CB293991
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U4973_SORBI (UPF0497 membrane protein Sb03g014480 OS=Sorghum bicolor GN=Sb03g014480 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.032e-13 Identity = 47/146 (32.19%), Postives = 74/146 (50.68%), Query Frame = -3 Query: 328 RAVRENYFGIDVGLRVLLFSATLVSVIVMATAKQTELV----SPAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYC 753 RA + G V LRV + ++TLVS +VM +QT + + A P+ V + A ++ S AF+YFV A ++ CL+S + A S + ++ D++ L G +G +GNSH RW K+CNVY ++C Sbjct: 50 RAAQAPVDGCSVALRVFVVASTLVSAVVMGVDRQTRTIQITITDALPPLEVPLTANWSYSSAFVYFVVANAMVCLFSAAALAACRS--------RAAMVPVMVGDLLALALLYSAVGAAAEFGILGERGNSHVRWAKVCNVYGRFC 187
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U49B7_ARATH (UPF0497 membrane protein At5g44550 OS=Arabidopsis thaliana GN=At5g44550 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.946e-12 Identity = 46/136 (33.82%), Postives = 71/136 (52.21%), Query Frame = -3 Query: 322 VGLRVLLFSATLVSVIVMATAKQTE--LVSPAG-IPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYCRH 720 +GLR+L FSATL + IVM K+T+ +V G PI+ + AKF +PAF++FV A ++ ++++ M+A K LL A D++ + +G GN H+RW KIC+ + YC H Sbjct: 20 LGLRLLAFSATLSAAIVMGLNKETKTFIVGKVGNTPIQATFTAKFDHTPAFVFFVVANAMVSFHNLL-MIALQIFGGKMEFTGFRLLSVAILDMLNVTLISAAANAAAFMAEVGKNGNKHARWDKICDRFATYCDH 154
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U497T_ARATH (UPF0497 membrane protein At4g20390 OS=Arabidopsis thaliana GN=At4g20390 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.946e-12 Identity = 42/137 (30.66%), Postives = 73/137 (53.28%), Query Frame = -3 Query: 322 VGLRVLLFSATLVSVIVMATAKQTELVSPAGI---PIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRL-LLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYCRH 720 +GLR+ F ATL + IVM+ K+T+ + A I PI+ ++ AKF +PAF++FV A + ++++ ++ + + S+ K L LL A D++ +G GN H++W K+C+ + YC H Sbjct: 20 LGLRIFAFMATLAAAIVMSLNKETKTLVVATIGTVPIKATLTAKFQHTPAFVFFVIANVMVSFHNLLMIV--VQIFSRKLEYKGLRLLSIAILDMLNATLVSAAANAAVFVAELGKNGNKHAKWNKVCDRFTTYCDH 154
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U497E_SORBI (UPF0497 membrane protein Sb06g018970 OS=Sorghum bicolor GN=Sb06g018970 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.542e-12 Identity = 49/145 (33.79%), Postives = 72/145 (49.66%), Query Frame = -3 Query: 304 DVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIR---VSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKP-ASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYCRHI-GSATG 723 DV LR L AT+ S I M T +T +P + +AK++D P+F +FVAA +V C Y ++++ S+ + +P A RL+L F+D VML Y+ KGN + W IC +D +C I GS G Sbjct: 34 DVFLRFLSIVATIASAISMGTTNET-------LPFFTQFIQFEAKYSDLPSFTFFVAANAVVCTYLVLSIPLSIVHIIRPRARYSRLIL--VFFDAVMLALLTAGASAAAAIVYLAHKGNVRANWFAICQQFDSFCERISGSLIG 169
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U4978_VITVI (UPF0497 membrane protein 8 OS=Vitis vinifera GN=GSVIVT00018013001 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.320e-12 Identity = 42/139 (30.22%), Postives = 73/139 (52.52%), Query Frame = -3 Query: 319 YFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYCRHI 735 + G + LR+L +ATL + +M T+KQT V + V+AK++ S AF +F A ++AC S++T+ + S+ + ++ + F D+ M+ GY+G GN+H+ W IC+ +D+YC I Sbjct: 20 FLGAHICLRILTVTATLTAAWMMITSKQTVEV------YGIQVEAKYSYSSAFKFFSYANAIACGCSVLTLFPAFSLFYRGSTPMKFFFLFLH-DLCMMSLVLAGCAAATAIGYVGRYGNNHAGWMAICDQFDEYCNRI 151
