CB293999

Overview
NameCB293999
Unique NameCB293999
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.262e-12
Identity = 44/144 (30.56%), Postives = 75/144 (52.08%), Query Frame = 1
Query:  427 FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT----IEWAMRLRVALYIAEALDYCSSERR 846
            + +F + D+ AAT+NF +   + + G      VYKG L +G +    +AVK+ ++ +     +F +E   V KL+H+ L  L+G+   G+E++LV E++PN +L   LF   N T    ++W  R  +   I   L Y   + R
Sbjct:  331 YLQFDIKDIEAATSNFLASNKIGQGGF---GEVYKGTLSNGTE----VAVKRLSRTSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEFVPNKSLDYFLFGSTNPTKKGQLDWTRRYNIIGGITRGLLYLHQDSR 467          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.649e-12
Identity = 45/131 (34.35%), Postives = 64/131 (48.85%), Query Frame = 1
Query:  436 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDY 828
            FSL++L+ AT NF +  I+   G      VY G L DG      +AVK+    +     +F  E   + KLRH+ L +LIGYC +  E +LV E+M N     HL+      + W  RL + +  A  L Y
Sbjct:  514 FSLSELQEATKNFEASQIIGVGGF---GNVYIGTLDDGTK----VAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYGKNLAPLTWKQRLEICIGSARGLHY 637          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.649e-12
Identity = 45/138 (32.61%), Postives = 71/138 (51.45%), Query Frame = 1
Query:  436 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT---IEWAMRLRVALYIAEALDYCSSE 840
            F   DL  AT  F  + +V   G     +VY+G ++  +D    IAVKK T ++    ++F  E   +G+LRHK L NL G+C   ++ LL+ +Y+PN +L   L+    ++   + W  R ++A  IA  L Y   E
Sbjct:  351 FRYRDLYKATEGFKENRVVGTGGF---GIVYRGNIRSSSDQ---IAVKKITPNSMQGVREFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDYIPNGSLDSLLYSKPRRSGAVLSWNARFQIAKGIASGLLYLHEE 482          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.649e-12
Identity = 45/140 (32.14%), Postives = 72/140 (51.43%), Query Frame = 1
Query:  433 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ-TIEWAMRLRVALYIAEALDYCSSERRP 849
            ++    +  ATNNFS       SG      V+KGRL DG +    IAVK+ ++      K+F +E   V KL+H+ L  L+G+   G+E+++V EY+PN +L   LF    Q  ++W  R ++    A  + Y   + +P
Sbjct:  347 QYKFKTIETATNNFSERLGHGGSGH-----VFKGRLPDGKE----IAVKRLSEKTEQSKKEFKNEVVLVAKLQHRNLVRLLGFSVKGEEKIIVYEYLPNRSLDYILFDPTKQGELDWKKRYKIIGGTARGILYLHQDSQP 477          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.153e-12
Identity = 46/140 (32.86%), Postives = 71/140 (50.71%), Query Frame = 1
Query:  436 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHL--FHWENQTIEWAMRLRVALYIAEALDYCSSERRP 849
            FS  +++ AT+NFS   I+ + G     +VYKG L +G      +AVK+     +    QF  E   +G   H+ L  L G+C   +ER+LV  YMPN ++A  L   + E  +++W  R+ +AL  A  L Y   +  P
Sbjct:  288 FSFREIQTATSNFSPKNILGQGGF---GMVYKGYLPNGTV----VAVKRLKDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNP 420          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: SRF2_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsis thaliana GN=SRF2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.153e-12
Identity = 47/139 (33.81%), Postives = 73/139 (52.52%), Query Frame = 1
Query:  436 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNR-RWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSERRP 849
            FS A+L+ ATN FS + ++   GE     VY+ +L DG     R I +   + H   + +QF +      KLRH  +  L+G+C +  E LLV EY+ + +L   +     + + W +RLR+A+ +A ALDY  S   P
Sbjct:  403 FSAAELQLATNCFSEENLL---GEGPLGSVYRAKLPDGQFAVVRNIPMSSLSLH---EEEQFTEVLQTASKLRHPNIVTLLGFCIENGEHLLVYEYVGHLSLYNAMHDEVYKPLSWGLRLRIAIGVARALDYLHSSFCP 535          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.153e-12
Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = 1
Query:  436 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGN------DNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWEN--QTIEWAMRLRVALYIAEALDY 828
            FSL++L++AT NF  D +V E G      V+KG + + +           IAVK+  +  +   +++  E   +G+L H  L  LIGYC + + RLLV E+M   +L  HLF      Q + W  R+R+AL  A  L +
