CB293997

Overview
NameCB293997
Unique NameCB293997
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB293997 vs. ExPASy Swiss-Prot
Match: PPIA_PANPA (Peptidyl-prolyl cis-trans isomerase A OS=Pan paniscus GN=PPIA PE=3 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 5.282e-30
Identity = 63/112 (56.25%), Postives = 78/112 (69.64%), Query Frame = -1 
Query:  540 FHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENCKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRTIEAEGRQTGEPKSKVVISNSGEM 875
            FHRIIP FM Q           G+SI+GE F DEN  LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM++V  +E  G + G+   K+ I++ G++
Sbjct:   53 FHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CB293997 vs. ExPASy Swiss-Prot
Match: PPIA_MACMU (Peptidyl-prolyl cis-trans isomerase A OS=Macaca mulatta GN=PPIA PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 5.282e-30
Identity = 63/112 (56.25%), Postives = 78/112 (69.64%), Query Frame = -1 
Query:  540 FHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENCKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRTIEAEGRQTGEPKSKVVISNSGEM 875
            FHRIIP FM Q           G+SI+GE F DEN  LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM++V  +E  G + G+   K+ I++ G++
Sbjct:   53 FHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CB293997 vs. ExPASy Swiss-Prot
Match: PPIA_HYLSY (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates syndactylus GN=PPIA PE=3 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 5.282e-30
Identity = 63/112 (56.25%), Postives = 78/112 (69.64%), Query Frame = -1 
Query:  540 FHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENCKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRTIEAEGRQTGEPKSKVVISNSGEM 875
            FHRIIP FM Q           G+SI+GE F DEN  LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM++V  +E  G + G+   K+ I++ G++
Sbjct:   53 FHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CB293997 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLE (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates leucogenys GN=PPIA PE=3 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 5.282e-30
Identity = 63/112 (56.25%), Postives = 78/112 (69.64%), Query Frame = -1 
Query:  540 FHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENCKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRTIEAEGRQTGEPKSKVVISNSGEM 875
            FHRIIP FM Q           G+SI+GE F DEN  LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM++V  +E  G + G+   K+ I++ G++
Sbjct:   53 FHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CB293997 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLA (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates lar GN=PPIA PE=3 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 5.282e-30
Identity = 63/112 (56.25%), Postives = 78/112 (69.64%), Query Frame = -1 
Query:  540 FHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENCKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRTIEAEGRQTGEPKSKVVISNSGEM 875
            FHRIIP FM Q           G+SI+GE F DEN  LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM++V  +E  G + G+   K+ I++ G++
Sbjct:   53 FHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CB293997 vs. ExPASy Swiss-Prot
Match: PPIA_HUMAN (Peptidyl-prolyl cis-trans isomerase A OS=Homo sapiens GN=PPIA PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 5.282e-30
Identity = 63/112 (56.25%), Postives = 78/112 (69.64%), Query Frame = -1 
Query:  540 FHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENCKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRTIEAEGRQTGEPKSKVVISNSGEM 875
            FHRIIP FM Q           G+SI+GE F DEN  LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM++V  +E  G + G+   K+ I++ G++
Sbjct:   53 FHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CB293997 vs. ExPASy Swiss-Prot
Match: PPIA_GORGO (Peptidyl-prolyl cis-trans isomerase A OS=Gorilla gorilla gorilla GN=PPIA PE=3 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 5.282e-30
Identity = 63/112 (56.25%), Postives = 78/112 (69.64%), Query Frame = -1 
Query:  540 FHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENCKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRTIEAEGRQTGEPKSKVVISNSGEM 875
