CB293999

Overview
NameCB293999
Unique NameCB293999
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.797e-12
Identity = 43/139 (30.94%), Postives = 72/139 (51.80%), Query Frame = 1
Query:  433 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFH-WENQTIEWAMRLRVALYIAEALDYCSSERR 846
            +F    + AAT NF +   V++ G      VYKG   +G +    +AVK+ +K +    ++F +E + V KL+H+ L  L+GY   GDE++LV E++PN +L   LF   +   ++W  R  +   I   + Y   + R
Sbjct:  299 QFEFKAIEAATCNFHN---VNKLGHGGFGEVYKGTFPNGTE----VAVKRLSKTSGQGEEEFKNEVFLVAKLQHRNLVKLLGYAVKGDEKILVYEFLPNKSLDHFLFDPVKKGQLDWTRRYNIINGITRGIVYLHQDSR 430          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.265e-12
Identity = 41/130 (31.54%), Postives = 64/130 (49.23%), Query Frame = 1
Query:  448 DLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSS 837
            D+ +ATNNF    ++ + G      VYK  L DG       A+K+    +     +F  E   + ++RH+ L +L GYC +  E +LV E+M   TL +HL+     ++ W  RL + +  A  LDY  S
Sbjct:  480 DILSATNNFDEQLLIGKGGF---GYVYKAILPDGTK----AAIKRGKTGSGQGILEFQTEIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYGSNLPSLTWKQRLEICIGAARGLDYLHS 602          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.265e-12
Identity = 43/130 (33.08%), Postives = 69/130 (53.08%), Query Frame = 1
Query:  460 ATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF-HWENQTIEWAMRLRVALYIAEALDYCSSERR 846
            AT NFSS    ++ G+    +VYKGRL DG +    IAVK+ +K +     +F +E   + +L+H  L  ++G C +GDE++L+ EY+ N +L  +LF       + W  R  +   +A  L Y   + R
Sbjct:  524 ATENFSS---CNKLGQGGFGIVYKGRLLDGKE----IAVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGKTRRSKLNWNERFDITNGVARGLLYLHQDSR 646          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.265e-12
Identity = 44/133 (33.08%), Postives = 69/133 (51.88%), Query Frame = 1
Query:  451 LRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT-IEWAMRLRVALYIAEALDYCSSERR 846
            ++ ATN+F+    +   G      VYKG   +G +    +AVK+ +K++     +F  E   V KL+H+ L  L+G+   G+ER+LV EYMPN +L   LF    QT ++W  R  +   IA  + Y   + R
Sbjct:  346 IQTATNDFAESNKIGRGGF---GEVYKGTFSNGKE----VAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQTQLDWMQRYNIIGGIARGILYLHQDSR 471          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.265e-12
Identity = 43/139 (30.94%), Postives = 73/139 (52.52%), Query Frame = 1
Query:  433 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYCSSERR 846
            +F    + AATNNF     +++ G+     VYKG    G      +AVK+ +K +    ++F +E   V KL+H+ L  L+GYC +G+E++LV E++ N +L   LF     + ++W  R ++   IA  + Y   + R
Sbjct:  495 QFDFKAIVAATNNFLP---INKLGQGGFGEVYKGTFPSGVQ----VAVKRLSKTSGQGEREFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHNKSLDYFLFDTTMKRQLDWTRRYKIIGGIARGILYLHQDSR 626          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.182e-12
Identity = 46/136 (33.82%), Postives = 72/136 (52.94%), Query Frame = 1
Query:  433 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ--FADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAK--HLFHWENQTIEWAMRLRVALYIAEALDY 828
            EF L+DL++AT NFS   ++   GE +   VY+ +  DG    R +AVKK     +   K          + K+RH+ +A L+GYC +    +LV EY  N +L +  HL    ++ + W  R+R+AL  A A++Y
Sbjct:  391 EFELSDLQSATANFSPGNLL---GEGSIGRVYRAKYSDG----RTLAVKKIDSTLFDSGKSEGITPIVMSLSKIRHQNIAELVGYCSEQGHNMLVYEYFRNGSLHEFLHLSDCFSKPLTWNTRVRIALGTARAVEY 519          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.182e-12
Identity = 46/134 (34.33%), Postives = 71/134 (52.99%), Query Frame = 1
Query:  433 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIE--WAMRLRVALYIAEALDY 828
            + + ADL  ATN F +D +V   G      VYK +L+DG+     +A+KK    +    ++F  E   +GK++H+ L  L+GYC  G+ERLLV EYM   +L   L   +   I+  W  R ++A+  A  L +