Sbjct:   56 FSLSELKSATRNFRPDSVVGEGGF---GCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAF 191          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.153e-12
Identity = 44/139 (31.65%), Postives = 73/139 (52.52%), Query Frame = 1
Query:  433 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT-IEWAMRLRVALYIAEALDYCSSERR 846
            +F    + AATN F      ++ G+     VYKG    G      +AVK+ +K +    ++FA+E   V KL+H+ L  L+G+C + DER+LV E++PN +L   +F    Q+ ++W  R ++   IA  + Y   + R
Sbjct:  338 QFDFKAIEAATNKFCE---TNKLGQGGFGEVYKGIFPSGVQ----VAVKRLSKTSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPNKSLDYFIFDSTMQSLLDWTRRYKIIGGIARGILYLHQDSR 469          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.153e-12
Identity = 42/139 (30.22%), Postives = 71/139 (51.08%), Query Frame = 1
Query:  433 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF-HWENQTIEWAMRLRVALYIAEALDYCSSERR 846
            +F    + AATNNF      ++ G      V+KG   +G +    +AVK+ +K +    ++F +E   V KL+H+ L  L+G+  +G+E++LV EYMPN +L   LF H     ++W  R  +   +   + Y   + R
Sbjct:  322 QFDFKAIEAATNNFQKS---NKLGHGGFGEVFKGTFPNGTE----VAVKRLSKISGQGEEEFKNEVLLVAKLQHRNLVRLLGFSVEGEEKILVYEYMPNKSLDYFLFDHRRRGQLDWRTRYNIIRGVTRGILYLHQDSR 453          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.153e-12
Identity = 46/135 (34.07%), Postives = 73/135 (54.07%), Query Frame = 1
Query:  433 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT---IEWAMRLRVALYIAEALDY 828
            + + ADL  ATN F +D +V   G      VYK +L+DG+     +A+KK    +    ++F  E   +GK++H+ L  L+GYC  G+ERLLV EYM   +L + + H   +T   + W  R ++A+  A  L +
Sbjct:  875 KLTFADLLEATNGFHNDSLVGSGGF---GDVYKAQLKDGSV----VAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSL-EDVLHDRKKTGIKLNWPARRKIAIGAARGLAF 1001          
The following BLAST results are available for this feature:
BLAST of CB293999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
CRK30_ARATH1.262e-1230.56Putative cysteine-rich receptor-like protein kinas... [more]
Y4391_ARATH1.649e-1234.35Probable receptor-like protein kinase At4g39110 OS... [more]
LRKA3_ARATH1.649e-1232.61Lectin-domain containing receptor kinase A4.3 OS=A... [more]
CRK13_ARATH1.649e-1232.14Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
Y5457_ARATH2.153e-1232.86Probable LRR receptor-like serine/threonine-protei... [more]
SRF2_ARATH2.153e-1233.81Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsi... [more]
NAK_ARATH2.153e-1233.81Probable serine/threonine-protein kinase NAK OS=Ar... [more]
CRK4_ARATH2.153e-1231.65Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
CRK16_ARATH2.153e-1230.22Putative cysteine-rich receptor-like protein kinas... [more]
BRI1_SOLPE2.153e-1234.07Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_05dc08_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05dc08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293999 ID=CB293999; Name=CB293999; organism=Citrus sinensis; type=EST; length=859bp
GCCCATTGAAAAAACCAAAAAAAAAAAAATGAAAAGAAAAAGAACCCTAG
TGCATATCTCCACTGATTAAATCTCTCTCTCTCTCTCTCTTTCACACTCA
CCCACACGAGCGCTTTCACTTGGACACAAACAAAAACTCTCTCTCGATAA
GAGAAAATAAAAAATTAAAAAGACGAAAACAAAACCAAACAGCTAATATT
ATTAGCTTCAGCTGCTGAGCTGGGGGGTTTGGTTGGTTCATTTCTTCTGA
GTCAACTCGGCCGAGTTATGGGCTGTTGCGAATCAACCTTCTTAAAAGGA
CACCTCTCGGTTGATACCAAAAATCGCCACCACCACCAACAGAATCACCG
CAATCATCCGACTCAGCCGTCTAATGGTACTGAGGGCTCAGGCGGACTCG
CTGCCGGCTCAGATGGCGCGCCGGCTTTCGCCGAGTTCTCCTTAGCCGAC
CTCAGAGCCGCTACGAATAACTTCAGTTCTGATTTTATCGTATCCGAGAG
CGGCGAAAAGGCTCCCAATGTCGTCTATAAAGGCCGCCTTCAAGACGGAA
ATGATAACCGCCGTTGGATCGCCGTTAAAAAATTCACCAAACATGCCTGG
CCCGATCCCAAACAGTTTGCTGATGAGGCTTGGGGTGTTGGGAAGCTGAG
GCATAAGAGGCTGGCGAATTTGATTGGCTATTGTTGTGATGGTGATGAGA
GATTGCTGGTGGCTGAGTACATGCCAAATGATACTCTTGCTAAACATTTA
TTTCACTGGGAGAATCAAACCATTGAGTGGGCTATGCGTCTAAGAGTTGC
TCTGTATATTGCTGAAGCTTTAGATTATTGCAGTAGTGAAAGACGTCCAT
TATACCATG
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