CB293999

Overview
NameCB293999
Unique NameCB293999
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.396e-11
Identity = 47/138 (34.06%), Postives = 72/138 (52.17%), Query Frame = 1
Query:  439 SLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF-HWENQTIEWAMRLRVALYIAEALDYCSSERRP 849
            SL  L  AT+NFS      + G  +   VY GR++DG +    +AVK     +    +QF  E   + ++ H+ L  LIGYC + D R+LV EYM N +L  HL    + + ++W  RL++A   A+ L+Y  +   P
Sbjct:  597 SLPVLEEATDNFSK-----KVGRGSFGSVYYGRMKDGKE----VAVKITADPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYKPLDWLTRLQIAQDAAKGLEYLHTGCNP 725          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.396e-11
Identity = 46/144 (31.94%), Postives = 69/144 (47.92%), Query Frame = 1
Query:  433 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCC-----DGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSERRP 849
            +FS  +++ ATNNFS   I+   G      V+KG L DG      +A K+F   +      FA E   +  +RH  L  L GYC      +G +R++V + + N +L  HLF      + W +R R+AL +A  L Y     +P
Sbjct:  270 KFSFDEIKKATNNFSRHNIIGRGGY---GNVFKGALPDGTQ----VAFKRFKNCSAGGDANFAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDLEAQLAWPLRQRIALGMARGLAYLHYGAQP 406          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.396e-11
Identity = 42/141 (29.79%), Postives = 72/141 (51.06%), Query Frame = 1
Query:  427 FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ-TIEWAMRLRVALYIAEALDYCSSERR 846
            F +     +  AT NF+     ++ G+     VYKG L +G +    +AVK+ +K +    ++F +E   V KL+H+ L  L+GYC + +E++LV E++PN +L   LF    Q  ++W  R  +   I   + Y   + R
Sbjct:  352 FQQLDFKTIEVATENFAK---TNKLGQGGFGEVYKGTLVNGTE----VAVKRLSKTSEQGAQEFKNEVVLVAKLQHRNLVKLLGYCLEPEEKILVYEFVPNKSLDYFLFDPTKQGQLDWTKRYNIIGGITRGILYLHQDSR 485          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.396e-11
Identity = 44/135 (32.59%), Postives = 71/135 (52.59%), Query Frame = 1
Query:  433 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ---TIEWAMRLRVALYIAEALDY 828
            + + A L  ATN FS+D ++   G      VYK +L DG+     +A+KK  +      ++F  E   +GK++H+ L  L+GYC  G+ERLLV EYM   +L   L     +    ++W+ R ++A+  A  L +
Sbjct:  845 KLTFAHLLEATNGFSADSMIGSGGF---GDVYKAKLADGSV----VAIKKLIQVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAF 972          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.823e-11
Identity = 52/143 (36.36%), Postives = 73/143 (51.05%), Query Frame = 1
Query:  433 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWE--NQTIEWAMRLRVALYIAEALDYCSSERRPLY 855
            +  L DL AATNNFSS  I   S      V YK  L DG+     +AVK+ +   + + KQF  E   +G+LRH  L  L+GYC   DERLLV ++M N TL   L +    +  ++W  R  + +  A+ L +     +P Y
Sbjct:  288 KIKLGDLMAATNNFSSGNIDVSS---RTGVSYKADLPDGSA----LAVKRLSACGFGE-KQFRSEMNKLGELRHPNLVPLLGYCVVEDERLLVYKHMVNGTLFSQLHNGGLCDAVLDWPTRRAIGVGAAKGLAWLHHGCQPPY 422          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.823e-11
Identity = 48/139 (34.53%), Postives = 70/139 (50.36%), Query Frame = 1
Query:  427 FAEFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF-HWENQTIEWAMRLRVALYIAEALDYCSSE 840
            F  +S  +L  AT  F  +    ESG      VYKG L+D     R +AVKK  ++     + F  E   +G++ H  L  + G+C +G  RLLV+EY+ N +LA  LF    N  ++W  R  +AL +A+ L Y   E
Sbjct:  521 FRRYSYRELVKATRKFKVELGRGESG-----TVYKGVLEDD----RHVAVKKL-ENVRQGKEVFQAELSVIGRINHMNLVRIWGFCSEGSHRLLVSEYVENGSLANILFSEGGNILLDWEGRFNIALGVAKGLAYLHHE 649          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.823e-11
Identity = 43/139 (30.94%), Postives = 75/139 (53.96%), Query Frame = 1
Query:  433 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT-IEWAMRLRVALYIAEALDYCSSERR 846
            +F    + AAT+ FS   + ++ G+     VYKG L +G      +AVK+ +K +    K+F +E   V KL+H+ L  L+G+C + +E++LV E++ N +L   LF    Q+ ++W  R ++   IA  + Y   + R
