postives = 78/145 (53.79%), Query Frame = -3 Query: 301 DVGLRVLLFSATLVSVIVMATAKQTELVS----PAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYCRHIGSATGV 723 D+ LRV+ + TLV+ +++ KQT++VS P P+ V V AK+ AF+YFV + ++AC Y+ +++L S V K L L D+VM+ G +G +GNS RW K+CNV+ K+C + A G+ Sbjct: 31 DLVLRVVALALTLVAAVLLGVDKQTKVVSLQLLPTLPPMDVPVTAKWRYLSAFVYFVVSNAIACSYAALSLLLS---VGNSKGNKGLGLAITVMDLVMVALLFSSNGAAGAIGLMGYEGNSRVRWGKVCNVFGKFCNQVAVALGL 172
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U4975_MAIZE (UPF0497 membrane protein 5 OS=Zea mays PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.050e-14 Identity = 48/144 (33.33%), Postives = 73/144 (50.69%), Query Frame = -3 Query: 310 GIDVGLRVLLFSATLVSVIVMATAKQTEL----VSPAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYCRHIGSA 729 G V LRV + +ATLVS +VM +QT V+ A P+ V + A ++ S AF+YFV A ++ CL+S + A S + ++ D++ L G +G +GNSH RW K+CNVY ++C +A Sbjct: 56 GCSVALRVFVLAATLVSAVVMGVDRQTSTIRITVTDALPPLEVPLTANWSYSSAFVYFVVANAMVCLFSAAALAACRS--------RAAMVPVMVGDLLALALLYSAVGAAAEFGILGERGNSHVRWPKVCNVYGRFCERAMAA 191
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U497Q_ARATH (UPF0497 membrane protein At4g15620 OS=Arabidopsis thaliana GN=At4g15620 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.901e-14 Identity = 42/138 (30.43%), Postives = 77/138 (55.80%), Query Frame = -3 Query: 328 GIDVGLRVLLFSATLVSVIVMATAKQTELVS----PAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYC 729 G+++ +RVL T+ + V+ AKQT++VS P P+ ++ AK + AF+Y ++ ++AC Y+ I++ ++ ++S+ +K+LL+ D+VM+ G +GL GN H W K+C V+ K+C Sbjct: 26 GVELTMRVLALILTMAAATVLGVAKQTKVVSIKLIPTLPPLDITTTAKASYLSAFVYNISVNAIACGYTAISI--AILMISRGRRSKKLLMVVLLGDLVMVALLFSGTGAASAIGLMGLHGNKHVMWKKVCGVFGKFC 161
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U497R_ARATH (UPF0497 membrane protein At4g15630 OS=Arabidopsis thaliana GN=At4g15630 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.032e-13 Identity = 44/147 (29.93%), Postives = 78/147 (53.06%), Query Frame = -3 Query: 301 GIDVGLRVLLFSATLVSVIVMATAKQTELVS----PAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYCRHIGSATGV 729 G+++ +RVL T+V+ V+ AKQT++V P P+ VS AK + AF+Y ++A ++AC Y+ I+++ + ++SK +K LL+ D++M+ G +G GN H W K+C V+ K+C + + Sbjct: 26 GLELTMRVLALVLTMVAATVLGVAKQTKVVPIKLIPTLPPLNVSTTAKASYLSAFVYNISANAIACGYTAISIV--IVMISKGKRSKSLLMAVLIGDLMMVALLFSSTGAAGAIGLMGRHGNKHVMWKKVCGVFGKFCNQAAVSVAI 170
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U4975_VITVI (UPF0497 membrane protein 5 OS=Vitis vinifera GN=GSVIVT00035198001 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.032e-13 Identity = 46/139 (33.09%), Postives = 76/139 (54.68%), Query Frame = -3 Query: 310 LRVLLFSATLVSVIVMATAKQTE--LVSPAGI-PIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRL-LLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYCRHIGSA 714 LRV+ F AT + IVM ++T+ LV G PIR ++KAKF +PAF++FV A +A +Y+++ + + V + K L L+ + D+V++ +G GNSH++W KIC+ ++ +C G A Sbjct: 33 LRVVAFLATASATIVMGLNQETKTLLVGTIGTTPIRATLKAKFQHTPAFVFFVVANGLASVYNLV--MLGVDVFGRKLDCKGLRLVIISILDMVIVAVVAAGASSAAFMAELGKNGNSHAKWNKICDKFESFCHQGGGA 169 The following BLAST results are available for this feature:
BLAST of CB293991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293991 ID=CB293991; Name=CB293991; organism=Citrus sinensis; type=EST; length=806bpback to top |