CB293999

Overview
NameCB293999
Unique NameCB293999
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB293999_ssr72 microsatellite CB293999_ssr72:72..89. BLAST: Citrus ESTs to Prunus persica proteins V1
CB293999_ssr327 microsatellite CB293999_ssr327:327..338. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig338 contig Csv1_Contig338:9..867. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.742e-14
Identity = 43/131 (32.82%), Postives = 69/131 (52.67%), Query Frame = 1
Query:  436 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDY 828
            FSL++++  T+NF    ++   G      VYKG +  G      +A+KK   ++     +F  E   + +LRHK L +LIGYC +G E  L+ +YM   TL +HL++ +   + W  RL +A+  A  L Y
Sbjct:  509 FSLSEIKHGTHNFDESNVIGVGGF---GKVYKGVIDGGTK----VAIKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLIYDYMSLGTLREHLYNTKRPQLTWKRRLEIAIGAARGLHY 632          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.142e-13
Identity = 47/142 (33.10%), Postives = 80/142 (56.34%), Query Frame = 1
Query:  436 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSERR-PLYH 858
            F+ A+L  AT+NF+S   + + G      VYKG L  G      +A+K+  + +    K+F  E   + +L H+ L +L+G+C +  E++LV EYM N TL  ++     + +++AMRLR+AL  A+ + Y  +E   P++H
Sbjct:  613 FTYAELALATDNFNSSTQIGQGGY---GKVYKGTLGSGTV----VAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNISVKLKEPLDFAMRLRIALGSAKGILYLHTEANPPIFH 747          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.142e-13
Identity = 50/137 (36.50%), Postives = 77/137 (56.20%), Query Frame = 1
Query:  433 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWE---NQTIEWAMRLRVALYIAEALDY 828
            EFS  +L  AT  FS D   S+ G+ + + V+KG L+DG      +AVK+  K +      K+F +E   + +L H  L NL+GYC DG ERLLV E+M + +L +HL   +    + + WA R+ +A+  A  ++Y
Sbjct:  492 EFSYEELEQATGGFSED---SQVGKGSFSCVFKGILRDGTV----VAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEY 621          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.491e-13
Identity = 44/131 (33.59%), Postives = 74/131 (56.49%), Query Frame = 1
Query:  433 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ-TIEWAMRLRVALYIAEAL 822
            ++    + AATN FS     ++ GE     VYKG+  +G +    +AVK+ +K +  D K+F +EA  V K++H+ LA L+G+C  GD + L+ E++ N +L   LF  E Q  ++W  R ++   IA+ +
Sbjct:  340 QYEFKTIEAATNKFSKS---NKLGEGRFGEVYKGKFSNGTE----VAVKRLSKVSGQDTKKFRNEAVLVSKIQHRNLARLLGFCLQGDGKFLIYEFVLNKSLDYFLFDPEKQGELDWTRRYKIIGGIAQGI 463          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.948e-13
Identity = 51/144 (35.42%), Postives = 76/144 (52.78%), Query Frame = 1
Query:  436 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ--TIEWAMRLRVALYIAEALDYC-SSERRPLYH 858
            F+  +L  AT NFS   I+ E G+     VYKG L DG    R +AVKK         ++F +E   + ++ H+ +  L+G C + D  +LV E++PN  L +HL    +      W +RLR+A+ IA AL Y  S+   P+YH
Sbjct:  421 FNSRELEKATENFSLTRILGEGGQ---GTVYKGMLVDG----RIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETDVPILVYEFIPNGNLFEHLHDDSDDYTMTTWEVRLRIAVDIAGALSYLHSAASSPIYH 557          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.948e-13
Identity = 49/145 (33.79%), Postives = 79/145 (54.48%), Query Frame = 1
Query:  436 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF---HWENQTIEWAMRLRVALYIAEALDYC-SSERRPLYH 858
            FS  +L+ AT+NFS + ++ + G+     VYKG L +G    R +AVK+         ++F +E   + ++ H+ +  L+G C   +  +LV EY+PN  L K L       + T+ W +RLR+A+ IA AL Y  S+   P+YH
Sbjct:  420 FSSKELKKATDNFSMNRVLGQGGQ---GTVYKGMLAEG----RIVAVKRSKVVGEGKMEEFINEVVLLSQINHRNIVKLLGCCLGTEVPVLVYEYIPNGDLFKRLHEKSESNDYTMTWEVRLRIAIEIAGALSYMHSAASIPIYH 557          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.948e-13
Identity = 43/133 (32.33%), Postives = 78/133 (58.65%), Query Frame = 1
Query:  433 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFH-WENQTIEWAMRLRVALYIAEALDY 828
            ++ L  + AAT  FS   ++ + G      V+KG LQDG++    IAVK+ +K +    ++F +E   V KL+H+ L  ++G+C +G+E++LV E++PN +L + LF   +   ++WA R ++ +  A  + Y