Sbjct:  327 QFDFKVIEAATDKFS---MCNKLGQGGFGQVYKGTLPNGVQ----VAVKRLSKTSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFDSRMQSQLDWTTRYKIIGGIARGILYLHQDSR 458          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.381e-11
Identity = 44/139 (31.65%), Postives = 72/139 (51.80%), Query Frame = 1
Query:  448 DLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDP----KQFADEAWGVGKLRHKRLANLIGYCCDGDE--RLLVAEYMPNDTL------AKHLFHWENQTIEWAMRLRVALYIAEALDY 828
            D+  AT+N S +F++   G      VYK  L++G      +AVKK     W D     K F+ E   +G++RH+ L  L+GYC    E   LL+ EYM N ++       K +   + + ++W  RLR+A+ +A+ ++Y
Sbjct:  943 DIMEATHNLSEEFMIGSGGS---GKVYKAELENGET----VAVKKIL---WKDDLMSNKSFSREVKTLGRIRHRHLVKLMGYCSSKSEGLNLLIYEYMKNGSIWDWLHEDKPVLEKKKKLLDWEARLRIAVGLAQGVEY 1071          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.381e-11
Identity = 44/134 (32.84%), Postives = 71/134 (52.99%), Query Frame = 1
Query:  433 EFSLADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIE--WAMRLRVALYIAEALDY 828
            + + ADL  ATN F +D ++   G      VYK  L+DG+     +A+KK    +    ++F  E   +GK++H+ L  L+GYC  GDERLLV E+M   +L   L   +   ++  W+ R ++A+  A  L +
Sbjct:  870 KLTFADLLQATNGFHNDSLIGSGGF---GDVYKAILKDGSA----VAIKKLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAF 996          
BLAST of CB293999 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.109e-11
Identity = 46/135 (34.07%), Postives = 72/135 (53.33%), Query Frame = 1
Query:  442 LADLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHW-ENQT-----IEWAMRLRVALYIAEALDY 828
            L D+  AT++FS   I+ + G      VYK  L       + +AVKK ++      ++F  E   +GK++H  L +L+GYC   +E+LLV EYM N +L     HW  NQT     ++W+ RL++A+  A  L +
Sbjct:  907 LGDIVEATDHFSKKNIIGDGGF---GTVYKACLP----GEKTVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLD----HWLRNQTGMLEVLDWSKRLKIAVGAARGLAF 1030          
The following BLAST results are available for this feature:
BLAST of CB293999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
Y1677_ARATH1.396e-1134.06Probable LRR receptor-like serine/threonine-protei... [more]
RKF3_ARATH1.396e-1131.94Probable LRR receptor-like serine/threonine-protei... [more]
CRK12_ARATH1.396e-1129.79Putative cysteine-rich receptor-like protein kinas... [more]
BRL3_ARATH1.396e-1132.59Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
Y1719_ARATH1.823e-1136.36Probable inactive receptor kinase At1g27190 OS=Ara... [more]
KPRO_MAIZE1.823e-1134.53Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
CRK5_ARATH1.823e-1130.94Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
GSO1_ARATH2.381e-1131.65LRR receptor-like serine/threonine-protein kinase ... [more]
BRI1_ARATH2.381e-1132.84Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
EXS_ARATH3.109e-1134.07Leucine-rich repeat receptor protein kinase EXS OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_05dc08_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05dc08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293999 ID=CB293999; Name=CB293999; organism=Citrus sinensis; type=EST; length=859bp
GCCCATTGAAAAAACCAAAAAAAAAAAAATGAAAAGAAAAAGAACCCTAG
TGCATATCTCCACTGATTAAATCTCTCTCTCTCTCTCTCTTTCACACTCA
CCCACACGAGCGCTTTCACTTGGACACAAACAAAAACTCTCTCTCGATAA
GAGAAAATAAAAAATTAAAAAGACGAAAACAAAACCAAACAGCTAATATT
ATTAGCTTCAGCTGCTGAGCTGGGGGGTTTGGTTGGTTCATTTCTTCTGA
GTCAACTCGGCCGAGTTATGGGCTGTTGCGAATCAACCTTCTTAAAAGGA
CACCTCTCGGTTGATACCAAAAATCGCCACCACCACCAACAGAATCACCG
CAATCATCCGACTCAGCCGTCTAATGGTACTGAGGGCTCAGGCGGACTCG
CTGCCGGCTCAGATGGCGCGCCGGCTTTCGCCGAGTTCTCCTTAGCCGAC
CTCAGAGCCGCTACGAATAACTTCAGTTCTGATTTTATCGTATCCGAGAG
CGGCGAAAAGGCTCCCAATGTCGTCTATAAAGGCCGCCTTCAAGACGGAA
ATGATAACCGCCGTTGGATCGCCGTTAAAAAATTCACCAAACATGCCTGG
CCCGATCCCAAACAGTTTGCTGATGAGGCTTGGGGTGTTGGGAAGCTGAG
GCATAAGAGGCTGGCGAATTTGATTGGCTATTGTTGTGATGGTGATGAGA
GATTGCTGGTGGCTGAGTACATGCCAAATGATACTCTTGCTAAACATTTA
TTTCACTGGGAGAATCAAACCATTGAGTGGGCTATGCGTCTAAGAGTTGC
TCTGTATATTGCTGAAGCTTTAGATTATTGCAGTAGTGAAAGACGTCCAT
TATACCATG
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