CB293999

Overview
NameCB293999
Unique NameCB293999
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.033e-14
Identity = 54/144 (37.50%), Postives = 78/144 (54.17%), Query Frame = 1
Query:  436 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYC-SSERRPLYH 858
            FS  +L  AT NFSS+ I+ + G+     VYKG L DG    R +AVKK         ++F +E   + ++ H+ +  L+G C +    +LV E++PN  L +HL     EN    W +RLR+A+ IA AL Y  SS   P+YH
Sbjct:  435 FSSRELEKATENFSSNRILGQGGQ---GTVYKGMLVDG----RIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSASSPIYH 571          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.033e-14
Identity = 48/138 (34.78%), Postives = 74/138 (53.62%), Query Frame = 1
Query:  436 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGND-------NRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDY 828
            F+  +L+ AT NF  D ++ E G      V+KG + DG         +   +AVKK     +   K++  E   +G+L H  L  L+GYC +G+ RLLV E+MP  +L  HLF    Q + WA+R++VA+  A+ L +
Sbjct:   71 FTFNELKNATRNFRPDSLLGEGGF---GYVFKGWI-DGTTLTASKPGSGIVVAVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAIGAAKGLTF 204          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.349e-14
Identity = 51/139 (36.69%), Postives = 74/139 (53.24%), Query Frame = 1
Query:  436 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT--IEWAMRLRVALYIAEALDYCSSERR 846
            F+L  ++ ATNNF  +  + E G      VYKG L DG      IAVK+ +  +    ++F  E   +  L+H  L  L G C +G E LLV EY+ N++LA+ LF  E Q   ++W+ R +V + IA+ L Y   E R
Sbjct:  655 FTLKQIKRATNNFDPENKIGEGGF---GPVYKGVLADGMT----IAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESR 786          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.349e-14
Identity = 52/140 (37.14%), Postives = 75/140 (53.57%), Query Frame = 1
Query:  436 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSERRP 849
            F L++L+ AT+ F      +E G  +   VYK  L DG      +AVK+         + + F  E   + K+RH  + NL+GYC +  ERLLV EYMP+ TL  HL H +   ++W+MRL++ L  A  LDY  +E  P
Sbjct:  507 FRLSELKDATHGFKE---FNELGRGSFGFVYKAVLSDGIH----VAVKRANAATIIHSNNRGFESELEILCKIRHNNIVNLLGYCSEMGERLLVYEYMPHGTLHDHL-HGDLSQLDWSMRLKIMLQAARGLDYLHNEVDP 638          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.761e-14
Identity = 50/139 (35.97%), Postives = 74/139 (53.24%), Query Frame = 1
Query:  436 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT--IEWAMRLRVALYIAEALDYCSSERR 846
            F+L  ++ ATNNF  +  + E G      VYKG L DG      IAVK+ +  +    ++F  E   +  L+H  L  L G C +G E LLV EY+ N++LA+ LF  E Q   ++W+ R ++ + IA+ L Y   E R
Sbjct:  657 FTLKQIKRATNNFDPENKIGEGGF---GPVYKGVLADGMT----IAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESR 788          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.301e-14
Identity = 51/143 (35.66%), Postives = 78/143 (54.55%), Query Frame = 1
Query:  436 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF-HWENQTIEWAMRLRVALYIAEALDYC-SSERRPLYH 858
            FS  +L  AT+NFS   I+ + G+     VYKG L DG    R +AVKK         ++F +E   + ++ H+ +  L+G C + +   LV E++PN  L +H+    ++ T  W MRLR+A+ IA AL Y  S+   P+YH
Sbjct:  439 FSSRELEKATDNFSESRILGQGGQ---GTVYKGMLVDG----RTVAVKKSKVVDEDKLEEFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNGNLFQHIHEESDDYTKTWGMRLRIAVDIAGALSYLHSAASSPIYH 574          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.301e-14
Identity = 46/139 (33.09%), Postives = 76/139 (54.68%), Query Frame = 1
Query:  433 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ-TIEWAMRLRVALYIAEALDYCSSERR 846
            +FS   + AAT+ FS   ++   G      VY+G+L  G +    +AVK+ +K +    ++F +EA  V KL+HK L  L+G+C +G+E++LV E++PN +L   LF    Q  ++W  R  +   IA  + Y   + R
Sbjct:  332 QFSFKTIEAATDKFSDSNMIGRGGF---GEVYRGKLSSGPE----VAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFDPAKQGELDWTRRYNIIGGIARGILYLHQDSR 463          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.005e-14