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U4976_VITVI (UPF0497 membrane protein 6 OS=Vitis vinifera GN=GSVIVT00023588001 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.320e-12 Identity = 41/136 (30.15%), Postives = 72/136 (52.94%), Query Frame = -3 Query: 319 LRVLLFSATLVSVIVMATAKQTELVSPAGIP----IRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYCRHI 714 LR+L TL++ +V KQT+++ I + V V AK++D AF+Y V + ++AC Y+ I+++ ++++ + R+L D+ M+ G +G GNSH W K+CNV+D +C H+ Sbjct: 37 LRILGLLLTLIAAVVAGVDKQTKIIPLTLIKTLPSLHVPVTAKWSDMSAFVYLVVSNAIACSYAAISLVL-VTMLGRRGKGGRVLAVIVL-DLHMVGLLFSANGAATAVGVLGQYGNSHVEWKKVCNVFDSFCHHL 170
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U497E_SOYBN (UPF0497 membrane protein 14 OS=Glycine max PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.336e-12 Identity = 45/141 (31.91%), Postives = 73/141 (51.77%), Query Frame = -3 Query: 310 VGLRVLLFSATLVSVIVMATAKQTELVSPAGI---PIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLL-YFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYCRHIGSA 720 + LRV+ F AT + +VMA KQT+ + A I P+ +++ A F +PAFI+FV ++A Y+++ + + ++ K L L A DV+ + +G GNSH+RW KIC+ ++ YC G A Sbjct: 28 LSLRVVAFFATASATLVMAFNKQTKGMVVATIGTNPVTITLTAMFQHTPAFIFFVIVNAIASFYNLLVI--GVEILGPQYDYKGLRLGLIAILDVMTMALAATGDGAATFMAELGRNGNSHARWDKICDKFEAYCNRGGVA 166
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U497C_RICCO (UPF0497 membrane protein 12 OS=Ricinus communis GN=RCOM_0680180 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.336e-12 Identity = 47/153 (30.72%), Postives = 76/153 (49.67%), Query Frame = -3 Query: 310 QRAVRENYFGIDVGLRVLLFSATLVSVIVMATAKQTELV----SPAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYCRHIGSA 756 +R R N F + LRVL F T + IV QTE V + + P+ V V AK+ AF++FV + ++AC Y+ I+++ S K ++ D++M+ G +G KGNSH +W K+CNV+ K+C + ++ Sbjct: 22 ERGGRTNSFLV---LRVLAFVLTSTAAIVHGVNNQTETVPIQLTSSMPPLYVPVVAKWHYLSAFVFFVVSNAIACSYAAISVMLSF------CGKKSMVPIILTLDLLMVALLFSSNGAATAIGVMGYKGNSHVKWNKVCNVFGKFCNQVAAS 165
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U4971_ORYSJ (UPF0497 membrane protein Os04g0460400 OS=Oryza sativa subsp. japonica GN=Os04g0460400 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 7.395e-12 Identity = 47/166 (28.31%), Postives = 76/166 (45.78%), Query Frame = -3 Query: 304 MASEAPAKYEDQRAVRENYFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIR---VSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYCRHI-GSATG 789 ++S+AP V +D LR + T+ S I M T +T +P + +AK++D P+F +FVAA +V C Y ++++ S+ + +P A+ L+ F+D ML Y+ KGN + W IC +D +C I GS G Sbjct: 6 ISSKAPLVAPVAAGVNRAVAVVDTFLRFIAIIGTIGSAIAMGTTNET-------LPFFTQFIQFEAKYSDLPSFTFFVAANAVVCTYLVLSIPLSIVHILRP-RARYSRLFLVFFDTAMLALLTAGASAAAAIVYLAHKGNVRANWFSICQQFDSFCERISGSLIG 163
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U4971_ORYSI (UPF0497 membrane protein 1 OS=Oryza sativa subsp. indica GN=H0219H12.8 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.395e-12 Identity = 47/166 (28.31%), Postives = 76/166 (45.78%), Query Frame = -3 Query: 304 MASEAPAKYEDQRAVRENYFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIR---VSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYCRHI-GSATG 789 ++S+AP V +D LR + T+ S I M T +T +P + +AK++D P+F +FVAA +V C Y ++++ S+ + +P A+ L+ F+D ML Y+ KGN + W IC +D +C I GS G Sbjct: 6 ISSKAPLVAPVAAGVNRAVAVVDTFLRFIAIIGTIGSAIAMGTTNET-------LPFFTQFIQFEAKYSDLPSFTFFVAANAVVCTYLVLSIPLSIVHILRP-RARYSRLFLVFFDTAMLALLTAGASAAAAIVYLAHKGNVRANWFSICQQFDSFCERISGSLIG 163 The following BLAST results are available for this feature:
BLAST of CB293991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293991 ID=CB293991; Name=CB293991; organism=Citrus sinensis; type=EST; length=806bpback to top |