Sbjct:  875 KLTFADLLEATNGFHNDSLVGSGGF---GDVYKAQLKDGSV----VAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKIGIKLNWPARRKIAIGAARGLAF 1001          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.069e-11
Identity = 43/133 (32.33%), Postives = 72/133 (54.14%), Query Frame = 1
Query:  451 LRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHW-ENQTIEWAMRLRVALYIAEALDYCSSERR 846
            L+AAT+NFS +   +E G      VYKG    G +    IAVK+ +  +     +F +E   + KL+H+ L  L+G+C +G ER+LV E++ N +L   +F   + Q ++W +R ++   +A  L Y   + R
Sbjct:  354 LKAATDNFSPE---NELGRGGFGSVYKGVFSGGQE----IAVKRLSCTSGQGDSEFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASLDNFIFDLKKRQLLDWGVRYKMIGGVARGLLYLHEDSR 479          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.069e-11
Identity = 45/136 (33.09%), Postives = 72/136 (52.94%), Query Frame = 1
Query:  433 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT----IEWAMRLRVALYIAEALDY 828
            + + A L  ATN FS++ +V   G      VYK +L+DG+     +A+KK  +      ++F  E   +GK++H+ L  L+GYC  G+ERLLV EYM   +L   L    ++     + WA R ++A+  A  L +
Sbjct:  846 KLTFAHLLEATNGFSAETMVGSGGF---GEVYKAQLRDGSV----VAIKKLIRITGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAF 974          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.069e-11
Identity = 46/143 (32.17%), Postives = 71/143 (49.65%), Query Frame = 1
Query:  436 FSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGN------DNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWEN--QTIEWAMRLRVALYIAEALDYCSSE 840
            F+  +L+ AT NF  D ++ E G      V+KG L +             IAVKK  +  +   +++  E   +G+L H  L  LIGYC + + RLLV E+M   +L  HLF      + + W +R+ VAL  A+ L +  S+
Sbjct:   55 FTFNELKLATRNFRPDSVIGEGGF---GCVFKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSD 194          
The following BLAST results are available for this feature:
BLAST of CB293999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
CRK24_ARATH4.797e-1230.94Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
Y2232_ARATH6.265e-1231.54Probable receptor-like protein kinase At2g23200 OS... [more]
SRK6_BRAOE6.265e-1233.08Putative serine/threonine-protein kinase receptor ... [more]
CRK8_ARATH6.265e-1233.08Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRK23_ARATH6.265e-1230.94Putative cysteine-rich receptor-like protein kinas... [more]
SRF5_ARATH8.182e-1233.82Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]
BRI1_SOLLC8.182e-1234.33Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
CRK28_ARATH1.069e-1132.33Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
BRL1_ARATH1.069e-1133.09Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
BIK1_ARATH1.069e-1132.17Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_05dc08_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05dc08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293999 ID=CB293999; Name=CB293999; organism=Citrus sinensis; type=EST; length=859bp
GCCCATTGAAAAAACCAAAAAAAAAAAAATGAAAAGAAAAAGAACCCTAG
TGCATATCTCCACTGATTAAATCTCTCTCTCTCTCTCTCTTTCACACTCA
CCCACACGAGCGCTTTCACTTGGACACAAACAAAAACTCTCTCTCGATAA
GAGAAAATAAAAAATTAAAAAGACGAAAACAAAACCAAACAGCTAATATT
ATTAGCTTCAGCTGCTGAGCTGGGGGGTTTGGTTGGTTCATTTCTTCTGA
GTCAACTCGGCCGAGTTATGGGCTGTTGCGAATCAACCTTCTTAAAAGGA
CACCTCTCGGTTGATACCAAAAATCGCCACCACCACCAACAGAATCACCG
CAATCATCCGACTCAGCCGTCTAATGGTACTGAGGGCTCAGGCGGACTCG
CTGCCGGCTCAGATGGCGCGCCGGCTTTCGCCGAGTTCTCCTTAGCCGAC
CTCAGAGCCGCTACGAATAACTTCAGTTCTGATTTTATCGTATCCGAGAG
CGGCGAAAAGGCTCCCAATGTCGTCTATAAAGGCCGCCTTCAAGACGGAA
ATGATAACCGCCGTTGGATCGCCGTTAAAAAATTCACCAAACATGCCTGG
CCCGATCCCAAACAGTTTGCTGATGAGGCTTGGGGTGTTGGGAAGCTGAG
GCATAAGAGGCTGGCGAATTTGATTGGCTATTGTTGTGATGGTGATGAGA
GATTGCTGGTGGCTGAGTACATGCCAAATGATACTCTTGCTAAACATTTA
TTTCACTGGGAGAATCAAACCATTGAGTGGGCTATGCGTCTAAGAGTTGC
TCTGTATATTGCTGAAGCTTTAGATTATTGCAGTAGTGAAAGACGTCCAT
TATACCATG
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