Identity = 47/134 (35.07%), Postives = 72/134 (53.73%), Query Frame = 1
Query:  436 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT---IEWAMRLRVALYIAEALDY 828
            FS+ ++++ATN+F    I+   G  +   VYKG++  G      +AVK+    +    K+F  E   + KLRH  L +LIGYC + +E +LV EYMP+ TL  HLF  +  +   + W  RL + +  A  L Y
Sbjct:  506 FSIFEIKSATNDFEDKLIIGVGGFGS---VYKGQIDGG---ATLVAVKRLEITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQY 633          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.005e-14
Identity = 51/144 (35.42%), Postives = 78/144 (54.17%), Query Frame = 1
Query:  436 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ--TIEWAMRLRVALYIAEALDYC-SSERRPLYH 858
            F+  +L  AT NFS + ++   G+     VYKG L DG    R +AVKK         ++F +E   + ++ H+ +  L+G C + +  +LV E++ N  L KH+   E+   T+ W MRLR+A+ IA AL Y  SS   P+YH
Sbjct:  441 FNSRELEKATENFSENRVLGHGGQ---GTVYKGMLVDG----RTVAVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPMLVYEFIINGNLFKHIHEEESDDYTMLWGMRLRIAVDIAGALSYLHSSASSPIYH 577          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.005e-14
Identity = 50/143 (34.97%), Postives = 81/143 (56.64%), Query Frame = 1
Query:  436 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF-HWENQTIEWAMRLRVALYIAEALDYC-SSERRPLYH 858
            FS  +LR AT+NFS D ++ + G+     VYKG L DG+     +AVK+         ++F +E   + ++ H+ +  L+G C + +  +LV EY+PN  L K L    ++ T+ W +RLR+A+ IA AL Y  S+   P++H
Sbjct:  417 FSSKELRKATDNFSIDRVLGQGGQ---GTVYKGMLVDGSI----VAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDESDDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFH 552          
The following BLAST results are available for this feature:
BLAST of CB293999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
WAKLH_ARATH1.033e-1437.50Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
APK2B_ARATH1.033e-1434.78Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
Y5344_ARATH1.349e-1436.69Probable LRR receptor-like serine/threonine-protei... [more]
ACCR2_ARATH1.349e-1437.14Serine/threonine-protein kinase-like protein CCR2 ... [more]
Y5343_ARATH1.761e-1435.97Probable LRR receptor-like serine/threonine-protei... [more]
WAKLK_ARATH2.301e-1435.66Putative wall-associated receptor kinase-like 11 O... [more]
CRK35_ARATH2.301e-1433.09Putative cysteine-rich receptor-like protein kinas... [more]
Y5900_ARATH3.005e-1435.07Putative receptor-like protein kinase At5g39000 OS... [more]
WAKLN_ARATH3.005e-1435.42Wall-associated receptor kinase-like 18 OS=Arabido... [more]
WAKLA_ARATH3.005e-1434.97Wall-associated receptor kinase-like 1 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_05dc08_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05dc08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293999 ID=CB293999; Name=CB293999; organism=Citrus sinensis; type=EST; length=859bp
GCCCATTGAAAAAACCAAAAAAAAAAAAATGAAAAGAAAAAGAACCCTAG
TGCATATCTCCACTGATTAAATCTCTCTCTCTCTCTCTCTTTCACACTCA
CCCACACGAGCGCTTTCACTTGGACACAAACAAAAACTCTCTCTCGATAA
GAGAAAATAAAAAATTAAAAAGACGAAAACAAAACCAAACAGCTAATATT
ATTAGCTTCAGCTGCTGAGCTGGGGGGTTTGGTTGGTTCATTTCTTCTGA
GTCAACTCGGCCGAGTTATGGGCTGTTGCGAATCAACCTTCTTAAAAGGA
CACCTCTCGGTTGATACCAAAAATCGCCACCACCACCAACAGAATCACCG
CAATCATCCGACTCAGCCGTCTAATGGTACTGAGGGCTCAGGCGGACTCG
CTGCCGGCTCAGATGGCGCGCCGGCTTTCGCCGAGTTCTCCTTAGCCGAC
CTCAGAGCCGCTACGAATAACTTCAGTTCTGATTTTATCGTATCCGAGAG
CGGCGAAAAGGCTCCCAATGTCGTCTATAAAGGCCGCCTTCAAGACGGAA
ATGATAACCGCCGTTGGATCGCCGTTAAAAAATTCACCAAACATGCCTGG
CCCGATCCCAAACAGTTTGCTGATGAGGCTTGGGGTGTTGGGAAGCTGAG
GCATAAGAGGCTGGCGAATTTGATTGGCTATTGTTGTGATGGTGATGAGA
GATTGCTGGTGGCTGAGTACATGCCAAATGATACTCTTGCTAAACATTTA
TTTCACTGGGAGAATCAAACCATTGAGTGGGCTATGCGTCTAAGAGTTGC
TCTGTATATTGCTGAAGCTTTAGATTATTGCAGTAGTGAAAGACGTCCAT
TATACCATG
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