Sbjct:  308 QYDLKTIEAATCTFSKCNMLGQGGF---GEVFKGVLQDGSE----IAVKRLSKESAQGVQEFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLFEPTKKGQLDWAKRYKIIVGTARGILY 433          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.948e-13
Identity = 47/133 (35.34%), Postives = 74/133 (55.64%), Query Frame = 1
Query:  451 LRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYCSSERR 846
            L+ AT+NFSS+   +E G      VYKG    G +    IAVK+ + ++     +F +E   + KL+H+ L  LIG+C  G+ERLLV E++ N +L + +F  E  Q ++W +R ++   IA  L Y   + R
Sbjct:  350 LKTATDNFSSE---NELGRGGFGSVYKGVFPQGQE----IAVKRLSGNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFDTEKRQLLDWVVRYKMIGGIARGLLYLHEDSR 475          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: ACCR1_ARATH (Serine/threonine-protein kinase-like protein CCR1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.948e-13
Identity = 49/140 (35.00%), Postives = 75/140 (53.57%), Query Frame = 1
Query:  436 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSERRP 849
            F L++L+ ATN F      +E G  +   VYK  L DG    R +AVK+         + ++F  E   +  +RH  + NL+GY  +  ERLLV EYMP+ TL  HL H     + W++R+++A+  A+ L+Y  +E  P
Sbjct:  508 FRLSELKDATNGFKE---FNELGRGSYGFVYKAVLADG----RQVAVKRANAATIIHTNTREFETELEILCNIRHCNIVNLLGYSTEMGERLLVYEYMPHGTLHDHL-HSGFSPLSWSLRIKIAMQTAKGLEYLHNEAEP 639          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.544e-13
Identity = 48/144 (33.33%), Postives = 71/144 (49.31%), Query Frame = 1
Query:  430 AEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYC-SSERRPLYH 858
            A F   ++  AT+ FS      + G  A   VY+G+LQ    N  W+A+K+          Q  +E   +  + H  L  L+G C +  + +LV EYMPN TL++HL       + W +RL VA   A+A+ Y  SS   P+YH
Sbjct:  334 AFFPYKEIEKATDGFSEK---QKLGIGAYGTVYRGKLQ----NDEWVAIKRLRHRDSESLDQVMNEIKLLSSVSHPNLVRLLGCCIEQGDPVLVYEYMPNGTLSEHLQRDRGSGLPWTLRLTVATQTAKAIAYLHSSMNPPIYH 470          
The following BLAST results are available for this feature:
BLAST of CB293999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ANX2_ARATH8.742e-1432.82Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
Y1684_ARATH1.142e-1333.10Probable LRR receptor-like serine/threonine-protei... [more]
CRI4_MAIZE1.142e-1336.50Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
CRK22_ARATH1.491e-1333.59Cysteine-rich receptor-like protein kinase 22 OS=A... [more]
WAKLJ_ARATH1.948e-1335.42Wall-associated receptor kinase-like 10 OS=Arabido... [more]
WAKLF_ARATH1.948e-1333.79Wall-associated receptor kinase-like 6 OS=Arabidop... [more]
CRK33_ARATH1.948e-1332.33Putative cysteine-rich receptor-like protein kinas... [more]
CRK29_ARATH1.948e-1335.34Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
ACCR1_ARATH1.948e-1335.00Serine/threonine-protein kinase-like protein CCR1 ... [more]
WAKLO_ARATH2.544e-1333.33Wall-associated receptor kinase-like 14 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_05dc08_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05dc08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293999 ID=CB293999; Name=CB293999; organism=Citrus sinensis; type=EST; length=859bp
GCCCATTGAAAAAACCAAAAAAAAAAAAATGAAAAGAAAAAGAACCCTAG
TGCATATCTCCACTGATTAAATCTCTCTCTCTCTCTCTCTTTCACACTCA
CCCACACGAGCGCTTTCACTTGGACACAAACAAAAACTCTCTCTCGATAA
GAGAAAATAAAAAATTAAAAAGACGAAAACAAAACCAAACAGCTAATATT
ATTAGCTTCAGCTGCTGAGCTGGGGGGTTTGGTTGGTTCATTTCTTCTGA
GTCAACTCGGCCGAGTTATGGGCTGTTGCGAATCAACCTTCTTAAAAGGA
CACCTCTCGGTTGATACCAAAAATCGCCACCACCACCAACAGAATCACCG
CAATCATCCGACTCAGCCGTCTAATGGTACTGAGGGCTCAGGCGGACTCG
CTGCCGGCTCAGATGGCGCGCCGGCTTTCGCCGAGTTCTCCTTAGCCGAC
CTCAGAGCCGCTACGAATAACTTCAGTTCTGATTTTATCGTATCCGAGAG
CGGCGAAAAGGCTCCCAATGTCGTCTATAAAGGCCGCCTTCAAGACGGAA
ATGATAACCGCCGTTGGATCGCCGTTAAAAAATTCACCAAACATGCCTGG
CCCGATCCCAAACAGTTTGCTGATGAGGCTTGGGGTGTTGGGAAGCTGAG
GCATAAGAGGCTGGCGAATTTGATTGGCTATTGTTGTGATGGTGATGAGA
GATTGCTGGTGGCTGAGTACATGCCAAATGATACTCTTGCTAAACATTTA
TTTCACTGGGAGAATCAAACCATTGAGTGGGCTATGCGTCTAAGAGTTGC
TCTGTATATTGCTGAAGCTTTAGATTATTGCAGTAGTGAAAGACGTCCAT
TATACCATG
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