            FHRIIP FM Q           G+SI+GE F DEN  LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM++V  +E  G + G+   K+ I++ G++
Sbjct:   53 FHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CB293997 vs. ExPASy Swiss-Prot
Match: PPIA_CERAE (Peptidyl-prolyl cis-trans isomerase A OS=Cercopithecus aethiops GN=PPIA PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 5.282e-30
Identity = 63/112 (56.25%), Postives = 78/112 (69.64%), Query Frame = -1 
Query:  540 FHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENCKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRTIEAEGRQTGEPKSKVVISNSGEM 875
            FHRIIP FM Q           G+SI+GE F DEN  LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM++V  +E  G + G+   K+ I++ G++
Sbjct:   53 FHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CB293997 vs. ExPASy Swiss-Prot
Match: PPIA_PIG (Peptidyl-prolyl cis-trans isomerase A OS=Sus scrofa GN=PPIA PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 9.009e-30
Identity = 63/112 (56.25%), Postives = 78/112 (69.64%), Query Frame = -1 
Query:  540 FHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENCKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRTIEAEGRQTGEPKSKVVISNSGEM 875
            FHRIIP FM Q           G+SI+GE F DEN  LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM++V  +E  G + G+   K+ I++ G++
Sbjct:   53 FHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQI 164
[Close]
BLAST of CB293997 vs. ExPASy Swiss-Prot
Match: PPIA_BOVIN (Peptidyl-prolyl cis-trans isomerase A OS=Bos taurus GN=PPIA PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 9.009e-30
Identity = 63/112 (56.25%), Postives = 78/112 (69.64%), Query Frame = -1 
Query:  540 FHRIIPSFMIQXXXXXXXXXXXGESIFGESFADENCKLKHTGPGVLSMANAGPDTNGSQFFITTVITSWLDGRHVVFGKVLSGMDVVRTIEAEGRQTGEPKSKVVISNSGEM 875
            FHRIIP FM Q           G+SI+GE F DEN  LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM++V  +E  G + G+   K+ I++ G++
Sbjct:   53 FHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQI 164
The following BLAST results are available for this feature:
BLAST of CB293997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
PPIA_PANPA5.282e-3056.25Peptidyl-prolyl cis-trans isomerase A OS=Pan panis... [more]
PPIA_MACMU5.282e-3056.25Peptidyl-prolyl cis-trans isomerase A OS=Macaca mu... [more]
PPIA_HYLSY5.282e-3056.25Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLE5.282e-3056.25Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLA5.282e-3056.25Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HUMAN5.282e-3056.25Peptidyl-prolyl cis-trans isomerase A OS=Homo sapi... [more]
PPIA_GORGO5.282e-3056.25Peptidyl-prolyl cis-trans isomerase A OS=Gorilla g... [more]
PPIA_CERAE5.282e-3056.25Peptidyl-prolyl cis-trans isomerase A OS=Cercopith... [more]
PPIA_PIG9.009e-3056.25Peptidyl-prolyl cis-trans isomerase A OS=Sus scrof... [more]
PPIA_BOVIN9.009e-3056.25Peptidyl-prolyl cis-trans isomerase A OS=Bos tauru... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_05da06_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05da06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293997 ID=CB293997; Name=CB293997; organism=Citrus sinensis; type=EST; length=878bp
TGATCATGAGATTACTCAGATATTAACTCTTCATATAAGCTCGATATCTC
ACTCCAAGAATCTCTCTCTCACTCGTCACTTATCTATCCTTTTGCTGACC
TTTGAGTAACCTTTTAGCCACACAGAACAAGCCCGGGGTGGTCTTCTTAG
CTAACAGATTTAACAGCCAAAAGGGCCCATGCCAGCTCAGCATGCCACCT
CATTCACGTTTTAACAGAATATAACTACTTCTTGGTTTCGCATGCCATGA
AACCAAGACCATTATATGAGTAGGAGTAACTGGTTCTTACAAGCAAATGC
AGGCAATTCCACTATAAACAATGAAAAATAATGAAACGCAAACTATTCTA
GGAATAACGGAGCTATTACCAAGCTCGAATCTGTTAAAGACCATTGCAAA
TTGCAATAAGGAATTATAGTTGTTTTTCTACAGACCATATACCAACCCGA
ATGGATGTGGAACCAAACAGATAGCACAAATATAGGACAAGTTATCAATT
TCCATATAAAAATTTAATAAGGATGGTCTGTCACAAAGCCATTTCACCAC
TGTTAGATATAACAACTTTACTTTTGGGCTCCCCAGTCTGCCTTCCTTCC
GCTTCAATTGTGCGGACAACGTCCATCCCAGAGAGCACTTTGCCAAACAC
AACATGGCGGCCATCCAACCAGCTAGTTATGACAGTCGTAATGAAGAACT
GTGACCCATTGGTGTCTGGCCCAGCATTTGCCATCGACAGAACTCCTGGA
CCAGTGTGCTTCAGTTTACAGTTCTCATCAGCAAAACTTTCCCCAAATAT
TGACTCTCCACCACGCCCATCACCAAGAGTAAAATCACCGCCCTGGATCA
TAAAGCTTGGAATAATCCTGTGAAATGA
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