CB293991
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U497F_RICCO (UPF0497 membrane protein 15 OS=Ricinus communis GN=RCOM_0770240 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.152e-11 Identity = 43/138 (31.16%), Postives = 71/138 (51.45%), Query Frame = -3 Query: 310 LRVLLFSATLVSVIVMATAKQTELVSPAGI---PIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYCRHIGSA 714 LR + F AT + IVMA ++T+ A I PI+ +V AKF +PAF++FV A + +++++ M+A + V K + A D++ +G GNSH++W KIC+ + +C H G+A Sbjct: 30 LRFVAFLATAAATIVMAANRETKTFVVATIGSTPIKATVTAKFQHTPAFVFFVIANGMGSIHNLV-MIAGDTFVRKFDYKGLRWVTVAILDMLTAALISGGVNAAVFMAELGKNGNSHAKWNKICDRFGSFCDHGGAA 166
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U4977_ORYSJ (UPF0497 membrane protein Os12g0610800 OS=Oryza sativa subsp. japonica GN=Os12g0610800 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.810e-11 Identity = 43/149 (28.86%), Postives = 74/149 (49.66%), Query Frame = -3 Query: 310 VRENYFGIDVGLRVLLFSATLVSVIVMATAKQ--TELVSPAGI-PIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYCRHIGSA 747 V++ + +R +F AT V+ ++M KQ T +V+ G P+ + AKF D+PAF++FV A ++A Y+++ ++ + + S LL D+V+L +G GN H+RW IC+ + +C H G A Sbjct: 21 VKDKLITLQPVVRACVFLATAVAAVIMGLNKQSYTTVVAIVGTRPVTQTFTAKFKDTPAFVFFVIANAIASGYNLMVLVTRRILQRRAQSLSVHLL-----DMVILTLLATGSATAASMAQLGKNGNLHARWNPICDKFGSFCNHGGIA 164
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U4974_ORYSJ (UPF0497 membrane protein Os06g0231050 OS=Oryza sativa subsp. japonica GN=Os06g0231050 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.670e-11 Identity = 52/169 (30.77%), Postives = 76/169 (44.97%), Query Frame = -3 Query: 304 HTMASEAPAKYEDQRAVRENYFGIDVGLRVLLFSATLVSVIVMATAKQTELVSPAGIPIR---VSVKAKFTDSPAFIYFVAALSVACLYSIITM-LASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYCRHI-GSATG 795 H S+AP R V + +DV LR + TL S I M T QT +P + KA+++D P +FV A S+ Y I+++ L+ + V+ A RL+L F +D ML Y+ KGN+ + W IC +D +C I GS G Sbjct: 7 HGETSKAPLS----RGVSKGVSILDVILRFVAIIGTLASAIAMGTTNQT-------LPFFTQFIRFKAQYSDLPTLTFFVVANSIVSAYLILSLPLSIVHVIRSRAKYSRLILIF--FDAAMLALVTAGASAAAAIVYLAHKGNARANWLAICQQFDSFCERISGSLIG 162
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U497A_ORYSJ (UPF0497 membrane protein Os01g0363300 OS=Oryza sativa subsp. japonica GN=Os01g0363300 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.794e-11 Identity = 47/145 (32.41%), Postives = 74/145 (51.03%), Query Frame = -3 Query: 301 VGLRVLLFSATLVSVIVMATAKQTELVSPAG-----IPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYCRHIGSATGV 720 V LRV + TL S +VMA +Q+ V A P+RV V AK+T S AF+YFV A ++ +S A+L+ V + ++ +++ D+V + G +G +GN+H RW K+C+VY +C +A V Sbjct: 53 VVLRVFVLLGTLASAVVMAADRQSTTVQIAAGEELAPPLRVPVTAKWTYSSAFVYFVVANAMVFAFSA----AALAAVRRRSAVVPVMV----GDLVAMALLFSAVGAAAQFGLLGERGNAHVRWAKVCDVYGPFCERAMAAVVV 189
BLAST of CB293991 vs. ExPASy Swiss-Prot
Match: U4979_VITVI (UPF0497 membrane protein 9 OS=Vitis vinifera GN=GSVIVT00018576001 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.177e-11 Identity = 43/135 (31.85%), Postives = 66/135 (48.89%), Query Frame = -3 Query: 310 LRVLLFSATLVSVIVMATAKQTELVSPAGIPIRVSVKAKFTDSPAFIYFVAALSVACLYSIITMLASLSVVSKPASAKRLLLYFAFWDVVMLXXXXXXXXXXXXXGYIGLKGNSHSRWTKICNVYDKYCRHIGSA 714 LR+L F ATL + IVMAT+ + + +S++AK++ +PAF YFV A ++ YS++ + P+ L A DVV+ Y+G KGNS++ W IC+ YC H+ A Sbjct: 13 LRLLAFGATLSAAIVMATSHERTTY------LSLSIEAKYSHTPAFKYFVIANAIGSAYSLLLLFL-------PSHGSLWPLVIAS-DVVITMFLTSSISAALSIAYVGKKGNSYAGWLPICDQVPNYCNHVTGA 133 The following BLAST results are available for this feature:
BLAST of CB293991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB293991 ID=CB293991; Name=CB293991; organism=Citrus sinensis; type=EST; length=806bpback to top |